RNA–Protein interactions for RNA: ENST00000471126.1

CNOT3-206, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-206ENST00000471126 ZMYM4Q5VZL5 1548 aa25.24■■□□□ 1.63
CNOT3-206ENST00000471126 FER1L4A9Z1Z3 1794 aa25.23■■□□□ 1.63
CNOT3-206ENST00000471126 MAGI2Q86UL8 1455 aa25.23■■□□□ 1.63
CNOT3-206ENST00000471126 UHRF1BP1Q6BDS2 1440 aa25.23■■□□□ 1.63
CNOT3-206ENST00000471126 PLEKHD1A6NEE1 506 aa25.21■■□□□ 1.63
CNOT3-206ENST00000471126 ARHGEF12Q9NZN5 1544 aa25.21■■□□□ 1.63
CNOT3-206ENST00000471126 LTBP4Q8N2S1 1624 aa25.2■■□□□ 1.62
CNOT3-206ENST00000471126 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
CNOT3-206ENST00000471126 HECW1Q76N89 1606 aa25.15■■□□□ 1.62
CNOT3-206ENST00000471126 RAPGEF6Q8TEU7 1601 aa25.15■■□□□ 1.62
CNOT3-206ENST00000471126 ATP10AO60312 1499 aa25.15■■□□□ 1.62
CNOT3-206ENST00000471126 UBAP1LF5GYI3 381 aa25.13■■□□□ 1.61
CNOT3-206ENST00000471126 NUP153P49790 1475 aaKnown RBP25.13■■□□□ 1.61
CNOT3-206ENST00000471126 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
CNOT3-206ENST00000471126 C9orf84Q5VXU9 1444 aa25.11■■□□□ 1.61
CNOT3-206ENST00000471126 CFAP74Q9C0B2 1584 aa25.1■■□□□ 1.61
CNOT3-206ENST00000471126 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.1■■□□□ 1.61
CNOT3-206ENST00000471126 UBTFP17480 764 aaKnown RBP25.04■■□□□ 1.6
CNOT3-206ENST00000471126 SETD1BQ9UPS6 1966 aaKnown RBP25.01■■□□□ 1.59
CNOT3-206ENST00000471126 ZNF335Q9H4Z2 1342 aaPredicted RBP25■■□□□ 1.59
CNOT3-206ENST00000471126 NCOA1Q15788 1441 aa25■■□□□ 1.59
CNOT3-206ENST00000471126 ARHGAP35Q9NRY4 1499 aa24.99■■□□□ 1.59
CNOT3-206ENST00000471126 PLCH2O75038 1416 aa24.98■■□□□ 1.59
CNOT3-206ENST00000471126 RANGAP1P46060 587 aaPredicted RBP24.98■■□□□ 1.59
CNOT3-206ENST00000471126 TRAPPC8Q9Y2L5 1435 aa24.97■■□□□ 1.59
CNOT3-206ENST00000471126 ESF1Q9H501 851 aaKnown RBP24.95■■□□□ 1.58
CNOT3-206ENST00000471126 HSPA1LP34931 641 aa24.94■■□□□ 1.58
CNOT3-206ENST00000471126 EFCAB2Q5VUJ9 269 aa24.94■■□□□ 1.58
CNOT3-206ENST00000471126 MYT1LQ9UL68 1186 aa24.94■■□□□ 1.58
CNOT3-206ENST00000471126 NCKAP5LQ9HCH0 1330 aa24.93■■□□□ 1.58
CNOT3-206ENST00000471126 AFAP1Q8N556 730 aa24.93■■□□□ 1.58
CNOT3-206ENST00000471126 EHMT2Q96KQ7 1210 aa24.93■■□□□ 1.58
CNOT3-206ENST00000471126 MED1Q15648 1581 aaPredicted RBP24.89■■□□□ 1.58
CNOT3-206ENST00000471126 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
CNOT3-206ENST00000471126 C3P01024 1663 aa24.86■■□□□ 1.57
CNOT3-206ENST00000471126 PIP4K2BP78356 416 aa24.85■■□□□ 1.57
CNOT3-206ENST00000471126 PHF23Q9BUL5 403 aaPredicted RBP24.85■■□□□ 1.57
CNOT3-206ENST00000471126 CAMSAP1Q5T5Y3 1602 aa24.85■■□□□ 1.57
CNOT3-206ENST00000471126 FMN1Q68DA7 1419 aa24.84■■□□□ 1.57
CNOT3-206ENST00000471126 ZNF518AQ6AHZ1 1483 aa24.83■■□□□ 1.57
CNOT3-206ENST00000471126 CLIP1P30622 1438 aa24.79■■□□□ 1.56
CNOT3-206ENST00000471126 PKD2Q13563 968 aa24.78■■□□□ 1.56
CNOT3-206ENST00000471126 CDK13Q14004 1512 aaKnown RBP24.77■■□□□ 1.56
CNOT3-206ENST00000471126 DIP2CQ9Y2E4 1556 aa24.77■■□□□ 1.56
CNOT3-206ENST00000471126 KDM5CP41229 1560 aa24.76■■□□□ 1.55
CNOT3-206ENST00000471126 TOM1O60784 492 aa24.75■■□□□ 1.55
CNOT3-206ENST00000471126 CNTLNQ9NXG0 1405 aa24.75■■□□□ 1.55
CNOT3-206ENST00000471126 REREQ9P2R6 1566 aa24.75■■□□□ 1.55
CNOT3-206ENST00000471126 AGLP35573 1532 aa24.74■■□□□ 1.55
CNOT3-206ENST00000471126 NPATQ14207 1427 aa24.72■■□□□ 1.55
CNOT3-206ENST00000471126 PPP6R1Q9UPN7 881 aa24.72■■□□□ 1.55
CNOT3-206ENST00000471126 CEP162Q5TB80 1403 aa24.71■■□□□ 1.55
CNOT3-206ENST00000471126 ZMYM3Q14202 1370 aa24.7■■□□□ 1.55
CNOT3-206ENST00000471126 MLH3Q9UHC1 1453 aa24.7■■□□□ 1.54
CNOT3-206ENST00000471126 ATP1B4Q9UN42 357 aaPredicted RBP24.69■■□□□ 1.54
CNOT3-206ENST00000471126 CASKIN1Q8WXD9 1431 aa24.69■■□□□ 1.54
CNOT3-206ENST00000471126 ABCA6Q8N139 1617 aa24.68■■□□□ 1.54
CNOT3-206ENST00000471126 PLA2R1Q13018 1463 aa24.67■■□□□ 1.54
CNOT3-206ENST00000471126 LOC105371045A0A1W2PR82 267 aa24.67■■□□□ 1.54
CNOT3-206ENST00000471126 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
CNOT3-206ENST00000471126 ARHGAP5Q13017 1502 aa24.66■■□□□ 1.54
CNOT3-206ENST00000471126 TCOF1Q13428 1488 aaKnown RBP24.65■■□□□ 1.54
CNOT3-206ENST00000471126 MYO5CQ9NQX4 1742 aa24.64■■□□□ 1.54
CNOT3-206ENST00000471126 CDK11AQ9UQ88 783 aaPredicted RBP24.64■■□□□ 1.54
CNOT3-206ENST00000471126 FYCO1Q9BQS8 1478 aa24.64■■□□□ 1.53
CNOT3-206ENST00000471126 SENP3Q9H4L4 574 aaPredicted RBP24.59■■□□□ 1.53
CNOT3-206ENST00000471126 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.52
CNOT3-206ENST00000471126 KIF14Q15058 1648 aa24.57■■□□□ 1.52
CNOT3-206ENST00000471126 RGS17Q9UGC6 210 aaPredicted RBP24.55■■□□□ 1.52
CNOT3-206ENST00000471126 CPS1P31327 1500 aa24.53■■□□□ 1.52
CNOT3-206ENST00000471126 CEP170BQ9Y4F5 1589 aaPredicted RBP24.53■■□□□ 1.52
CNOT3-206ENST00000471126 TROQ12816 1431 aaPredicted RBP24.52■■□□□ 1.52
CNOT3-206ENST00000471126 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
CNOT3-206ENST00000471126 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
CNOT3-206ENST00000471126 MROH2AA6NES4 1674 aa24.51■■□□□ 1.51
CNOT3-206ENST00000471126 MYO3AQ8NEV4 1616 aa24.5■■□□□ 1.51
CNOT3-206ENST00000471126 ZNF142P52746 1687 aaPredicted RBP24.48■■□□□ 1.51
CNOT3-206ENST00000471126 KIDINS220Q9ULH0 1771 aa24.47■■□□□ 1.51
CNOT3-206ENST00000471126 ABCC1P33527 1531 aa24.45■■□□□ 1.51
CNOT3-206ENST00000471126 GGT6Q6P531 493 aa24.45■■□□□ 1.5
CNOT3-206ENST00000471126 VPS8Q8N3P4 1428 aa24.44■■□□□ 1.5
CNOT3-206ENST00000471126 ALKQ9UM73 1620 aa24.43■■□□□ 1.5
CNOT3-206ENST00000471126 SUPT6HQ7KZ85 1726 aaKnown RBP24.41■■□□□ 1.5
CNOT3-206ENST00000471126 A2ML1A8K2U0 1454 aa24.41■■□□□ 1.5
CNOT3-206ENST00000471126 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
CNOT3-206ENST00000471126 SPAG9O60271 1321 aaKnown RBP24.4■■□□□ 1.5
CNOT3-206ENST00000471126 CLTCQ00610 1675 aaKnown RBP24.4■■□□□ 1.5
CNOT3-206ENST00000471126 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
CNOT3-206ENST00000471126 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
CNOT3-206ENST00000471126 DNMT1P26358 1616 aaKnown RBP24.37■■□□□ 1.49
CNOT3-206ENST00000471126 POTEAQ6S8J7 498 aa24.37■■□□□ 1.49
CNOT3-206ENST00000471126 ANKLE2Q86XL3 938 aa24.36■■□□□ 1.49
CNOT3-206ENST00000471126 SAMD9LQ8IVG5 1584 aa24.35■■□□□ 1.49
CNOT3-206ENST00000471126 NEURL4Q96JN8 1562 aa24.35■■□□□ 1.49
CNOT3-206ENST00000471126 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.49
CNOT3-206ENST00000471126 VWDEQ8N2E2 1590 aa24.33■■□□□ 1.48
CNOT3-206ENST00000471126 MAP3K1Q13233 1512 aa24.32■■□□□ 1.48
CNOT3-206ENST00000471126 PREX2Q70Z35 1606 aa24.32■■□□□ 1.48
CNOT3-206ENST00000471126 FBXO31Q5XUX0 539 aaPredicted RBP24.31■■□□□ 1.48
CNOT3-206ENST00000471126 A2MP01023 1474 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms