RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MLECQ14165 292 aa18.17■□□□□ 0.5
BRAT1-203ENST00000467558 C14orf37Q86TY3 774 aa18.17■□□□□ 0.5
BRAT1-203ENST00000467558 POLA1P09884 1462 aaPredicted RBP18.17■□□□□ 0.5
BRAT1-203ENST00000467558 FGD6Q6ZV73 1430 aa18.17■□□□□ 0.5
BRAT1-203ENST00000467558 SENP3-EIF4A1A0A087X0R7 540 aa18.16■□□□□ 0.5
BRAT1-203ENST00000467558 ROCK2O75116 1388 aaKnown RBP18.16■□□□□ 0.5
BRAT1-203ENST00000467558 NUDCQ9Y266 331 aa18.16■□□□□ 0.5
BRAT1-203ENST00000467558 MYOM3Q5VTT5 1437 aa18.15■□□□□ 0.5
BRAT1-203ENST00000467558 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
BRAT1-203ENST00000467558 PHLDB1Q86UU1 1377 aa18.14■□□□□ 0.5
BRAT1-203ENST00000467558 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
BRAT1-203ENST00000467558 PEG3Q9GZU2 1588 aa18.13■□□□□ 0.49
BRAT1-203ENST00000467558 DNAJC5BQ9UF47 199 aa18.12■□□□□ 0.49
BRAT1-203ENST00000467558 OSCARQ8IYS5 282 aa18.11■□□□□ 0.49
BRAT1-203ENST00000467558 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
BRAT1-203ENST00000467558 IFT140Q96RY7 1462 aa18.1■□□□□ 0.49
BRAT1-203ENST00000467558 TNNT2P45379 298 aaPredicted RBP18.09■□□□□ 0.49
BRAT1-203ENST00000467558 MAPK8IP3Q9UPT6 1336 aa18.09■□□□□ 0.49
BRAT1-203ENST00000467558 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
BRAT1-203ENST00000467558 FYCO1Q9BQS8 1478 aa18.09■□□□□ 0.49
BRAT1-203ENST00000467558 NEUROD2Q15784 382 aa18.08■□□□□ 0.49
BRAT1-203ENST00000467558 SRPK2P78362 688 aaKnown RBP18.08■□□□□ 0.48
BRAT1-203ENST00000467558 EFCAB5A4FU69 1503 aa18.07■□□□□ 0.48
BRAT1-203ENST00000467558 KTN1Q86UP2 1357 aaKnown RBP18.07■□□□□ 0.48
BRAT1-203ENST00000467558 WASHC2CQ9Y4E1 1318 aa18.06■□□□□ 0.48
BRAT1-203ENST00000467558 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
BRAT1-203ENST00000467558 NCOA2Q15596 1464 aa18.05■□□□□ 0.48
BRAT1-203ENST00000467558 CCDC144AA2RUR9 1427 aa18.05■□□□□ 0.48
BRAT1-203ENST00000467558 ZBTB7CA1YPR0 619 aa18.05■□□□□ 0.48
BRAT1-203ENST00000467558 RALBP1Q15311 655 aa18.05■□□□□ 0.48
BRAT1-203ENST00000467558 HSP90AA1P07900 732 aaKnown RBP18.04■□□□□ 0.48
BRAT1-203ENST00000467558 PPP4R2Q9NY27 417 aa18.04■□□□□ 0.48
BRAT1-203ENST00000467558 ZNF644Q9H582 1327 aaPredicted RBP18.04■□□□□ 0.48
BRAT1-203ENST00000467558 SAFB2Q14151 953 aaKnown RBP eCLIP18.03■□□□□ 0.48
BRAT1-203ENST00000467558 MORC1Q86VD1 984 aa18.03■□□□□ 0.48
BRAT1-203ENST00000467558 RRBP1Q9P2E9 1410 aaKnown RBP18.02■□□□□ 0.48
BRAT1-203ENST00000467558 EIF3AQ14152 1382 aaKnown RBP18.02■□□□□ 0.48
BRAT1-203ENST00000467558 PLEKHG5O94827 1062 aa18.02■□□□□ 0.47
BRAT1-203ENST00000467558 STK26Q9P289 416 aa18.02■□□□□ 0.47
BRAT1-203ENST00000467558 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
BRAT1-203ENST00000467558 PNNQ9H307 717 aaKnown RBP18.01■□□□□ 0.47
BRAT1-203ENST00000467558 UACAQ9BZF9 1416 aa18.01■□□□□ 0.47
BRAT1-203ENST00000467558 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
BRAT1-203ENST00000467558 LAMC3Q9Y6N6 1575 aa18■□□□□ 0.47
BRAT1-203ENST00000467558 PRDM2Q13029 1718 aa17.97■□□□□ 0.47
BRAT1-203ENST00000467558 CYB5RLQ6IPT4 315 aa17.97■□□□□ 0.47
BRAT1-203ENST00000467558 FTSJ3Q8IY81 847 aaKnown RBP17.97■□□□□ 0.47
BRAT1-203ENST00000467558 KIF15Q9NS87 1388 aa17.96■□□□□ 0.47
BRAT1-203ENST00000467558 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
BRAT1-203ENST00000467558 ST20-MTHFSA0A0A6YYL1 179 aa17.95■□□□□ 0.46
BRAT1-203ENST00000467558 PRG4Q92954 1404 aaPredicted RBP17.94■□□□□ 0.46
BRAT1-203ENST00000467558 LAS1LQ9Y4W2 734 aaKnown RBP17.93■□□□□ 0.46
BRAT1-203ENST00000467558 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
BRAT1-203ENST00000467558 SNAPC4Q5SXM2 1469 aa17.92■□□□□ 0.46
BRAT1-203ENST00000467558 ANKRD50Q9ULJ7 1429 aa17.92■□□□□ 0.46
BRAT1-203ENST00000467558 NLRP13Q86W25 1043 aa17.92■□□□□ 0.46
BRAT1-203ENST00000467558 LMOD2Q6P5Q4 547 aa17.91■□□□□ 0.46
BRAT1-203ENST00000467558 MS4A1P11836 297 aa17.91■□□□□ 0.46
BRAT1-203ENST00000467558 FRAT1Q92837 279 aaPredicted RBP17.91■□□□□ 0.46
BRAT1-203ENST00000467558 HAP1P54257 671 aaPredicted RBP17.9■□□□□ 0.46
BRAT1-203ENST00000467558 TIAM1Q13009 1591 aa17.89■□□□□ 0.45
BRAT1-203ENST00000467558 MIA2Q96PC5 1412 aa17.89■□□□□ 0.45
BRAT1-203ENST00000467558 USP47Q96K76 1375 aa17.88■□□□□ 0.45
BRAT1-203ENST00000467558 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
BRAT1-203ENST00000467558 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
BRAT1-203ENST00000467558 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
BRAT1-203ENST00000467558 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
BRAT1-203ENST00000467558 TROQ12816 1431 aaPredicted RBP17.86■□□□□ 0.45
BRAT1-203ENST00000467558 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
BRAT1-203ENST00000467558 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
BRAT1-203ENST00000467558 ERICH6BQ5W0A0 696 aa17.85■□□□□ 0.45
BRAT1-203ENST00000467558 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
BRAT1-203ENST00000467558 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
BRAT1-203ENST00000467558 NUTM2DQ5VT03 806 aaPredicted RBP17.84■□□□□ 0.45
BRAT1-203ENST00000467558 DDRGK1Q96HY6 314 aa17.84■□□□□ 0.45
BRAT1-203ENST00000467558 PRKRIP1Q9H875 184 aaPredicted RBP17.83■□□□□ 0.45
BRAT1-203ENST00000467558 U2AF1L5P0DN76 240 aaPredicted RBP17.83■□□□□ 0.44
BRAT1-203ENST00000467558 U2AF1Q01081 240 aaKnown RBP eCLIP17.83■□□□□ 0.44
BRAT1-203ENST00000467558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.82■□□□□ 0.44
BRAT1-203ENST00000467558 A0A0G2JS52 829 aa17.82■□□□□ 0.44
BRAT1-203ENST00000467558 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
BRAT1-203ENST00000467558 HECW1Q76N89 1606 aa17.81■□□□□ 0.44
BRAT1-203ENST00000467558 SOX12O15370 315 aa17.81■□□□□ 0.44
BRAT1-203ENST00000467558 BECN1Q14457 450 aa17.8■□□□□ 0.44
BRAT1-203ENST00000467558 CUL7Q14999 1698 aa17.8■□□□□ 0.44
BRAT1-203ENST00000467558 PANK3Q9H999 370 aa17.8■□□□□ 0.44
BRAT1-203ENST00000467558 RCAN3Q9UKA8 241 aa17.8■□□□□ 0.44
BRAT1-203ENST00000467558 MYBBP1AQ9BQG0 1328 aaKnown RBP17.79■□□□□ 0.44
BRAT1-203ENST00000467558 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
BRAT1-203ENST00000467558 AFAP1Q8N556 730 aa17.79■□□□□ 0.44
BRAT1-203ENST00000467558 ARHGAP5Q13017 1502 aa17.79■□□□□ 0.44
BRAT1-203ENST00000467558 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
BRAT1-203ENST00000467558 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
BRAT1-203ENST00000467558 RGS3P49796 1198 aa17.77■□□□□ 0.44
BRAT1-203ENST00000467558 NBR1Q14596 966 aa17.77■□□□□ 0.44
BRAT1-203ENST00000467558 IQGAP2Q13576 1575 aa17.77■□□□□ 0.44
BRAT1-203ENST00000467558 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
BRAT1-203ENST00000467558 FAM69CQ0P6D2 419 aa17.76■□□□□ 0.43
BRAT1-203ENST00000467558 EPRSP07814 1512 aaKnown RBP17.76■□□□□ 0.43
BRAT1-203ENST00000467558 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms