RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
LDHB-206ENST00000470985 TRPC6Q9Y210 931 aa14.01□□□□□ -0.17
LDHB-206ENST00000470985 KDM6BO15054 1643 aa14.01□□□□□ -0.17
LDHB-206ENST00000470985 CHRM1P11229 460 aaPredicted RBP14□□□□□ -0.17
LDHB-206ENST00000470985 DISP3Q9P2K9 1392 aa13.99□□□□□ -0.17
LDHB-206ENST00000470985 WIZO95785 1651 aa13.98□□□□□ -0.17
LDHB-206ENST00000470985 MAMSTRQ6ZN01 415 aa13.97□□□□□ -0.17
LDHB-206ENST00000470985 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
LDHB-206ENST00000470985 CHMP7Q8WUX9 453 aaPredicted RBP13.95□□□□□ -0.18
LDHB-206ENST00000470985 PCDHB8Q9UN66 801 aa13.95□□□□□ -0.18
LDHB-206ENST00000470985 GOLGA2Q08379 1002 aa13.94□□□□□ -0.18
LDHB-206ENST00000470985 IER5LQ5T953 404 aa13.94□□□□□ -0.18
LDHB-206ENST00000470985 FAM69CQ0P6D2 419 aa13.93□□□□□ -0.18
LDHB-206ENST00000470985 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
LDHB-206ENST00000470985 ABCC10Q5T3U5 1492 aa13.9□□□□□ -0.18
LDHB-206ENST00000470985 SCUBE2Q9NQ36 999 aa13.89□□□□□ -0.19
LDHB-206ENST00000470985 DNMBPQ6XZF7 1577 aa13.88□□□□□ -0.19
LDHB-206ENST00000470985 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
LDHB-206ENST00000470985 PRDM2Q13029 1718 aa13.87□□□□□ -0.19
LDHB-206ENST00000470985 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
LDHB-206ENST00000470985 PLCG2P16885 1265 aa13.86□□□□□ -0.19
LDHB-206ENST00000470985 DIP2BQ9P265 1576 aa13.85□□□□□ -0.19
LDHB-206ENST00000470985 POTEB2H3BUK9 544 aa13.85□□□□□ -0.19
LDHB-206ENST00000470985 MAGI1Q96QZ7 1491 aaPredicted RBP13.85□□□□□ -0.19
LDHB-206ENST00000470985 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
LDHB-206ENST00000470985 PSEN1P49768 467 aa13.83□□□□□ -0.2
LDHB-206ENST00000470985 PDAP1Q13442 181 aaKnown RBP13.83□□□□□ -0.2
LDHB-206ENST00000470985 ABCC8Q09428 1581 aa13.83□□□□□ -0.2
LDHB-206ENST00000470985 OTUD5Q96G74 571 aa13.82□□□□□ -0.2
LDHB-206ENST00000470985 OCEL1Q9H607 264 aa13.78□□□□□ -0.2
LDHB-206ENST00000470985 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
LDHB-206ENST00000470985 COLQQ9Y215 455 aaPredicted RBP13.77□□□□□ -0.21
LDHB-206ENST00000470985 TSPOAP1O95153 1857 aa13.76□□□□□ -0.21
LDHB-206ENST00000470985 SPATA31D1Q6ZQQ2 1576 aa13.76□□□□□ -0.21
LDHB-206ENST00000470985 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
LDHB-206ENST00000470985 MAPKBP1O60336 1514 aa13.74□□□□□ -0.21
LDHB-206ENST00000470985 SOGA1O94964 1423 aa13.73□□□□□ -0.21
LDHB-206ENST00000470985 TAOK2Q9UL54 1235 aa13.73□□□□□ -0.21
LDHB-206ENST00000470985 POTEFA5A3E0 1075 aa13.71□□□□□ -0.21
LDHB-206ENST00000470985 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
LDHB-206ENST00000470985 IRX5P78411 483 aaPredicted RBP13.69□□□□□ -0.22
LDHB-206ENST00000470985 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
LDHB-206ENST00000470985 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
LDHB-206ENST00000470985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.67□□□□□ -0.22
LDHB-206ENST00000470985 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
LDHB-206ENST00000470985 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
LDHB-206ENST00000470985 SHROOM2Q13796 1616 aa13.65□□□□□ -0.22
LDHB-206ENST00000470985 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
LDHB-206ENST00000470985 L3MBTL3Q96JM7 780 aaPredicted RBP13.64□□□□□ -0.23
LDHB-206ENST00000470985 G3V3G9 751 aa13.63□□□□□ -0.23
LDHB-206ENST00000470985 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
LDHB-206ENST00000470985 PBRM1Q86U86 1689 aa13.6□□□□□ -0.23
LDHB-206ENST00000470985 VGFO15240 615 aaPredicted RBP13.6□□□□□ -0.23
LDHB-206ENST00000470985 NUP160Q12769 1436 aa13.6□□□□□ -0.23
LDHB-206ENST00000470985 PPRC1Q5VV67 1664 aaKnown RBP13.59□□□□□ -0.23
LDHB-206ENST00000470985 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
LDHB-206ENST00000470985 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
LDHB-206ENST00000470985 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
LDHB-206ENST00000470985 GRIN2AQ12879 1464 aa13.59□□□□□ -0.23
LDHB-206ENST00000470985 ADCY10Q96PN6 1610 aa13.58□□□□□ -0.24
LDHB-206ENST00000470985 CERKQ8TCT0 537 aa13.58□□□□□ -0.24
LDHB-206ENST00000470985 TOP2BQ02880 1626 aa13.57□□□□□ -0.24
LDHB-206ENST00000470985 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
LDHB-206ENST00000470985 C3orf67Q6ZVT6 689 aa13.56□□□□□ -0.24
LDHB-206ENST00000470985 PRG4Q92954 1404 aaPredicted RBP13.56□□□□□ -0.24
LDHB-206ENST00000470985 FAM163AQ96GL9 167 aaPredicted RBP13.55□□□□□ -0.24
LDHB-206ENST00000470985 PDCD7Q8N8D1 485 aaKnown RBP13.51□□□□□ -0.25
LDHB-206ENST00000470985 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
LDHB-206ENST00000470985 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
LDHB-206ENST00000470985 PCF11O94913 1555 aaKnown RBP13.49□□□□□ -0.25
LDHB-206ENST00000470985 SNPHO15079 494 aa13.48□□□□□ -0.25
LDHB-206ENST00000470985 SOX12O15370 315 aa13.48□□□□□ -0.25
LDHB-206ENST00000470985 EFCAB3Q8N7B9 438 aa13.48□□□□□ -0.25
LDHB-206ENST00000470985 ADAMTS12P58397 1594 aa13.46□□□□□ -0.25
LDHB-206ENST00000470985 RNF25Q96BH1 459 aaPredicted RBP13.46□□□□□ -0.25
LDHB-206ENST00000470985 ABCA5Q8WWZ7 1642 aa13.46□□□□□ -0.26
LDHB-206ENST00000470985 PTPRMP28827 1452 aa13.44□□□□□ -0.26
LDHB-206ENST00000470985 BOLA1Q9Y3E2 137 aa13.44□□□□□ -0.26
LDHB-206ENST00000470985 CUX1P39880 1505 aa13.43□□□□□ -0.26
LDHB-206ENST00000470985 STK25O00506 426 aa13.42□□□□□ -0.26
LDHB-206ENST00000470985 STK24Q9Y6E0 443 aa13.42□□□□□ -0.26
LDHB-206ENST00000470985 POTEMA6NI47 508 aa13.41□□□□□ -0.26
LDHB-206ENST00000470985 GLI2P10070 1586 aa13.41□□□□□ -0.26
LDHB-206ENST00000470985 PKD2Q13563 968 aa13.4□□□□□ -0.26
LDHB-206ENST00000470985 JPH4Q96JJ6 628 aa13.4□□□□□ -0.26
LDHB-206ENST00000470985 BCL11BQ9C0K0 894 aaPredicted RBP13.4□□□□□ -0.26
LDHB-206ENST00000470985 KIF21BO75037 1637 aa13.39□□□□□ -0.27
LDHB-206ENST00000470985 HSPA2P54652 639 aa13.39□□□□□ -0.27
LDHB-206ENST00000470985 POTEGQ6S5H5 508 aa13.39□□□□□ -0.27
LDHB-206ENST00000470985 DPY19L2Q6NUT2 758 aa13.38□□□□□ -0.27
LDHB-206ENST00000470985 NLRP6P59044 892 aa13.36□□□□□ -0.27
LDHB-206ENST00000470985 ASXL2Q76L83 1435 aa13.36□□□□□ -0.27
LDHB-206ENST00000470985 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
LDHB-206ENST00000470985 RGL2O15211 777 aa13.33□□□□□ -0.28
LDHB-206ENST00000470985 PCDH10Q9P2E7 1040 aa13.33□□□□□ -0.28
LDHB-206ENST00000470985 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
LDHB-206ENST00000470985 MAP3K4Q9Y6R4 1608 aa13.31□□□□□ -0.28
LDHB-206ENST00000470985 ADAMTSL3P82987 1691 aa13.31□□□□□ -0.28
LDHB-206ENST00000470985 TEX14Q8IWB6 1497 aa13.31□□□□□ -0.28
LDHB-206ENST00000470985 RUSC2Q8N2Y8 1516 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms