RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
USP11-206ENST00000469080 NCOA2Q15596 1464 aa16.97■□□□□ 0.31
USP11-206ENST00000469080 HSPA5P11021 654 aaKnown RBP16.95■□□□□ 0.3
USP11-206ENST00000469080 PKD2Q13563 968 aa16.93■□□□□ 0.3
USP11-206ENST00000469080 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
USP11-206ENST00000469080 PTPRKQ15262 1439 aa16.93■□□□□ 0.3
USP11-206ENST00000469080 CCDC18Q5T9S5 1454 aa16.92■□□□□ 0.3
USP11-206ENST00000469080 EIF4G3O43432 1585 aaKnown RBP16.92■□□□□ 0.3
USP11-206ENST00000469080 EIF4G2P78344 907 aaKnown RBP eCLIP16.91■□□□□ 0.3
USP11-206ENST00000469080 PRG4Q92954 1404 aaPredicted RBP16.91■□□□□ 0.3
USP11-206ENST00000469080 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
USP11-206ENST00000469080 CHGAP10645 457 aaKnown RBP16.88■□□□□ 0.29
USP11-206ENST00000469080 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
USP11-206ENST00000469080 CUL7Q14999 1698 aa16.86■□□□□ 0.29
USP11-206ENST00000469080 PLB1Q6P1J6 1458 aa16.85■□□□□ 0.29
USP11-206ENST00000469080 PBRM1Q86U86 1689 aa16.85■□□□□ 0.29
USP11-206ENST00000469080 DCAF11Q8TEB1 546 aa16.85■□□□□ 0.29
USP11-206ENST00000469080 MRS2Q9HD23 443 aa16.83■□□□□ 0.29
USP11-206ENST00000469080 GRIN2AQ12879 1464 aa16.83■□□□□ 0.28
USP11-206ENST00000469080 ADAMTS12P58397 1594 aa16.81■□□□□ 0.28
USP11-206ENST00000469080 NUP155O75694 1391 aa16.8■□□□□ 0.28
USP11-206ENST00000469080 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
USP11-206ENST00000469080 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
USP11-206ENST00000469080 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
USP11-206ENST00000469080 FANCIQ9NVI1 1328 aa16.78■□□□□ 0.28
USP11-206ENST00000469080 SYNJ2O15056 1496 aa16.78■□□□□ 0.28
USP11-206ENST00000469080 EPRSP07814 1512 aaKnown RBP16.78■□□□□ 0.28
USP11-206ENST00000469080 NAIPQ13075 1403 aa16.77■□□□□ 0.28
USP11-206ENST00000469080 NBPF8Q3BBV2 869 aa16.77■□□□□ 0.28
USP11-206ENST00000469080 CARD11Q9BXL7 1154 aa16.77■□□□□ 0.28
USP11-206ENST00000469080 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
USP11-206ENST00000469080 PTPRGP23470 1445 aa16.75■□□□□ 0.27
USP11-206ENST00000469080 EFCAB5A4FU69 1503 aa16.75■□□□□ 0.27
USP11-206ENST00000469080 MAGI1Q96QZ7 1491 aaPredicted RBP16.75■□□□□ 0.27
USP11-206ENST00000469080 IQGAP2Q13576 1575 aa16.75■□□□□ 0.27
USP11-206ENST00000469080 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
USP11-206ENST00000469080 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
USP11-206ENST00000469080 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
USP11-206ENST00000469080 KIAA0586Q9BVV6 1533 aa16.72■□□□□ 0.27
USP11-206ENST00000469080 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
USP11-206ENST00000469080 CTTNBP2Q8WZ74 1663 aa16.7■□□□□ 0.26
USP11-206ENST00000469080 MAGI3Q5TCQ9 1506 aa16.69■□□□□ 0.26
USP11-206ENST00000469080 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
USP11-206ENST00000469080 WASHC2AQ641Q2 1341 aa16.68■□□□□ 0.26
USP11-206ENST00000469080 HFM1A2PYH4 1435 aa16.67■□□□□ 0.26
USP11-206ENST00000469080 AFAP1Q8N556 730 aa16.67■□□□□ 0.26
USP11-206ENST00000469080 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
USP11-206ENST00000469080 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
USP11-206ENST00000469080 VSIG10Q8N0Z9 540 aa16.65■□□□□ 0.26
USP11-206ENST00000469080 TMC1Q8TDI8 760 aa16.65■□□□□ 0.26
USP11-206ENST00000469080 CC2D1BQ5T0F9 858 aaKnown RBP16.64■□□□□ 0.25
USP11-206ENST00000469080 GLIPR1L2Q4G1C9 344 aa16.64■□□□□ 0.25
USP11-206ENST00000469080 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
USP11-206ENST00000469080 ST20-MTHFSA0A0A6YYL1 179 aa16.63■□□□□ 0.25
USP11-206ENST00000469080 PTPN23Q9H3S7 1636 aa16.63■□□□□ 0.25
USP11-206ENST00000469080 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
USP11-206ENST00000469080 ANKRD30AQ9BXX3 1397 aa16.62■□□□□ 0.25
USP11-206ENST00000469080 DISP1Q96F81 1524 aa16.62■□□□□ 0.25
USP11-206ENST00000469080 GGT6Q6P531 493 aa16.62■□□□□ 0.25
USP11-206ENST00000469080 EHBP1L1Q8N3D4 1523 aa16.61■□□□□ 0.25
USP11-206ENST00000469080 NOP58Q9Y2X3 529 aaKnown RBP16.61■□□□□ 0.25
USP11-206ENST00000469080 NUP160Q12769 1436 aa16.61■□□□□ 0.25
USP11-206ENST00000469080 A0A0U1RQG5 324 aaPredicted RBP16.61■□□□□ 0.25
USP11-206ENST00000469080 NUP153P49790 1475 aaKnown RBP16.6■□□□□ 0.25
USP11-206ENST00000469080 ABCC5O15440 1437 aa16.59■□□□□ 0.25
USP11-206ENST00000469080 DAPK1P53355 1430 aa16.59■□□□□ 0.25
USP11-206ENST00000469080 ZMYND15Q9H091 742 aa16.59■□□□□ 0.25
USP11-206ENST00000469080 OSCARQ8IYS5 282 aa16.58■□□□□ 0.25
USP11-206ENST00000469080 MAP3K1Q13233 1512 aa16.58■□□□□ 0.24
USP11-206ENST00000469080 KIF3BO15066 747 aa16.58■□□□□ 0.24
USP11-206ENST00000469080 HECW1Q76N89 1606 aa16.57■□□□□ 0.24
USP11-206ENST00000469080 NBPF1Q3BBV0 1214 aa16.57■□□□□ 0.24
USP11-206ENST00000469080 TROQ12816 1431 aaPredicted RBP16.56■□□□□ 0.24
USP11-206ENST00000469080 KIF15Q9NS87 1388 aa16.56■□□□□ 0.24
USP11-206ENST00000469080 SAFB2Q14151 953 aaKnown RBP eCLIP16.56■□□□□ 0.24
USP11-206ENST00000469080 SAMD9Q5K651 1589 aa16.55■□□□□ 0.24
USP11-206ENST00000469080 CHD1O14646 1710 aa16.55■□□□□ 0.24
USP11-206ENST00000469080 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
USP11-206ENST00000469080 TNNT2P45379 298 aaPredicted RBP16.55■□□□□ 0.24
USP11-206ENST00000469080 UGGT2Q9NYU1 1516 aa16.54■□□□□ 0.24
USP11-206ENST00000469080 CFAP43Q8NDM7 1665 aa16.54■□□□□ 0.24
USP11-206ENST00000469080 PAK3O75914 559 aaPredicted RBP16.54■□□□□ 0.24
USP11-206ENST00000469080 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
USP11-206ENST00000469080 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
USP11-206ENST00000469080 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
USP11-206ENST00000469080 MLECQ14165 292 aa16.53■□□□□ 0.24
USP11-206ENST00000469080 KDM6BO15054 1643 aa16.52■□□□□ 0.24
USP11-206ENST00000469080 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
USP11-206ENST00000469080 B4GALNT3Q6L9W6 998 aa16.51■□□□□ 0.23
USP11-206ENST00000469080 KIAA0556O60303 1618 aa16.51■□□□□ 0.23
USP11-206ENST00000469080 PRKRIP1Q9H875 184 aaPredicted RBP16.5■□□□□ 0.23
USP11-206ENST00000469080 ROCK2O75116 1388 aaKnown RBP16.49■□□□□ 0.23
USP11-206ENST00000469080 SPAG9O60271 1321 aaKnown RBP16.48■□□□□ 0.23
USP11-206ENST00000469080 CAMSAP2Q08AD1 1489 aa16.48■□□□□ 0.23
USP11-206ENST00000469080 USP47Q96K76 1375 aa16.48■□□□□ 0.23
USP11-206ENST00000469080 ATP10BO94823 1461 aa16.47■□□□□ 0.23
USP11-206ENST00000469080 CCER2I3L3R5 266 aa16.46■□□□□ 0.23
USP11-206ENST00000469080 GPATCH8Q9UKJ3 1502 aaKnown RBP16.46■□□□□ 0.23
USP11-206ENST00000469080 C9orf84Q5VXU9 1444 aa16.46■□□□□ 0.23
USP11-206ENST00000469080 MIA2Q96PC5 1412 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms