RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.42
UBE3C-205ENST00000470408 IFT140Q96RY7 1462 aa12.4□□□□□ -0.42
UBE3C-205ENST00000470408 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.42
UBE3C-205ENST00000470408 HNRNPMP52272 730 aaKnown RBP eCLIP12.4□□□□□ -0.431e-6■■■□□ 17
UBE3C-205ENST00000470408 UACAQ9BZF9 1416 aa12.39□□□□□ -0.43
UBE3C-205ENST00000470408 PLEKHG5O94827 1062 aa12.37□□□□□ -0.43
UBE3C-205ENST00000470408 MORC1Q86VD1 984 aa12.36□□□□□ -0.43
UBE3C-205ENST00000470408 STAC3Q96MF2 364 aa12.35□□□□□ -0.43
UBE3C-205ENST00000470408 RAB3GAP2Q9H2M9 1393 aa12.35□□□□□ -0.43
UBE3C-205ENST00000470408 RAD54L2Q9Y4B4 1467 aa12.35□□□□□ -0.43
UBE3C-205ENST00000470408 CC2D2AQ9P2K1 1620 aa12.34□□□□□ -0.43
UBE3C-205ENST00000470408 DDRGK1Q96HY6 314 aa12.34□□□□□ -0.43
UBE3C-205ENST00000470408 TERF2IPQ9NYB0 399 aa12.34□□□□□ -0.43
UBE3C-205ENST00000470408 ROCK2O75116 1388 aaKnown RBP12.33□□□□□ -0.44
UBE3C-205ENST00000470408 CALD1Q05682 793 aaKnown RBP12.33□□□□□ -0.44
UBE3C-205ENST00000470408 FTSJ3Q8IY81 847 aaKnown RBP12.33□□□□□ -0.44
UBE3C-205ENST00000470408 U2SURPO15042 1029 aaKnown RBP12.32□□□□□ -0.44
UBE3C-205ENST00000470408 MYOM3Q5VTT5 1437 aa12.32□□□□□ -0.44
UBE3C-205ENST00000470408 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
UBE3C-205ENST00000470408 STK26Q9P289 416 aa12.31□□□□□ -0.44
UBE3C-205ENST00000470408 AQRO60306 1485 aaKnown RBP eCLIP12.31□□□□□ -0.448e-7■■■□□ 17.7
UBE3C-205ENST00000470408 KTN1Q86UP2 1357 aaKnown RBP12.3□□□□□ -0.44
UBE3C-205ENST00000470408 RALBP1Q15311 655 aa12.3□□□□□ -0.44
UBE3C-205ENST00000470408 CCER2I3L3R5 266 aa12.29□□□□□ -0.44
UBE3C-205ENST00000470408 CASC1Q6TDU7 716 aa12.29□□□□□ -0.44
UBE3C-205ENST00000470408 CUX1P39880 1505 aa12.29□□□□□ -0.44
UBE3C-205ENST00000470408 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
UBE3C-205ENST00000470408 FAM69CQ0P6D2 419 aa12.28□□□□□ -0.44
UBE3C-205ENST00000470408 CC2D1BQ5T0F9 858 aaKnown RBP12.28□□□□□ -0.44
UBE3C-205ENST00000470408 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
UBE3C-205ENST00000470408 ARXQ96QS3 562 aa12.28□□□□□ -0.44
UBE3C-205ENST00000470408 HSPA5P11021 654 aaKnown RBP12.28□□□□□ -0.44
UBE3C-205ENST00000470408 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.27□□□□□ -0.44
UBE3C-205ENST00000470408 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.45
UBE3C-205ENST00000470408 SYNJ2O15056 1496 aa12.26□□□□□ -0.45
UBE3C-205ENST00000470408 NPHP1O15259 732 aa12.26□□□□□ -0.45
UBE3C-205ENST00000470408 LAS1LQ9Y4W2 734 aaKnown RBP12.26□□□□□ -0.45
UBE3C-205ENST00000470408 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.458e-7■■□□□ 14.3
UBE3C-205ENST00000470408 TNNT2P45379 298 aaPredicted RBP12.25□□□□□ -0.45
UBE3C-205ENST00000470408 NEUROD2Q15784 382 aa12.25□□□□□ -0.45
UBE3C-205ENST00000470408 TOPBP1Q92547 1522 aa12.25□□□□□ -0.45
UBE3C-205ENST00000470408 BECN1Q14457 450 aa12.24□□□□□ -0.45
UBE3C-205ENST00000470408 RUSC2Q8N2Y8 1516 aa12.24□□□□□ -0.45
UBE3C-205ENST00000470408 CASKIN1Q8WXD9 1431 aa12.24□□□□□ -0.45
UBE3C-205ENST00000470408 LAMC3Q9Y6N6 1575 aa12.23□□□□□ -0.45
UBE3C-205ENST00000470408 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
UBE3C-205ENST00000470408 HDAC5Q9UQL6 1122 aa12.23□□□□□ -0.45
UBE3C-205ENST00000470408 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
UBE3C-205ENST00000470408 CSB-PGBD3P0DP91 1061 aa12.22□□□□□ -0.45
UBE3C-205ENST00000470408 NGDNQ8NEJ9 315 aaKnown RBP12.22□□□□□ -0.45
UBE3C-205ENST00000470408 EFCAB5A4FU69 1503 aa12.22□□□□□ -0.45
UBE3C-205ENST00000470408 PRG4Q92954 1404 aaPredicted RBP12.22□□□□□ -0.45
UBE3C-205ENST00000470408 PLEKHH2Q8IVE3 1493 aa12.22□□□□□ -0.45
UBE3C-205ENST00000470408 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
UBE3C-205ENST00000470408 ERICH6BQ5W0A0 696 aa12.21□□□□□ -0.45
UBE3C-205ENST00000470408 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.45
UBE3C-205ENST00000470408 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.45
UBE3C-205ENST00000470408 FOXD1Q16676 465 aa12.21□□□□□ -0.45
UBE3C-205ENST00000470408 FYCO1Q9BQS8 1478 aa12.2□□□□□ -0.46
UBE3C-205ENST00000470408 LMOD3Q0VAK6 560 aa12.2□□□□□ -0.46
UBE3C-205ENST00000470408 IRX6P78412 446 aaPredicted RBP12.19□□□□□ -0.46
UBE3C-205ENST00000470408 PHLDB1Q86UU1 1377 aa12.19□□□□□ -0.46
UBE3C-205ENST00000470408 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
UBE3C-205ENST00000470408 KIF21BO75037 1637 aa12.19□□□□□ -0.46
UBE3C-205ENST00000470408 NESP48681 1621 aa12.18□□□□□ -0.46
UBE3C-205ENST00000470408 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
UBE3C-205ENST00000470408 TRIM44Q96DX7 344 aaPredicted RBP12.18□□□□□ -0.46
UBE3C-205ENST00000470408 EVC2Q86UK5 1308 aa12.17□□□□□ -0.46
UBE3C-205ENST00000470408 FGD6Q6ZV73 1430 aa12.17□□□□□ -0.46
UBE3C-205ENST00000470408 OS9Q13438 667 aaPredicted RBP12.17□□□□□ -0.46
UBE3C-205ENST00000470408 TOP2BQ02880 1626 aa12.17□□□□□ -0.46
UBE3C-205ENST00000470408 SOX12O15370 315 aa12.17□□□□□ -0.46
UBE3C-205ENST00000470408 KIF15Q9NS87 1388 aa12.17□□□□□ -0.46
UBE3C-205ENST00000470408 NOP58Q9Y2X3 529 aaKnown RBP12.16□□□□□ -0.46
UBE3C-205ENST00000470408 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
UBE3C-205ENST00000470408 NCLP19338 710 aaKnown RBP12.16□□□□□ -0.46
UBE3C-205ENST00000470408 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
UBE3C-205ENST00000470408 PPP4R2Q9NY27 417 aa12.16□□□□□ -0.46
UBE3C-205ENST00000470408 GOLGA2Q08379 1002 aa12.15□□□□□ -0.46
UBE3C-205ENST00000470408 FRAT1Q92837 279 aaPredicted RBP12.15□□□□□ -0.46
UBE3C-205ENST00000470408 GOLGA6L22H0YM25 854 aa12.15□□□□□ -0.47
UBE3C-205ENST00000470408 NLRP13Q86W25 1043 aa12.14□□□□□ -0.47
UBE3C-205ENST00000470408 KIAA0586Q9BVV6 1533 aa12.13□□□□□ -0.47
UBE3C-205ENST00000470408 AMPHP49418 695 aa12.13□□□□□ -0.47
UBE3C-205ENST00000470408 SNAPC4Q5SXM2 1469 aa12.13□□□□□ -0.47
UBE3C-205ENST00000470408 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
UBE3C-205ENST00000470408 LRRC9Q6ZRR7 1453 aa12.13□□□□□ -0.47
UBE3C-205ENST00000470408 TRAK1Q9UPV9 953 aa12.12□□□□□ -0.47
UBE3C-205ENST00000470408 PRXQ9BXM0 1461 aa12.12□□□□□ -0.47
UBE3C-205ENST00000470408 PRDM2Q13029 1718 aa12.12□□□□□ -0.47
UBE3C-205ENST00000470408 ANKRD50Q9ULJ7 1429 aa12.11□□□□□ -0.47
UBE3C-205ENST00000470408 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
UBE3C-205ENST00000470408 ARHGAP5Q13017 1502 aa12.11□□□□□ -0.47
UBE3C-205ENST00000470408 STK31Q9BXU1 1019 aa12.11□□□□□ -0.47
UBE3C-205ENST00000470408 MIA2Q96PC5 1412 aa12.11□□□□□ -0.47
UBE3C-205ENST00000470408 CGNL1Q0VF96 1302 aa12.1□□□□□ -0.47
UBE3C-205ENST00000470408 PDE3BQ13370 1112 aa12.1□□□□□ -0.47
UBE3C-205ENST00000470408 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
UBE3C-205ENST00000470408 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
UBE3C-205ENST00000470408 DHX57Q6P158 1386 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms