RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 JPH4Q96JJ6 628 aa28.52■■■□□ 2.16
CDHR3-207ENST00000470188 DENND4BO75064 1496 aaPredicted RBP28.52■■■□□ 2.16
CDHR3-207ENST00000470188 ABCC5O15440 1437 aa28.51■■■□□ 2.15
CDHR3-207ENST00000470188 PRG4Q92954 1404 aaPredicted RBP28.51■■■□□ 2.15
CDHR3-207ENST00000470188 HIRIP3Q9BW71 556 aaPredicted RBP28.5■■■□□ 2.15
CDHR3-207ENST00000470188 ZNF644Q9H582 1327 aaPredicted RBP28.49■■■□□ 2.15
CDHR3-207ENST00000470188 KDM5BQ9UGL1 1544 aa28.48■■■□□ 2.15
CDHR3-207ENST00000470188 MPHOSPH9Q99550 1183 aa28.47■■■□□ 2.15
CDHR3-207ENST00000470188 ITSN2Q9NZM3 1697 aa28.42■■■□□ 2.14
CDHR3-207ENST00000470188 ADCY10Q96PN6 1610 aa28.42■■■□□ 2.14
CDHR3-207ENST00000470188 CFDP1Q9UEE9 299 aaPredicted RBP28.4■■■□□ 2.14
CDHR3-207ENST00000470188 CAMSAP2Q08AD1 1489 aa28.4■■■□□ 2.14
CDHR3-207ENST00000470188 KIF14Q15058 1648 aa28.39■■■□□ 2.13
CDHR3-207ENST00000470188 GPATCH8Q9UKJ3 1502 aaKnown RBP28.39■■■□□ 2.13
CDHR3-207ENST00000470188 KCNH8Q96L42 1107 aa28.38■■■□□ 2.13
CDHR3-207ENST00000470188 ABCA8O94911 1581 aa28.35■■■□□ 2.13
CDHR3-207ENST00000470188 CHD1O14646 1710 aa28.32■■■□□ 2.12
CDHR3-207ENST00000470188 FOXD1Q16676 465 aa28.31■■■□□ 2.12
CDHR3-207ENST00000470188 PLEKHD1A6NEE1 506 aa28.28■■■□□ 2.12
CDHR3-207ENST00000470188 ZNF777Q9ULD5 760 aaPredicted RBP28.28■■■□□ 2.12
CDHR3-207ENST00000470188 ANKRD30BQ9BXX2 1392 aa28.28■■■□□ 2.12
CDHR3-207ENST00000470188 ANP32CO43423 234 aa28.28■■■□□ 2.12
CDHR3-207ENST00000470188 ADGBQ8N7X0 1667 aa28.28■■■□□ 2.12
CDHR3-207ENST00000470188 ATP10BO94823 1461 aa28.27■■■□□ 2.12
CDHR3-207ENST00000470188 NCOA1Q15788 1441 aa28.27■■■□□ 2.12
CDHR3-207ENST00000470188 TSHZ2Q9NRE2 1034 aa28.26■■■□□ 2.11
CDHR3-207ENST00000470188 SLC4A1APQ9BWU0 796 aaKnown RBP28.25■■■□□ 2.11
CDHR3-207ENST00000470188 CROCC2H7BZ55 1655 aa28.25■■■□□ 2.11
CDHR3-207ENST00000470188 ADGRL2O95490 1459 aa28.24■■■□□ 2.11
CDHR3-207ENST00000470188 L3MBTL2Q969R5 705 aa28.24■■■□□ 2.11
CDHR3-207ENST00000470188 RPRD2Q5VT52 1461 aaKnown RBP28.24■■■□□ 2.11
CDHR3-207ENST00000470188 CCER2I3L3R5 266 aa28.24■■■□□ 2.11
CDHR3-207ENST00000470188 ABCC10Q5T3U5 1492 aa28.21■■■□□ 2.11
CDHR3-207ENST00000470188 HSPA5P11021 654 aaKnown RBP28.2■■■□□ 2.1
CDHR3-207ENST00000470188 CDC42BPAQ5VT25 1732 aa28.19■■■□□ 2.1
CDHR3-207ENST00000470188 ANKRD30AQ9BXX3 1397 aa28.18■■■□□ 2.1
CDHR3-207ENST00000470188 PZPP20742 1482 aa28.18■■■□□ 2.1
CDHR3-207ENST00000470188 PTPRGP23470 1445 aa28.18■■■□□ 2.1
CDHR3-207ENST00000470188 EIF4G2P78344 907 aaKnown RBP eCLIP28.16■■■□□ 2.1
CDHR3-207ENST00000470188 TEX14Q8IWB6 1497 aa28.16■■■□□ 2.1
CDHR3-207ENST00000470188 ANP32EQ9BTT0 268 aa28.13■■■□□ 2.09
CDHR3-207ENST00000470188 SHANK2Q9UPX8 1470 aa28.12■■■□□ 2.09
CDHR3-207ENST00000470188 WASHC2AQ641Q2 1341 aa28.1■■■□□ 2.09
CDHR3-207ENST00000470188 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
CDHR3-207ENST00000470188 C9orf84Q5VXU9 1444 aa28.08■■■□□ 2.09
CDHR3-207ENST00000470188 KIAA1107Q9UPP5 1409 aa28.07■■■□□ 2.08
CDHR3-207ENST00000470188 NBPF8Q3BBV2 869 aa28.06■■■□□ 2.08
CDHR3-207ENST00000470188 TSPY4P0CV99 314 aa28.02■■■□□ 2.08
CDHR3-207ENST00000470188 TSPY10P0CW01 314 aa28.02■■■□□ 2.08
CDHR3-207ENST00000470188 SHROOM2Q13796 1616 aa28.01■■■□□ 2.07
CDHR3-207ENST00000470188 PKD2Q13563 968 aa28■■■□□ 2.07
CDHR3-207ENST00000470188 ARHGEF5Q12774 1597 aa28■■■□□ 2.07
CDHR3-207ENST00000470188 CLASP1Q7Z460 1538 aa27.99■■■□□ 2.07
CDHR3-207ENST00000470188 HNRNPMP52272 730 aaKnown RBP eCLIP27.97■■■□□ 2.07
CDHR3-207ENST00000470188 MBD5Q9P267 1494 aa27.96■■■□□ 2.07
CDHR3-207ENST00000470188 PREX2Q70Z35 1606 aa27.95■■■□□ 2.07
CDHR3-207ENST00000470188 CNTLNQ9NXG0 1405 aa27.95■■■□□ 2.06
CDHR3-207ENST00000470188 NUP155O75694 1391 aa27.95■■■□□ 2.06
CDHR3-207ENST00000470188 CCDC7Q96M83 1385 aa27.95■■■□□ 2.06
CDHR3-207ENST00000470188 KIF15Q9NS87 1388 aa27.93■■■□□ 2.06
CDHR3-207ENST00000470188 SAMD9LQ8IVG5 1584 aa27.93■■■□□ 2.06
CDHR3-207ENST00000470188 SPATA31E1Q6ZUB1 1445 aa27.92■■■□□ 2.06
CDHR3-207ENST00000470188 CDC42BPBQ9Y5S2 1711 aa27.92■■■□□ 2.06
CDHR3-207ENST00000470188 KDM5DQ9BY66 1539 aa27.92■■■□□ 2.06
CDHR3-207ENST00000470188 CCDC141Q6ZP82 1450 aa27.92■■■□□ 2.06
CDHR3-207ENST00000470188 C11orf95C9JLR9 678 aaPredicted RBP27.92■■■□□ 2.06
CDHR3-207ENST00000470188 RSPH4AQ5TD94 716 aa27.87■■■□□ 2.05
CDHR3-207ENST00000470188 ABCC2Q92887 1545 aa27.87■■■□□ 2.05
CDHR3-207ENST00000470188 ERCC6L2Q5T890 1561 aa27.87■■■□□ 2.05
CDHR3-207ENST00000470188 FKBP8Q14318 412 aa27.86■■■□□ 2.05
CDHR3-207ENST00000470188 TTC37Q6PGP7 1564 aa27.85■■■□□ 2.05
CDHR3-207ENST00000470188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.83■■■□□ 2.05
CDHR3-207ENST00000470188 ARHGAP5Q13017 1502 aa27.82■■■□□ 2.04
CDHR3-207ENST00000470188 OSCARQ8IYS5 282 aa27.82■■■□□ 2.04
CDHR3-207ENST00000470188 KIF7Q2M1P5 1343 aa27.82■■■□□ 2.04
CDHR3-207ENST00000470188 POLR1AO95602 1720 aaPredicted RBP27.81■■■□□ 2.04
CDHR3-207ENST00000470188 SYCP2Q9BX26 1530 aa27.81■■■□□ 2.04
CDHR3-207ENST00000470188 NEFLP07196 543 aa27.8■■■□□ 2.04
CDHR3-207ENST00000470188 ZNF326Q5BKZ1 582 aaKnown RBP27.8■■■□□ 2.04
CDHR3-207ENST00000470188 BCANQ96GW7 911 aa27.77■■■□□ 2.04
CDHR3-207ENST00000470188 UHRF1BP1Q6BDS2 1440 aa27.77■■■□□ 2.04
CDHR3-207ENST00000470188 USP47Q96K76 1375 aa27.76■■■□□ 2.03
CDHR3-207ENST00000470188 ARHGEF12Q9NZN5 1544 aa27.76■■■□□ 2.03
CDHR3-207ENST00000470188 MAST1Q9Y2H9 1570 aa27.76■■■□□ 2.03
CDHR3-207ENST00000470188 PRKRIP1Q9H875 184 aaPredicted RBP27.75■■■□□ 2.03
CDHR3-207ENST00000470188 MYO5CQ9NQX4 1742 aa27.74■■■□□ 2.03
CDHR3-207ENST00000470188 FAM135AQ9P2D6 1515 aa27.74■■■□□ 2.03
CDHR3-207ENST00000470188 PLEKHH2Q8IVE3 1493 aa27.73■■■□□ 2.03
CDHR3-207ENST00000470188 HNRNPUQ00839 825 aaKnown RBP eCLIP27.72■■■□□ 2.03
CDHR3-207ENST00000470188 RALGAPBQ86X10 1494 aa27.71■■■□□ 2.03
CDHR3-207ENST00000470188 KDM5CP41229 1560 aa27.7■■■□□ 2.02
CDHR3-207ENST00000470188 UHRF1BP1LA0JNW5 1464 aa27.67■■■□□ 2.02
CDHR3-207ENST00000470188 ZCCHC11Q5TAX3 1644 aaKnown RBP27.67■■■□□ 2.02
CDHR3-207ENST00000470188 CCDC184Q52MB2 194 aa27.66■■■□□ 2.02
CDHR3-207ENST00000470188 RBM19Q9Y4C8 960 aaKnown RBP27.66■■■□□ 2.02
CDHR3-207ENST00000470188 UNC13BO14795 1591 aa27.66■■■□□ 2.02
CDHR3-207ENST00000470188 PLXNC1O60486 1568 aa27.66■■■□□ 2.02
CDHR3-207ENST00000470188 BCORL1Q5H9F3 1711 aa27.65■■■□□ 2.02
CDHR3-207ENST00000470188 PLCH2O75038 1416 aa27.63■■■□□ 2.01
CDHR3-207ENST00000470188 ARID4BQ4LE39 1312 aaPredicted RBP27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms