RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 ST18O60284 1047 aa18.01■□□□□ 0.47
CKAP2-205ENST00000468284 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
CKAP2-205ENST00000468284 SNPHO15079 494 aa17.98■□□□□ 0.47
CKAP2-205ENST00000468284 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
CKAP2-205ENST00000468284 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.97■□□□□ 0.47
CKAP2-205ENST00000468284 G3V3G9 751 aa17.97■□□□□ 0.47
CKAP2-205ENST00000468284 ZFP91Q96JP5 570 aaPredicted RBP17.97■□□□□ 0.47
CKAP2-205ENST00000468284 WDR62O43379 1518 aa17.97■□□□□ 0.47
CKAP2-205ENST00000468284 BOLA1Q9Y3E2 137 aa17.95■□□□□ 0.46
CKAP2-205ENST00000468284 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
CKAP2-205ENST00000468284 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
CKAP2-205ENST00000468284 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
CKAP2-205ENST00000468284 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
CKAP2-205ENST00000468284 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
CKAP2-205ENST00000468284 TMEM121BQ9BXQ6 578 aaPredicted RBP17.86■□□□□ 0.45
CKAP2-205ENST00000468284 TAOK2Q9UL54 1235 aa17.86■□□□□ 0.45
CKAP2-205ENST00000468284 MROH2BQ7Z745 1585 aa17.86■□□□□ 0.45
CKAP2-205ENST00000468284 SOX12O15370 315 aa17.85■□□□□ 0.45
CKAP2-205ENST00000468284 ECM2O94769 699 aaPredicted RBP17.85■□□□□ 0.45
CKAP2-205ENST00000468284 CDAN1Q8IWY9 1227 aa17.8■□□□□ 0.44
CKAP2-205ENST00000468284 BCL11BQ9C0K0 894 aaPredicted RBP17.79■□□□□ 0.44
CKAP2-205ENST00000468284 PHF8Q9UPP1 1060 aa17.78■□□□□ 0.44
CKAP2-205ENST00000468284 PKD2Q13563 968 aa17.77■□□□□ 0.44
CKAP2-205ENST00000468284 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
CKAP2-205ENST00000468284 MS4A4AQ96JQ5 239 aa17.75■□□□□ 0.43
CKAP2-205ENST00000468284 STK24Q9Y6E0 443 aa17.75■□□□□ 0.43
CKAP2-205ENST00000468284 MARVELD3Q96A59 401 aa17.74■□□□□ 0.43
CKAP2-205ENST00000468284 MICALL2Q8IY33 904 aa17.73■□□□□ 0.43
CKAP2-205ENST00000468284 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
CKAP2-205ENST00000468284 ARHGEF11O15085 1522 aa17.72■□□□□ 0.43
CKAP2-205ENST00000468284 STK25O00506 426 aa17.7■□□□□ 0.42
CKAP2-205ENST00000468284 RGL2O15211 777 aa17.69■□□□□ 0.42
CKAP2-205ENST00000468284 CYB5RLQ6IPT4 315 aa17.68■□□□□ 0.42
CKAP2-205ENST00000468284 NLRP6P59044 892 aa17.67■□□□□ 0.42
CKAP2-205ENST00000468284 EMP3P54852 163 aa17.65■□□□□ 0.42
CKAP2-205ENST00000468284 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
CKAP2-205ENST00000468284 HOXB3P14651 431 aaPredicted RBP17.63■□□□□ 0.41
CKAP2-205ENST00000468284 WIZO95785 1651 aa17.62■□□□□ 0.41
CKAP2-205ENST00000468284 FBXO22Q8NEZ5 403 aa17.62■□□□□ 0.41
CKAP2-205ENST00000468284 TMEM92Q6UXU6 159 aa17.6■□□□□ 0.41
CKAP2-205ENST00000468284 MFRPQ9BY79 579 aa17.6■□□□□ 0.41
CKAP2-205ENST00000468284 ZNF608Q9ULD9 1512 aaPredicted RBP17.58■□□□□ 0.41
CKAP2-205ENST00000468284 DOK7Q18PE1 504 aa17.58■□□□□ 0.4
CKAP2-205ENST00000468284 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
CKAP2-205ENST00000468284 CFTRP13569 1480 aa17.56■□□□□ 0.4
CKAP2-205ENST00000468284 ARAP1Q96P48 1450 aa17.52■□□□□ 0.4
CKAP2-205ENST00000468284 FAM205CA6NFA0 338 aa17.52■□□□□ 0.4
CKAP2-205ENST00000468284 HS3ST6Q96QI5 342 aa17.51■□□□□ 0.39
CKAP2-205ENST00000468284 RIMBP2O15034 1052 aa17.49■□□□□ 0.39
CKAP2-205ENST00000468284 HOXB1P14653 301 aaPredicted RBP17.49■□□□□ 0.39
CKAP2-205ENST00000468284 POTEB3A0JP26 581 aa17.46■□□□□ 0.39
CKAP2-205ENST00000468284 POTEBQ6S5H4 581 aa17.46■□□□□ 0.39
CKAP2-205ENST00000468284 IFT140Q96RY7 1462 aa17.42■□□□□ 0.38
CKAP2-205ENST00000468284 CHD1O14646 1710 aa17.39■□□□□ 0.37
CKAP2-205ENST00000468284 ZSWIM6Q9HCJ5 1215 aa17.39■□□□□ 0.37
CKAP2-205ENST00000468284 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
CKAP2-205ENST00000468284 ERBB3P21860 1342 aa17.36■□□□□ 0.37
CKAP2-205ENST00000468284 SPNS2Q8IVW8 549 aa17.35■□□□□ 0.37
CKAP2-205ENST00000468284 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.372e-9■■■■■ 27.7
CKAP2-205ENST00000468284 HS6ST3Q8IZP7 471 aa17.33■□□□□ 0.36
CKAP2-205ENST00000468284 KRTAP3-3Q9BYR6 98 aa17.33■□□□□ 0.36
CKAP2-205ENST00000468284 KRTAP3-2Q9BYR7 98 aa17.33■□□□□ 0.36
CKAP2-205ENST00000468284 TOPBP1Q92547 1522 aa17.31■□□□□ 0.36
CKAP2-205ENST00000468284 GPR153Q6NV75 609 aa17.31■□□□□ 0.36
CKAP2-205ENST00000468284 C2orf72A6NCS6 295 aa17.3■□□□□ 0.36
CKAP2-205ENST00000468284 KIF3CO14782 793 aa17.3■□□□□ 0.36
CKAP2-205ENST00000468284 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
CKAP2-205ENST00000468284 PPP1R37O75864 691 aa17.28■□□□□ 0.36
CKAP2-205ENST00000468284 MMRN1Q13201 1228 aa17.28■□□□□ 0.36
CKAP2-205ENST00000468284 VARS2Q5ST30 1063 aaKnown RBP17.27■□□□□ 0.36
CKAP2-205ENST00000468284 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
CKAP2-205ENST00000468284 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
CKAP2-205ENST00000468284 CHGAP10645 457 aaKnown RBP17.25■□□□□ 0.35
CKAP2-205ENST00000468284 ARSIQ5FYB1 569 aa17.24■□□□□ 0.35
CKAP2-205ENST00000468284 TMC2Q8TDI7 906 aa17.23■□□□□ 0.35
CKAP2-205ENST00000468284 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
CKAP2-205ENST00000468284 KHSRPQ92945 711 aaKnown RBP eCLIP17.18■□□□□ 0.34
CKAP2-205ENST00000468284 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
CKAP2-205ENST00000468284 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
CKAP2-205ENST00000468284 CCDC88BA6NC98 1476 aa17.13■□□□□ 0.33
CKAP2-205ENST00000468284 ZNF687Q8N1G0 1237 aa17.12■□□□□ 0.33
CKAP2-205ENST00000468284 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
CKAP2-205ENST00000468284 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
CKAP2-205ENST00000468284 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
CKAP2-205ENST00000468284 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
CKAP2-205ENST00000468284 SLC34A2O95436 690 aa17.1■□□□□ 0.33
CKAP2-205ENST00000468284 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
CKAP2-205ENST00000468284 SNAPC4Q5SXM2 1469 aa17.09■□□□□ 0.33
CKAP2-205ENST00000468284 NKX1-1Q15270 411 aaPredicted RBP17.08■□□□□ 0.32
CKAP2-205ENST00000468284 PCDHGA4Q9Y5G9 962 aa17.07■□□□□ 0.32
CKAP2-205ENST00000468284 NUDT7P0C024 238 aa17.06■□□□□ 0.32
CKAP2-205ENST00000468284 CHMP7Q8WUX9 453 aaPredicted RBP17.04■□□□□ 0.32
CKAP2-205ENST00000468284 SYNJ1O43426 1573 aa17.03■□□□□ 0.32
CKAP2-205ENST00000468284 RYDENQ9NUL5 291 aaKnown RBP17.03■□□□□ 0.32
CKAP2-205ENST00000468284 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
CKAP2-205ENST00000468284 SOGA1O94964 1423 aa17.01■□□□□ 0.31
CKAP2-205ENST00000468284 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
CKAP2-205ENST00000468284 FOXK1P85037 733 aa16.99■□□□□ 0.31
CKAP2-205ENST00000468284 PLPP6Q8IY26 295 aa16.97■□□□□ 0.31
CKAP2-205ENST00000468284 LHX6Q9UPM6 363 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms