RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 CLIP1P30622 1438 aa13.17□□□□□ -0.3
FDPS-209ENST00000471117 NEO1Q92859 1461 aa13.16□□□□□ -0.3
FDPS-209ENST00000471117 ZNF335Q9H4Z2 1342 aaPredicted RBP13.16□□□□□ -0.3
FDPS-209ENST00000471117 AKNAQ7Z591 1439 aa13.16□□□□□ -0.3
FDPS-209ENST00000471117 RANGAP1P46060 587 aaPredicted RBP13.16□□□□□ -0.3
FDPS-209ENST00000471117 ABCA9Q8IUA7 1624 aa13.16□□□□□ -0.3
FDPS-209ENST00000471117 RICTORQ6R327 1708 aa13.16□□□□□ -0.3
FDPS-209ENST00000471117 UGGT2Q9NYU1 1516 aa13.14□□□□□ -0.31
FDPS-209ENST00000471117 ABCA8O94911 1581 aa13.13□□□□□ -0.31
FDPS-209ENST00000471117 EFCAB5A4FU69 1503 aa13.12□□□□□ -0.31
FDPS-209ENST00000471117 DENND4BO75064 1496 aaPredicted RBP13.11□□□□□ -0.31
FDPS-209ENST00000471117 SENP3Q9H4L4 574 aaPredicted RBP13.11□□□□□ -0.31
FDPS-209ENST00000471117 ZFYVE16Q7Z3T8 1539 aa13.11□□□□□ -0.31
FDPS-209ENST00000471117 ARHGEF12Q9NZN5 1544 aa13.1□□□□□ -0.31
FDPS-209ENST00000471117 ARHGAP35Q9NRY4 1499 aa13.1□□□□□ -0.31
FDPS-209ENST00000471117 SAMD9Q5K651 1589 aa13.08□□□□□ -0.32
FDPS-209ENST00000471117 NCOA1Q15788 1441 aa13.08□□□□□ -0.32
FDPS-209ENST00000471117 RGS17Q9UGC6 210 aaPredicted RBP13.08□□□□□ -0.32
FDPS-209ENST00000471117 FHOD3Q2V2M9 1422 aa13.06□□□□□ -0.32
FDPS-209ENST00000471117 NCKAP5LQ9HCH0 1330 aa13.06□□□□□ -0.32
FDPS-209ENST00000471117 ATP10BO94823 1461 aa13.04□□□□□ -0.32
FDPS-209ENST00000471117 TOM1O60784 492 aa13.03□□□□□ -0.32
FDPS-209ENST00000471117 P3H3Q8IVL6 736 aa13.03□□□□□ -0.32
FDPS-209ENST00000471117 VPS8Q8N3P4 1428 aa13.03□□□□□ -0.32
FDPS-209ENST00000471117 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
FDPS-209ENST00000471117 C3P01024 1663 aa13.02□□□□□ -0.32
FDPS-209ENST00000471117 CAMSAP1Q5T5Y3 1602 aa13.02□□□□□ -0.33
FDPS-209ENST00000471117 HECW1Q76N89 1606 aa13.02□□□□□ -0.33
FDPS-209ENST00000471117 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
FDPS-209ENST00000471117 POTEAQ6S8J7 498 aa12.99□□□□□ -0.33
FDPS-209ENST00000471117 FMN1Q68DA7 1419 aa12.98□□□□□ -0.33
FDPS-209ENST00000471117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.98□□□□□ -0.33
FDPS-209ENST00000471117 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
FDPS-209ENST00000471117 PCGF6Q9BYE7 350 aa12.98□□□□□ -0.33
FDPS-209ENST00000471117 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
FDPS-209ENST00000471117 TRIM26Q12899 539 aaPredicted RBP12.97□□□□□ -0.33
FDPS-209ENST00000471117 PPARGC1BQ86YN6 1023 aaKnown RBP12.97□□□□□ -0.33
FDPS-209ENST00000471117 ATP10AO60312 1499 aa12.97□□□□□ -0.33
FDPS-209ENST00000471117 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.34
FDPS-209ENST00000471117 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.34
FDPS-209ENST00000471117 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
FDPS-209ENST00000471117 APLP2Q06481 763 aa12.92□□□□□ -0.34
FDPS-209ENST00000471117 SUPT6HQ7KZ85 1726 aaKnown RBP12.92□□□□□ -0.34
FDPS-209ENST00000471117 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
FDPS-209ENST00000471117 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
FDPS-209ENST00000471117 ESF1Q9H501 851 aaKnown RBP12.91□□□□□ -0.34
FDPS-209ENST00000471117 PPP6R1Q9UPN7 881 aa12.9□□□□□ -0.34
FDPS-209ENST00000471117 RAPGEF6Q8TEU7 1601 aa12.89□□□□□ -0.35
FDPS-209ENST00000471117 ALKQ9UM73 1620 aa12.89□□□□□ -0.35
FDPS-209ENST00000471117 ATP1B4Q9UN42 357 aaPredicted RBP12.89□□□□□ -0.35
FDPS-209ENST00000471117 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
FDPS-209ENST00000471117 PKD2Q13563 968 aa12.88□□□□□ -0.35
FDPS-209ENST00000471117 UPF1Q92900 1129 aaKnown RBP eCLIP12.86□□□□□ -0.35
FDPS-209ENST00000471117 MYT1LQ9UL68 1186 aa12.86□□□□□ -0.35
FDPS-209ENST00000471117 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
FDPS-209ENST00000471117 LRRIQ1Q96JM4 1722 aa12.85□□□□□ -0.35
FDPS-209ENST00000471117 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
FDPS-209ENST00000471117 TIAM1Q13009 1591 aa12.85□□□□□ -0.35
FDPS-209ENST00000471117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.84□□□□□ -0.356e-8■■■■□ 20.3
FDPS-209ENST00000471117 CCDC18Q5T9S5 1454 aa12.84□□□□□ -0.35
FDPS-209ENST00000471117 CPS1P31327 1500 aa12.83□□□□□ -0.35
FDPS-209ENST00000471117 NUP153P49790 1475 aaKnown RBP12.83□□□□□ -0.36
FDPS-209ENST00000471117 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
FDPS-209ENST00000471117 PLA2R1Q13018 1463 aa12.81□□□□□ -0.36
FDPS-209ENST00000471117 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
FDPS-209ENST00000471117 PLEKHD1A6NEE1 506 aa12.8□□□□□ -0.36
FDPS-209ENST00000471117 CDK13Q14004 1512 aaKnown RBP12.78□□□□□ -0.36
FDPS-209ENST00000471117 ZNF142P52746 1687 aaPredicted RBP12.78□□□□□ -0.36
FDPS-209ENST00000471117 DIP2CQ9Y2E4 1556 aa12.77□□□□□ -0.36
FDPS-209ENST00000471117 MYO3AQ8NEV4 1616 aa12.77□□□□□ -0.36
FDPS-209ENST00000471117 NPATQ14207 1427 aa12.77□□□□□ -0.37
FDPS-209ENST00000471117 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.37
FDPS-209ENST00000471117 CEP170BQ9Y4F5 1589 aaPredicted RBP12.77□□□□□ -0.37
FDPS-209ENST00000471117 KANK4Q5T7N3 995 aaPredicted RBP12.76□□□□□ -0.37
FDPS-209ENST00000471117 AFAP1Q8N556 730 aa12.76□□□□□ -0.37
FDPS-209ENST00000471117 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
FDPS-209ENST00000471117 CDK11AQ9UQ88 783 aaPredicted RBP12.75□□□□□ -0.37
FDPS-209ENST00000471117 SRCAPQ6ZRS2 3230 aa12.74□□□□□ -0.37
FDPS-209ENST00000471117 AGLP35573 1532 aa12.74□□□□□ -0.37
FDPS-209ENST00000471117 EHBP1L1Q8N3D4 1523 aa12.74□□□□□ -0.37
FDPS-209ENST00000471117 CNTLNQ9NXG0 1405 aa12.74□□□□□ -0.37
FDPS-209ENST00000471117 ZMYM3Q14202 1370 aa12.74□□□□□ -0.37
FDPS-209ENST00000471117 TRIM52Q96A61 297 aa12.74□□□□□ -0.37
FDPS-209ENST00000471117 ABCA6Q8N139 1617 aa12.73□□□□□ -0.37
FDPS-209ENST00000471117 POLR1AO95602 1720 aaPredicted RBP12.73□□□□□ -0.37
FDPS-209ENST00000471117 MROH2AA6NES4 1674 aa12.72□□□□□ -0.37
FDPS-209ENST00000471117 VWDEQ8N2E2 1590 aa12.72□□□□□ -0.37
FDPS-209ENST00000471117 PLCH2O75038 1416 aa12.71□□□□□ -0.37
FDPS-209ENST00000471117 REREQ9P2R6 1566 aa12.71□□□□□ -0.37
FDPS-209ENST00000471117 NEURL4Q96JN8 1562 aa12.7□□□□□ -0.38
FDPS-209ENST00000471117 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
FDPS-209ENST00000471117 ZNF518AQ6AHZ1 1483 aa12.7□□□□□ -0.38
FDPS-209ENST00000471117 STRCP1A6NGW2 1772 aa12.69□□□□□ -0.38
FDPS-209ENST00000471117 TROQ12816 1431 aaPredicted RBP12.69□□□□□ -0.38
FDPS-209ENST00000471117 RNF17Q9BXT8 1623 aaKnown RBP12.69□□□□□ -0.38
FDPS-209ENST00000471117 KDM5CP41229 1560 aa12.69□□□□□ -0.38
FDPS-209ENST00000471117 CLTCQ00610 1675 aaKnown RBP12.68□□□□□ -0.38
FDPS-209ENST00000471117 DNMT1P26358 1616 aaKnown RBP12.67□□□□□ -0.38
FDPS-209ENST00000471117 MYO5CQ9NQX4 1742 aa12.67□□□□□ -0.38
FDPS-209ENST00000471117 LRRC7Q96NW7 1537 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms