RNA–Protein interactions for RNA: ENST00000471060.1

RNF144A-206, Transcript of ring finger protein 144A, humanhuman

TSL 5

Gene RNF144A, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144A-206ENST00000471060 SPATA31D1Q6ZQQ2 1576 aa23.28■■□□□ 1.32
RNF144A-206ENST00000471060 ARHGEF12Q9NZN5 1544 aa23.28■■□□□ 1.32
RNF144A-206ENST00000471060 HECW1Q76N89 1606 aa23.27■■□□□ 1.32
RNF144A-206ENST00000471060 MLECQ14165 292 aa23.27■■□□□ 1.32
RNF144A-206ENST00000471060 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
RNF144A-206ENST00000471060 ATP10AO60312 1499 aa23.22■■□□□ 1.31
RNF144A-206ENST00000471060 STRCQ7RTU9 1775 aa23.22■■□□□ 1.31
RNF144A-206ENST00000471060 UHRF1BP1Q6BDS2 1440 aa23.21■■□□□ 1.31
RNF144A-206ENST00000471060 SCAPERQ9BY12 1400 aa23.19■■□□□ 1.3
RNF144A-206ENST00000471060 PTPRTO14522 1441 aa23.17■■□□□ 1.3
RNF144A-206ENST00000471060 PLCH2O75038 1416 aa23.16■■□□□ 1.3
RNF144A-206ENST00000471060 IQSEC2Q5JU85 1478 aa23.15■■□□□ 1.3
RNF144A-206ENST00000471060 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.29
RNF144A-206ENST00000471060 SETD1BQ9UPS6 1966 aaKnown RBP23.14■■□□□ 1.29
RNF144A-206ENST00000471060 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
RNF144A-206ENST00000471060 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.28
RNF144A-206ENST00000471060 ZNF518AQ6AHZ1 1483 aa23.07■■□□□ 1.28
RNF144A-206ENST00000471060 EFCAB2Q5VUJ9 269 aa23.07■■□□□ 1.28
RNF144A-206ENST00000471060 REREQ9P2R6 1566 aa23.03■■□□□ 1.28
RNF144A-206ENST00000471060 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
RNF144A-206ENST00000471060 CDK13Q14004 1512 aaKnown RBP23.03■■□□□ 1.28
RNF144A-206ENST00000471060 KDM5CP41229 1560 aa23.02■■□□□ 1.28
RNF144A-206ENST00000471060 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
RNF144A-206ENST00000471060 TRAPPC8Q9Y2L5 1435 aa22.99■■□□□ 1.27
RNF144A-206ENST00000471060 C3P01024 1663 aa22.99■■□□□ 1.27
RNF144A-206ENST00000471060 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
RNF144A-206ENST00000471060 EEA1Q15075 1411 aa22.97■■□□□ 1.27
RNF144A-206ENST00000471060 DIP2CQ9Y2E4 1556 aa22.97■■□□□ 1.27
RNF144A-206ENST00000471060 AGLP35573 1532 aa22.95■■□□□ 1.26
RNF144A-206ENST00000471060 ESF1Q9H501 851 aaKnown RBP22.95■■□□□ 1.26
RNF144A-206ENST00000471060 AFAP1Q8N556 730 aa22.94■■□□□ 1.26
RNF144A-206ENST00000471060 CDK11AQ9UQ88 783 aaPredicted RBP22.93■■□□□ 1.26
RNF144A-206ENST00000471060 MLH3Q9UHC1 1453 aa22.92■■□□□ 1.26
RNF144A-206ENST00000471060 CNTLNQ9NXG0 1405 aa22.92■■□□□ 1.26
RNF144A-206ENST00000471060 MYT1LQ9UL68 1186 aa22.92■■□□□ 1.26
RNF144A-206ENST00000471060 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
RNF144A-206ENST00000471060 KIF14Q15058 1648 aa22.9■■□□□ 1.26
RNF144A-206ENST00000471060 ABCA6Q8N139 1617 aa22.89■■□□□ 1.25
RNF144A-206ENST00000471060 NPATQ14207 1427 aa22.87■■□□□ 1.25
RNF144A-206ENST00000471060 FMN1Q68DA7 1419 aa22.87■■□□□ 1.25
RNF144A-206ENST00000471060 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
RNF144A-206ENST00000471060 TROQ12816 1431 aaPredicted RBP22.86■■□□□ 1.25
RNF144A-206ENST00000471060 UBAP1LF5GYI3 381 aa22.85■■□□□ 1.25
RNF144A-206ENST00000471060 CLIP1P30622 1438 aa22.84■■□□□ 1.25
RNF144A-206ENST00000471060 ZNF335Q9H4Z2 1342 aaPredicted RBP22.81■■□□□ 1.24
RNF144A-206ENST00000471060 MROH2AA6NES4 1674 aa22.81■■□□□ 1.24
RNF144A-206ENST00000471060 ATP1B4Q9UN42 357 aaPredicted RBP22.8■■□□□ 1.24
RNF144A-206ENST00000471060 PKD2Q13563 968 aa22.79■■□□□ 1.24
RNF144A-206ENST00000471060 PLA2R1Q13018 1463 aa22.79■■□□□ 1.24
RNF144A-206ENST00000471060 ABCC1P33527 1531 aa22.78■■□□□ 1.24
RNF144A-206ENST00000471060 CDC42BPBQ9Y5S2 1711 aa22.76■■□□□ 1.23
RNF144A-206ENST00000471060 NCKAP5LQ9HCH0 1330 aa22.75■■□□□ 1.23
RNF144A-206ENST00000471060 ZMYM3Q14202 1370 aa22.75■■□□□ 1.23
RNF144A-206ENST00000471060 PREX2Q70Z35 1606 aa22.74■■□□□ 1.23
RNF144A-206ENST00000471060 KIDINS220Q9ULH0 1771 aa22.73■■□□□ 1.23
RNF144A-206ENST00000471060 ZNF142P52746 1687 aaPredicted RBP22.73■■□□□ 1.23
RNF144A-206ENST00000471060 ITSN2Q9NZM3 1697 aa22.73■■□□□ 1.23
RNF144A-206ENST00000471060 TCOF1Q13428 1488 aaKnown RBP22.73■■□□□ 1.23
RNF144A-206ENST00000471060 MED1Q15648 1581 aaPredicted RBP22.71■■□□□ 1.23
RNF144A-206ENST00000471060 MYO3AQ8NEV4 1616 aa22.69■■□□□ 1.22
RNF144A-206ENST00000471060 ARHGAP35Q9NRY4 1499 aa22.68■■□□□ 1.22
RNF144A-206ENST00000471060 CEP170BQ9Y4F5 1589 aaPredicted RBP22.67■■□□□ 1.22
RNF144A-206ENST00000471060 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
RNF144A-206ENST00000471060 SAMD9LQ8IVG5 1584 aa22.64■■□□□ 1.22
RNF144A-206ENST00000471060 HSPA1LP34931 641 aa22.64■■□□□ 1.21
RNF144A-206ENST00000471060 SUPT6HQ7KZ85 1726 aaKnown RBP22.63■■□□□ 1.21
RNF144A-206ENST00000471060 PTPRKQ15262 1439 aa22.63■■□□□ 1.21
RNF144A-206ENST00000471060 TOM1O60784 492 aa22.62■■□□□ 1.21
RNF144A-206ENST00000471060 LRRIQ1Q96JM4 1722 aa22.61■■□□□ 1.21
RNF144A-206ENST00000471060 CLTCQ00610 1675 aaKnown RBP22.6■■□□□ 1.21
RNF144A-206ENST00000471060 CPS1P31327 1500 aa22.6■■□□□ 1.21
RNF144A-206ENST00000471060 CCDC18Q5T9S5 1454 aa22.6■■□□□ 1.21
RNF144A-206ENST00000471060 SPAG9O60271 1321 aaKnown RBP22.59■■□□□ 1.21
RNF144A-206ENST00000471060 SCAF1Q9H7N4 1312 aaKnown RBP22.59■■□□□ 1.21
RNF144A-206ENST00000471060 UBTFP17480 764 aaKnown RBP22.59■■□□□ 1.21
RNF144A-206ENST00000471060 PLXNC1O60486 1568 aa22.58■■□□□ 1.2
RNF144A-206ENST00000471060 CDC42BPAQ5VT25 1732 aa22.57■■□□□ 1.2
RNF144A-206ENST00000471060 PIP4K2BP78356 416 aa22.57■■□□□ 1.2
RNF144A-206ENST00000471060 A2ML1A8K2U0 1454 aa22.55■■□□□ 1.2
RNF144A-206ENST00000471060 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
RNF144A-206ENST00000471060 ATP7AQ04656 1500 aa22.55■■□□□ 1.2
RNF144A-206ENST00000471060 A2MP01023 1474 aa22.54■■□□□ 1.2
RNF144A-206ENST00000471060 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
RNF144A-206ENST00000471060 DNMT1P26358 1616 aaKnown RBP22.52■■□□□ 1.2
RNF144A-206ENST00000471060 SHANK2Q9UPX8 1470 aa22.52■■□□□ 1.2
RNF144A-206ENST00000471060 INO80Q9ULG1 1556 aaPredicted RBP22.51■■□□□ 1.19
RNF144A-206ENST00000471060 CASKIN1Q8WXD9 1431 aa22.51■■□□□ 1.19
RNF144A-206ENST00000471060 KIAA1107Q9UPP5 1409 aa22.51■■□□□ 1.19
RNF144A-206ENST00000471060 PLEKHH2Q8IVE3 1493 aa22.5■■□□□ 1.19
RNF144A-206ENST00000471060 ZNF777Q9ULD5 760 aaPredicted RBP22.5■■□□□ 1.19
RNF144A-206ENST00000471060 GGT6Q6P531 493 aa22.49■■□□□ 1.19
RNF144A-206ENST00000471060 POLR1AO95602 1720 aaPredicted RBP22.48■■□□□ 1.19
RNF144A-206ENST00000471060 NEURL4Q96JN8 1562 aa22.47■■□□□ 1.19
RNF144A-206ENST00000471060 HNRNPMP52272 730 aaKnown RBP eCLIP22.47■■□□□ 1.19
RNF144A-206ENST00000471060 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
RNF144A-206ENST00000471060 ADGBQ8N7X0 1667 aa22.42■■□□□ 1.18
RNF144A-206ENST00000471060 EHMT2Q96KQ7 1210 aa22.41■■□□□ 1.18
RNF144A-206ENST00000471060 ALKQ9UM73 1620 aa22.41■■□□□ 1.18
RNF144A-206ENST00000471060 VWDEQ8N2E2 1590 aa22.41■■□□□ 1.18
RNF144A-206ENST00000471060 TNRQ92752 1358 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms