RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
CCDC171-204ENST00000470191 YEATS2Q9ULM3 1422 aa15.44■□□□□ 0.06
CCDC171-204ENST00000470191 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
CCDC171-204ENST00000470191 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
CCDC171-204ENST00000470191 EFCAB5A4FU69 1503 aa15.43■□□□□ 0.06
CCDC171-204ENST00000470191 CERKQ8TCT0 537 aa15.42■□□□□ 0.06
CCDC171-204ENST00000470191 ZMYM4Q5VZL5 1548 aa15.41■□□□□ 0.06
CCDC171-204ENST00000470191 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
CCDC171-204ENST00000470191 PREX1Q8TCU6 1659 aa15.38■□□□□ 0.05
CCDC171-204ENST00000470191 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
CCDC171-204ENST00000470191 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
CCDC171-204ENST00000470191 SCAPERQ9BY12 1400 aa15.36■□□□□ 0.05
CCDC171-204ENST00000470191 MYO5CQ9NQX4 1742 aa15.36■□□□□ 0.05
CCDC171-204ENST00000470191 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
CCDC171-204ENST00000470191 MAGI2Q86UL8 1455 aa15.33■□□□□ 0.05
CCDC171-204ENST00000470191 STRCQ7RTU9 1775 aa15.32■□□□□ 0.04
CCDC171-204ENST00000470191 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
CCDC171-204ENST00000470191 DISP3Q9P2K9 1392 aa15.32■□□□□ 0.04
CCDC171-204ENST00000470191 ATP10AO60312 1499 aa15.31■□□□□ 0.04
CCDC171-204ENST00000470191 ARHGEF12Q9NZN5 1544 aa15.31■□□□□ 0.04
CCDC171-204ENST00000470191 PLCH2O75038 1416 aa15.3■□□□□ 0.04
CCDC171-204ENST00000470191 C9orf84Q5VXU9 1444 aa15.3■□□□□ 0.04
CCDC171-204ENST00000470191 KIF14Q15058 1648 aa15.29■□□□□ 0.04
CCDC171-204ENST00000470191 ILDR2Q71H61 639 aa15.29■□□□□ 0.04
CCDC171-204ENST00000470191 EEA1Q15075 1411 aa15.27■□□□□ 0.04
CCDC171-204ENST00000470191 EFCAB2Q5VUJ9 269 aa15.27■□□□□ 0.04
CCDC171-204ENST00000470191 C3P01024 1663 aa15.25■□□□□ 0.03
CCDC171-204ENST00000470191 ARHGAP5Q13017 1502 aa15.25■□□□□ 0.03
CCDC171-204ENST00000470191 UHRF1BP1Q6BDS2 1440 aa15.25■□□□□ 0.03
CCDC171-204ENST00000470191 LRRIQ1Q96JM4 1722 aa15.24■□□□□ 0.03
CCDC171-204ENST00000470191 AFAP1Q8N556 730 aa15.24■□□□□ 0.03
CCDC171-204ENST00000470191 DIP2CQ9Y2E4 1556 aa15.23■□□□□ 0.03
CCDC171-204ENST00000470191 ZNF518AQ6AHZ1 1483 aa15.22■□□□□ 0.03
CCDC171-204ENST00000470191 ABCA6Q8N139 1617 aa15.22■□□□□ 0.03
CCDC171-204ENST00000470191 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
CCDC171-204ENST00000470191 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
CCDC171-204ENST00000470191 SPATA31D1Q6ZQQ2 1576 aa15.21■□□□□ 0.03
CCDC171-204ENST00000470191 UBTFP17480 764 aaKnown RBP15.21■□□□□ 0.03
CCDC171-204ENST00000470191 SETD1BQ9UPS6 1966 aaKnown RBP15.21■□□□□ 0.03
CCDC171-204ENST00000470191 KDM5CP41229 1560 aa15.19■□□□□ 0.02
CCDC171-204ENST00000470191 SOCS7O14512 581 aa15.19■□□□□ 0.02
CCDC171-204ENST00000470191 ESF1Q9H501 851 aaKnown RBP15.19■□□□□ 0.02
CCDC171-204ENST00000470191 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
CCDC171-204ENST00000470191 FMN1Q68DA7 1419 aa15.17■□□□□ 0.02
CCDC171-204ENST00000470191 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
CCDC171-204ENST00000470191 ARHGAP35Q9NRY4 1499 aa15.16■□□□□ 0.02
CCDC171-204ENST00000470191 CLIP1P30622 1438 aa15.16■□□□□ 0.02
CCDC171-204ENST00000470191 TROQ12816 1431 aaPredicted RBP15.16■□□□□ 0.02
CCDC171-204ENST00000470191 PREX2Q70Z35 1606 aa15.14■□□□□ 0.01
CCDC171-204ENST00000470191 PTPRTO14522 1441 aa15.14■□□□□ 0.01
CCDC171-204ENST00000470191 SUPT6HQ7KZ85 1726 aaKnown RBP15.13■□□□□ 0.01
CCDC171-204ENST00000470191 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
CCDC171-204ENST00000470191 KIDINS220Q9ULH0 1771 aa15.13■□□□□ 0.01
CCDC171-204ENST00000470191 LTBP4Q8N2S1 1624 aa15.13■□□□□ 0.01
CCDC171-204ENST00000470191 TRAPPC8Q9Y2L5 1435 aa15.12■□□□□ 0.01
CCDC171-204ENST00000470191 ABCC1P33527 1531 aa15.12■□□□□ 0.01
CCDC171-204ENST00000470191 CDC42BPAQ5VT25 1732 aa15.12■□□□□ 0.01
CCDC171-204ENST00000470191 MLH3Q9UHC1 1453 aa15.1■□□□□ 0.01
CCDC171-204ENST00000470191 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
CCDC171-204ENST00000470191 AGLP35573 1532 aa15.08■□□□□ 0.01
CCDC171-204ENST00000470191 ZNF777Q9ULD5 760 aaPredicted RBP15.08■□□□□ 0
CCDC171-204ENST00000470191 CLTCQ00610 1675 aaKnown RBP15.08■□□□□ 0
CCDC171-204ENST00000470191 NCOA1Q15788 1441 aa15.08■□□□□ 0
CCDC171-204ENST00000470191 NCKAP5LQ9HCH0 1330 aa15.07■□□□□ 0
CCDC171-204ENST00000470191 MROH2AA6NES4 1674 aa15.06■□□□□ 0
CCDC171-204ENST00000470191 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
CCDC171-204ENST00000470191 CNTLNQ9NXG0 1405 aa15.04■□□□□ -0
CCDC171-204ENST00000470191 ZNF335Q9H4Z2 1342 aaPredicted RBP15.03■□□□□ -0
CCDC171-204ENST00000470191 UBAP1LF5GYI3 381 aa15.03■□□□□ -0
CCDC171-204ENST00000470191 MYO3AQ8NEV4 1616 aa15.03■□□□□ -0
CCDC171-204ENST00000470191 SYCP2Q9BX26 1530 aa15.02■□□□□ -0
CCDC171-204ENST00000470191 IQSEC2Q5JU85 1478 aa15.02■□□□□ -0
CCDC171-204ENST00000470191 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
CCDC171-204ENST00000470191 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCDC171-204ENST00000470191 ZMYM3Q14202 1370 aa15□□□□□ -0.01
CCDC171-204ENST00000470191 CACNB1Q02641 598 aaPredicted RBP15□□□□□ -0.01
CCDC171-204ENST00000470191 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
CCDC171-204ENST00000470191 SPAG9O60271 1321 aaKnown RBP14.99□□□□□ -0.01
CCDC171-204ENST00000470191 NPATQ14207 1427 aa14.99□□□□□ -0.01
CCDC171-204ENST00000470191 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
CCDC171-204ENST00000470191 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
CCDC171-204ENST00000470191 CASKIN1Q8WXD9 1431 aa14.98□□□□□ -0.01
CCDC171-204ENST00000470191 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
CCDC171-204ENST00000470191 GGT6Q6P531 493 aa14.97□□□□□ -0.01
CCDC171-204ENST00000470191 INO80Q9ULG1 1556 aaPredicted RBP14.95□□□□□ -0.02
CCDC171-204ENST00000470191 A2MP01023 1474 aa14.94□□□□□ -0.02
CCDC171-204ENST00000470191 GPATCH8Q9UKJ3 1502 aaKnown RBP14.93□□□□□ -0.02
CCDC171-204ENST00000470191 PIP4K2BP78356 416 aa14.93□□□□□ -0.02
CCDC171-204ENST00000470191 PLXNC1O60486 1568 aa14.93□□□□□ -0.02
CCDC171-204ENST00000470191 ADGBQ8N7X0 1667 aa14.93□□□□□ -0.02
CCDC171-204ENST00000470191 PTPRKQ15262 1439 aa14.92□□□□□ -0.02
CCDC171-204ENST00000470191 POLR1AO95602 1720 aaPredicted RBP14.92□□□□□ -0.02
CCDC171-204ENST00000470191 PKD2Q13563 968 aa14.92□□□□□ -0.02
CCDC171-204ENST00000470191 FYCO1Q9BQS8 1478 aa14.92□□□□□ -0.02
CCDC171-204ENST00000470191 PLA2R1Q13018 1463 aa14.91□□□□□ -0.02
CCDC171-204ENST00000470191 CFDP1Q9UEE9 299 aaPredicted RBP14.91□□□□□ -0.02
CCDC171-204ENST00000470191 TCOF1Q13428 1488 aaKnown RBP14.9□□□□□ -0.02
CCDC171-204ENST00000470191 DNMT1P26358 1616 aaKnown RBP14.9□□□□□ -0.02
CCDC171-204ENST00000470191 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
CCDC171-204ENST00000470191 MED1Q15648 1581 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms