RNA–Protein interactions for RNA: ENST00000467728.5

NR1H3-217, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1H3, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-217ENST00000467728 FHOD3Q2V2M9 1422 aa17.33■□□□□ 0.37
NR1H3-217ENST00000467728 PTPN23Q9H3S7 1636 aa17.33■□□□□ 0.37
NR1H3-217ENST00000467728 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
NR1H3-217ENST00000467728 KIF7Q2M1P5 1343 aa17.33■□□□□ 0.36
NR1H3-217ENST00000467728 GSE1Q14687 1217 aa17.32■□□□□ 0.36
NR1H3-217ENST00000467728 FOXD1Q16676 465 aa17.32■□□□□ 0.36
NR1H3-217ENST00000467728 EXOC6Q8TAG9 804 aa17.32■□□□□ 0.36
NR1H3-217ENST00000467728 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
NR1H3-217ENST00000467728 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
NR1H3-217ENST00000467728 TCERG1O14776 1098 aaKnown RBP17.3■□□□□ 0.36
NR1H3-217ENST00000467728 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
NR1H3-217ENST00000467728 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
NR1H3-217ENST00000467728 POLA1P09884 1462 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-217ENST00000467728 RAD54L2Q9Y4B4 1467 aa17.28■□□□□ 0.36
NR1H3-217ENST00000467728 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
NR1H3-217ENST00000467728 FMN1Q68DA7 1419 aa17.28■□□□□ 0.36
NR1H3-217ENST00000467728 SLC4A3P48751 1232 aa17.27■□□□□ 0.36
NR1H3-217ENST00000467728 FRAT1Q92837 279 aaPredicted RBP17.27■□□□□ 0.36
NR1H3-217ENST00000467728 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
NR1H3-217ENST00000467728 NFKBIBQ15653 356 aa17.26■□□□□ 0.35
NR1H3-217ENST00000467728 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
NR1H3-217ENST00000467728 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
NR1H3-217ENST00000467728 RRP1P56182 461 aaKnown RBP17.23■□□□□ 0.35
NR1H3-217ENST00000467728 MPHOSPH9Q99550 1183 aa17.22■□□□□ 0.35
NR1H3-217ENST00000467728 FYCO1Q9BQS8 1478 aa17.21■□□□□ 0.35
NR1H3-217ENST00000467728 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.35
NR1H3-217ENST00000467728 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.34
NR1H3-217ENST00000467728 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
NR1H3-217ENST00000467728 DHX29Q7Z478 1369 aaKnown RBP17.19■□□□□ 0.34
NR1H3-217ENST00000467728 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
NR1H3-217ENST00000467728 MS4A1P11836 297 aa17.18■□□□□ 0.34
NR1H3-217ENST00000467728 SPATA31E1Q6ZUB1 1445 aa17.16■□□□□ 0.34
NR1H3-217ENST00000467728 RCAN3Q9UKA8 241 aa17.16■□□□□ 0.34
NR1H3-217ENST00000467728 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
NR1H3-217ENST00000467728 DDRGK1Q96HY6 314 aa17.15■□□□□ 0.34
NR1H3-217ENST00000467728 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
NR1H3-217ENST00000467728 DCAF11Q8TEB1 546 aa17.13■□□□□ 0.33
NR1H3-217ENST00000467728 PLIN1O60240 522 aa17.13■□□□□ 0.33
NR1H3-217ENST00000467728 KDM6BO15054 1643 aa17.11■□□□□ 0.33
NR1H3-217ENST00000467728 FRAT2O75474 233 aaPredicted RBP17.11■□□□□ 0.33
NR1H3-217ENST00000467728 RSPH6AQ9H0K4 717 aa17.11■□□□□ 0.33
NR1H3-217ENST00000467728 DAXXQ9UER7 740 aaPredicted RBP17.11■□□□□ 0.33
NR1H3-217ENST00000467728 TDRD9Q8NDG6 1382 aaKnown RBP17.1■□□□□ 0.33
NR1H3-217ENST00000467728 ZNF326Q5BKZ1 582 aaKnown RBP17.1■□□□□ 0.33
NR1H3-217ENST00000467728 TARBP1Q13395 1621 aaKnown RBP17.08■□□□□ 0.33
NR1H3-217ENST00000467728 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
NR1H3-217ENST00000467728 CDCA7LQ96GN5 454 aa17.07■□□□□ 0.32
NR1H3-217ENST00000467728 WDR62O43379 1518 aa17.06■□□□□ 0.32
NR1H3-217ENST00000467728 ABCA5Q8WWZ7 1642 aa17.06■□□□□ 0.32
NR1H3-217ENST00000467728 HECW1Q76N89 1606 aa17.05■□□□□ 0.32
NR1H3-217ENST00000467728 ANKRD30BQ9BXX2 1392 aa17.05■□□□□ 0.32
NR1H3-217ENST00000467728 PKNOX2Q96KN3 472 aa17.05■□□□□ 0.32
NR1H3-217ENST00000467728 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
NR1H3-217ENST00000467728 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
NR1H3-217ENST00000467728 RPRD2Q5VT52 1461 aaKnown RBP17.03■□□□□ 0.32
NR1H3-217ENST00000467728 TEX14Q8IWB6 1497 aa17.03■□□□□ 0.32
NR1H3-217ENST00000467728 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.32
NR1H3-217ENST00000467728 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.31
NR1H3-217ENST00000467728 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
NR1H3-217ENST00000467728 EFCAB5A4FU69 1503 aa17.01■□□□□ 0.31
NR1H3-217ENST00000467728 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
NR1H3-217ENST00000467728 USP47Q96K76 1375 aa17.01■□□□□ 0.31
NR1H3-217ENST00000467728 POLR1AO95602 1720 aaPredicted RBP17■□□□□ 0.31
NR1H3-217ENST00000467728 BCORL1Q5H9F3 1711 aa17■□□□□ 0.31
NR1H3-217ENST00000467728 C20orf194Q5TEA3 1177 aa16.98■□□□□ 0.31
NR1H3-217ENST00000467728 RRAGDQ9NQL2 400 aaPredicted RBP16.98■□□□□ 0.31
NR1H3-217ENST00000467728 MIA2Q96PC5 1412 aa16.97■□□□□ 0.31
NR1H3-217ENST00000467728 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
NR1H3-217ENST00000467728 LRRIQ1Q96JM4 1722 aa16.96■□□□□ 0.31
NR1H3-217ENST00000467728 GCC2Q8IWJ2 1684 aa16.96■□□□□ 0.31
NR1H3-217ENST00000467728 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.3
NR1H3-217ENST00000467728 MYBBP1AQ9BQG0 1328 aaKnown RBP16.96■□□□□ 0.3
NR1H3-217ENST00000467728 CUL7Q14999 1698 aa16.95■□□□□ 0.3
NR1H3-217ENST00000467728 C8orf34Q49A92 452 aa16.95■□□□□ 0.3
NR1H3-217ENST00000467728 POGKQ9P215 609 aa16.95■□□□□ 0.3
NR1H3-217ENST00000467728 BRD4O60885 1362 aaPredicted RBP16.94■□□□□ 0.3
NR1H3-217ENST00000467728 IFT140Q96RY7 1462 aa16.94■□□□□ 0.3
NR1H3-217ENST00000467728 KIF15Q9NS87 1388 aa16.93■□□□□ 0.3
NR1H3-217ENST00000467728 ARID3CA6NKF2 412 aa16.93■□□□□ 0.3
NR1H3-217ENST00000467728 FAM161AQ3B820 660 aa16.93■□□□□ 0.3
NR1H3-217ENST00000467728 UGGT2Q9NYU1 1516 aa16.93■□□□□ 0.3
NR1H3-217ENST00000467728 PDE3BQ13370 1112 aa16.92■□□□□ 0.3
NR1H3-217ENST00000467728 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
NR1H3-217ENST00000467728 RGS3P49796 1198 aa16.91■□□□□ 0.3
NR1H3-217ENST00000467728 VSIG10Q8N0Z9 540 aa16.91■□□□□ 0.3
NR1H3-217ENST00000467728 ARXQ96QS3 562 aa16.9■□□□□ 0.3
NR1H3-217ENST00000467728 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
NR1H3-217ENST00000467728 RALBP1Q15311 655 aa16.9■□□□□ 0.3
NR1H3-217ENST00000467728 GRIN2BQ13224 1484 aa16.9■□□□□ 0.3
NR1H3-217ENST00000467728 EHBP1L1Q8N3D4 1523 aa16.89■□□□□ 0.29
NR1H3-217ENST00000467728 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
NR1H3-217ENST00000467728 ZMYND15Q9H091 742 aa16.89■□□□□ 0.29
NR1H3-217ENST00000467728 PBRM1Q86U86 1689 aa16.89■□□□□ 0.29
NR1H3-217ENST00000467728 ARID4BQ4LE39 1312 aaPredicted RBP16.88■□□□□ 0.29
NR1H3-217ENST00000467728 ST20-MTHFSA0A0A6YYL1 179 aa16.87■□□□□ 0.29
NR1H3-217ENST00000467728 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
NR1H3-217ENST00000467728 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
NR1H3-217ENST00000467728 KTN1Q86UP2 1357 aaKnown RBP16.86■□□□□ 0.29
NR1H3-217ENST00000467728 GLIPR1L2Q4G1C9 344 aa16.86■□□□□ 0.29
NR1H3-217ENST00000467728 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms