RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
APP-214ENST00000466453 MAGI2Q86UL8 1455 aa14.3□□□□□ -0.12
APP-214ENST00000466453 PIP4K2BP78356 416 aa14.28□□□□□ -0.12
APP-214ENST00000466453 CAMSAP1Q5T5Y3 1602 aa14.24□□□□□ -0.13
APP-214ENST00000466453 TOM1O60784 492 aa14.24□□□□□ -0.13
APP-214ENST00000466453 C3P01024 1663 aa14.23□□□□□ -0.13
APP-214ENST00000466453 HECW1Q76N89 1606 aa14.23□□□□□ -0.13
APP-214ENST00000466453 CFAP74Q9C0B2 1584 aa14.22□□□□□ -0.13
APP-214ENST00000466453 ATP10BO94823 1461 aa14.22□□□□□ -0.13
APP-214ENST00000466453 C9orf84Q5VXU9 1444 aa14.21□□□□□ -0.13
APP-214ENST00000466453 TRAPPC8Q9Y2L5 1435 aa14.2□□□□□ -0.14
APP-214ENST00000466453 SETD1AO15047 1707 aaKnown RBP14.2□□□□□ -0.14
APP-214ENST00000466453 ATP10AO60312 1499 aa14.18□□□□□ -0.14
APP-214ENST00000466453 ALKQ9UM73 1620 aa14.17□□□□□ -0.14
APP-214ENST00000466453 GOLGA3Q08378 1498 aa14.17□□□□□ -0.14
APP-214ENST00000466453 NCKAP5LQ9HCH0 1330 aa14.15□□□□□ -0.14
APP-214ENST00000466453 POTEAQ6S8J7 498 aa14.15□□□□□ -0.14
APP-214ENST00000466453 PLA2R1Q13018 1463 aa14.14□□□□□ -0.15
APP-214ENST00000466453 ARID3CA6NKF2 412 aa14.14□□□□□ -0.15
APP-214ENST00000466453 CPS1P31327 1500 aa14.14□□□□□ -0.15
APP-214ENST00000466453 TCOF1Q13428 1488 aaKnown RBP14.13□□□□□ -0.15
APP-214ENST00000466453 PTPRKQ15262 1439 aa14.13□□□□□ -0.15
APP-214ENST00000466453 PKD2Q13563 968 aa14.12□□□□□ -0.15
APP-214ENST00000466453 ZNF142P52746 1687 aaPredicted RBP14.08□□□□□ -0.16
APP-214ENST00000466453 CTTNBP2Q8WZ74 1663 aa14.08□□□□□ -0.16
APP-214ENST00000466453 RAPGEF2Q9Y4G8 1499 aa14.08□□□□□ -0.16
APP-214ENST00000466453 PPP6R1Q9UPN7 881 aa14.08□□□□□ -0.16
APP-214ENST00000466453 UPF1Q92900 1129 aaKnown RBP eCLIP14.07□□□□□ -0.16
APP-214ENST00000466453 NPATQ14207 1427 aa14.07□□□□□ -0.16
APP-214ENST00000466453 SUPT6HQ7KZ85 1726 aaKnown RBP14.06□□□□□ -0.16
APP-214ENST00000466453 REREQ9P2R6 1566 aa14.05□□□□□ -0.16
APP-214ENST00000466453 SCAPERQ9BY12 1400 aa14.04□□□□□ -0.16
APP-214ENST00000466453 SHANK2Q9UPX8 1470 aa14.04□□□□□ -0.16
APP-214ENST00000466453 AGLP35573 1532 aa14.04□□□□□ -0.16
APP-214ENST00000466453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.02□□□□□ -0.16
APP-214ENST00000466453 CNTLNQ9NXG0 1405 aa14.02□□□□□ -0.16
APP-214ENST00000466453 MYO3AQ8NEV4 1616 aa14.01□□□□□ -0.17
APP-214ENST00000466453 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
APP-214ENST00000466453 CEP170BQ9Y4F5 1589 aaPredicted RBP14□□□□□ -0.17
APP-214ENST00000466453 MROH2AA6NES4 1674 aa13.99□□□□□ -0.17
APP-214ENST00000466453 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
APP-214ENST00000466453 DIP2CQ9Y2E4 1556 aa13.99□□□□□ -0.17
APP-214ENST00000466453 RAPGEF6Q8TEU7 1601 aa13.98□□□□□ -0.17
APP-214ENST00000466453 RNF17Q9BXT8 1623 aaKnown RBP13.97□□□□□ -0.17
APP-214ENST00000466453 KDM5CP41229 1560 aa13.96□□□□□ -0.17
APP-214ENST00000466453 FAM9AQ8IZU1 332 aaPredicted RBP13.96□□□□□ -0.17
APP-214ENST00000466453 VWDEQ8N2E2 1590 aa13.96□□□□□ -0.18
APP-214ENST00000466453 POLR1AO95602 1720 aaPredicted RBP13.95□□□□□ -0.18
APP-214ENST00000466453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
APP-214ENST00000466453 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
APP-214ENST00000466453 NEURL4Q96JN8 1562 aa13.95□□□□□ -0.18
APP-214ENST00000466453 NUP153P49790 1475 aaKnown RBP13.93□□□□□ -0.18
APP-214ENST00000466453 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
APP-214ENST00000466453 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
APP-214ENST00000466453 PLCH2O75038 1416 aa13.9□□□□□ -0.18
APP-214ENST00000466453 ZMYM3Q14202 1370 aa13.89□□□□□ -0.19
APP-214ENST00000466453 PLEKHD1A6NEE1 506 aa13.89□□□□□ -0.19
APP-214ENST00000466453 LRRC7Q96NW7 1537 aa13.88□□□□□ -0.19
APP-214ENST00000466453 SYNMO15061 1565 aa13.88□□□□□ -0.19
APP-214ENST00000466453 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
APP-214ENST00000466453 STRCP1A6NGW2 1772 aa13.85□□□□□ -0.19
APP-214ENST00000466453 A2ML1A8K2U0 1454 aa13.85□□□□□ -0.19
APP-214ENST00000466453 MLH3Q9UHC1 1453 aa13.85□□□□□ -0.19
APP-214ENST00000466453 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
APP-214ENST00000466453 MYO5CQ9NQX4 1742 aa13.82□□□□□ -0.2
APP-214ENST00000466453 AFAP1Q8N556 730 aa13.82□□□□□ -0.2
APP-214ENST00000466453 SAMD9Q5K651 1589 aa13.82□□□□□ -0.2
APP-214ENST00000466453 EFCAB2Q5VUJ9 269 aa13.81□□□□□ -0.2
APP-214ENST00000466453 CLTCQ00610 1675 aaKnown RBP13.81□□□□□ -0.2
APP-214ENST00000466453 TRIM52Q96A61 297 aa13.8□□□□□ -0.2
APP-214ENST00000466453 FAM135BQ49AJ0 1406 aa13.8□□□□□ -0.2
APP-214ENST00000466453 MYT1LQ9UL68 1186 aa13.79□□□□□ -0.2
APP-214ENST00000466453 MED14O60244 1454 aa13.78□□□□□ -0.2
APP-214ENST00000466453 CDK12Q9NYV4 1490 aaPredicted RBP13.77□□□□□ -0.21
APP-214ENST00000466453 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
APP-214ENST00000466453 SETBP1Q9Y6X0 1596 aa13.76□□□□□ -0.21
APP-214ENST00000466453 CDK13Q14004 1512 aaKnown RBP13.76□□□□□ -0.21
APP-214ENST00000466453 IFFO2Q5TF58 517 aa13.76□□□□□ -0.21
APP-214ENST00000466453 NPHP4O75161 1426 aaPredicted RBP13.75□□□□□ -0.21
APP-214ENST00000466453 KIDINS220Q9ULH0 1771 aa13.75□□□□□ -0.21
APP-214ENST00000466453 IQGAP1P46940 1657 aa13.75□□□□□ -0.21
APP-214ENST00000466453 EP400Q96L91 3159 aa13.74□□□□□ -0.21
APP-214ENST00000466453 XIRP1Q702N8 1843 aaKnown RBP13.74□□□□□ -0.21
APP-214ENST00000466453 ZNF772Q68DY9 489 aaPredicted RBP13.72□□□□□ -0.21
APP-214ENST00000466453 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
APP-214ENST00000466453 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
APP-214ENST00000466453 ROBO1Q9Y6N7 1651 aa13.71□□□□□ -0.21
APP-214ENST00000466453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.71□□□□□ -0.22
APP-214ENST00000466453 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
APP-214ENST00000466453 ABCC1P33527 1531 aa13.69□□□□□ -0.22
APP-214ENST00000466453 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
APP-214ENST00000466453 FOXD1Q16676 465 aa13.69□□□□□ -0.22
APP-214ENST00000466453 JCADQ9P266 1359 aa13.69□□□□□ -0.22
APP-214ENST00000466453 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
APP-214ENST00000466453 RXRBP28702 533 aa13.68□□□□□ -0.22
APP-214ENST00000466453 PRXQ9BXM0 1461 aa13.67□□□□□ -0.22
APP-214ENST00000466453 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
APP-214ENST00000466453 LRP6O75581 1613 aa13.67□□□□□ -0.22
APP-214ENST00000466453 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
APP-214ENST00000466453 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms