RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 PLB1Q6P1J6 1458 aa14.64□□□□□ -0.07
UFD1-206ENST00000466373 BCANQ96GW7 911 aa14.64□□□□□ -0.07
UFD1-206ENST00000466373 RAPGEF6Q8TEU7 1601 aa14.64□□□□□ -0.07
UFD1-206ENST00000466373 ABCC5O15440 1437 aa14.63□□□□□ -0.07
UFD1-206ENST00000466373 AKNAQ7Z591 1439 aa14.63□□□□□ -0.07
UFD1-206ENST00000466373 CFDP1Q9UEE9 299 aaPredicted RBP14.62□□□□□ -0.07
UFD1-206ENST00000466373 CCER2I3L3R5 266 aa14.62□□□□□ -0.07
UFD1-206ENST00000466373 SLC4A1APQ9BWU0 796 aaKnown RBP14.62□□□□□ -0.07
UFD1-206ENST00000466373 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
UFD1-206ENST00000466373 WASHC2AQ641Q2 1341 aa14.6□□□□□ -0.07
UFD1-206ENST00000466373 CEP170Q5SW79 1584 aa14.6□□□□□ -0.07
UFD1-206ENST00000466373 EIF4G2P78344 907 aaKnown RBP eCLIP14.59□□□□□ -0.07
UFD1-206ENST00000466373 FKBP8Q14318 412 aa14.59□□□□□ -0.07
UFD1-206ENST00000466373 MAGI1Q96QZ7 1491 aaPredicted RBP14.58□□□□□ -0.08
UFD1-206ENST00000466373 SYNJ2O15056 1496 aa14.58□□□□□ -0.08
UFD1-206ENST00000466373 DNMT1P26358 1616 aaKnown RBP14.57□□□□□ -0.08
UFD1-206ENST00000466373 TROQ12816 1431 aaPredicted RBP14.57□□□□□ -0.08
UFD1-206ENST00000466373 ROCK1Q13464 1354 aa14.57□□□□□ -0.08
UFD1-206ENST00000466373 NBPF8Q3BBV2 869 aa14.56□□□□□ -0.08
UFD1-206ENST00000466373 ANKRD30BQ9BXX2 1392 aa14.56□□□□□ -0.08
UFD1-206ENST00000466373 KIF14Q15058 1648 aa14.55□□□□□ -0.08
UFD1-206ENST00000466373 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
UFD1-206ENST00000466373 CAMSAP2Q08AD1 1489 aa14.54□□□□□ -0.08
UFD1-206ENST00000466373 CARMIL2Q6F5E8 1435 aa14.54□□□□□ -0.08
UFD1-206ENST00000466373 GPATCH8Q9UKJ3 1502 aaKnown RBP14.53□□□□□ -0.08
UFD1-206ENST00000466373 ZNF326Q5BKZ1 582 aaKnown RBP14.52□□□□□ -0.09
UFD1-206ENST00000466373 HNRNPUQ00839 825 aaKnown RBP eCLIP14.51□□□□□ -0.09
UFD1-206ENST00000466373 RPRD2Q5VT52 1461 aaKnown RBP14.51□□□□□ -0.09
UFD1-206ENST00000466373 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
UFD1-206ENST00000466373 NCOA1Q15788 1441 aa14.51□□□□□ -0.09
UFD1-206ENST00000466373 NUP160Q12769 1436 aa14.49□□□□□ -0.09
UFD1-206ENST00000466373 NEFLP07196 543 aa14.49□□□□□ -0.09
UFD1-206ENST00000466373 CNGB1Q14028 1251 aaPredicted RBP14.48□□□□□ -0.09
UFD1-206ENST00000466373 PKD2Q13563 968 aa14.48□□□□□ -0.09
UFD1-206ENST00000466373 CCDC184Q52MB2 194 aa14.48□□□□□ -0.09
UFD1-206ENST00000466373 TEX14Q8IWB6 1497 aa14.48□□□□□ -0.09
UFD1-206ENST00000466373 PZPP20742 1482 aa14.47□□□□□ -0.09
UFD1-206ENST00000466373 ITSN2Q9NZM3 1697 aa14.46□□□□□ -0.09
UFD1-206ENST00000466373 POLR3GLQ9BT43 218 aa14.46□□□□□ -0.09
UFD1-206ENST00000466373 CCDC7Q96M83 1385 aa14.46□□□□□ -0.1
UFD1-206ENST00000466373 TSHZ2Q9NRE2 1034 aa14.45□□□□□ -0.1
UFD1-206ENST00000466373 ANKRD30AQ9BXX3 1397 aa14.45□□□□□ -0.1
UFD1-206ENST00000466373 ATP10BO94823 1461 aa14.44□□□□□ -0.1
UFD1-206ENST00000466373 CNTLNQ9NXG0 1405 aa14.44□□□□□ -0.1
UFD1-206ENST00000466373 HNRNPMP52272 730 aaKnown RBP eCLIP14.44□□□□□ -0.1
UFD1-206ENST00000466373 ANKRD50Q9ULJ7 1429 aa14.43□□□□□ -0.1
UFD1-206ENST00000466373 KIF7Q2M1P5 1343 aa14.43□□□□□ -0.1
UFD1-206ENST00000466373 FAM9BQ8IZU0 186 aa14.43□□□□□ -0.1
UFD1-206ENST00000466373 PRKRIP1Q9H875 184 aaPredicted RBP14.42□□□□□ -0.1
UFD1-206ENST00000466373 ADCY10Q96PN6 1610 aa14.42□□□□□ -0.1
UFD1-206ENST00000466373 ADGBQ8N7X0 1667 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 NUP155O75694 1391 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 TSPY4P0CV99 314 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 TSPY10P0CW01 314 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
UFD1-206ENST00000466373 IRX6P78412 446 aaPredicted RBP14.41□□□□□ -0.1
UFD1-206ENST00000466373 CDC42BPAQ5VT25 1732 aa14.4□□□□□ -0.1
UFD1-206ENST00000466373 ABCA8O94911 1581 aa14.4□□□□□ -0.1
UFD1-206ENST00000466373 MRS2Q9HD23 443 aa14.4□□□□□ -0.1
UFD1-206ENST00000466373 ADGRL2O95490 1459 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 C9orf84Q5VXU9 1444 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 CROCC2H7BZ55 1655 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 PTPRGP23470 1445 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 SPATA31E1Q6ZUB1 1445 aa14.39□□□□□ -0.11
UFD1-206ENST00000466373 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
UFD1-206ENST00000466373 KDM2AQ9Y2K7 1162 aa14.38□□□□□ -0.11
UFD1-206ENST00000466373 USP47Q96K76 1375 aa14.36□□□□□ -0.11
UFD1-206ENST00000466373 KIF15Q9NS87 1388 aa14.35□□□□□ -0.11
UFD1-206ENST00000466373 MBD5Q9P267 1494 aa14.32□□□□□ -0.12
UFD1-206ENST00000466373 SENP3-EIF4A1A0A087X0R7 540 aa14.32□□□□□ -0.12
UFD1-206ENST00000466373 DCAF11Q8TEB1 546 aa14.31□□□□□ -0.12
UFD1-206ENST00000466373 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
UFD1-206ENST00000466373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.121e-6■■□□□ 11.7
UFD1-206ENST00000466373 SHANK2Q9UPX8 1470 aa14.3□□□□□ -0.12
UFD1-206ENST00000466373 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
UFD1-206ENST00000466373 RGL3Q3MIN7 710 aa14.28□□□□□ -0.12
UFD1-206ENST00000466373 CHD1O14646 1710 aa14.27□□□□□ -0.12
UFD1-206ENST00000466373 SAMD9LQ8IVG5 1584 aa14.27□□□□□ -0.13
UFD1-206ENST00000466373 ST20-MTHFSA0A0A6YYL1 179 aa14.27□□□□□ -0.13
UFD1-206ENST00000466373 CDC42BPBQ9Y5S2 1711 aa14.27□□□□□ -0.13
UFD1-206ENST00000466373 POLR1AO95602 1720 aaPredicted RBP14.26□□□□□ -0.13
UFD1-206ENST00000466373 CCDC141Q6ZP82 1450 aa14.26□□□□□ -0.13
UFD1-206ENST00000466373 DHX29Q7Z478 1369 aaKnown RBP14.25□□□□□ -0.13
UFD1-206ENST00000466373 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
UFD1-206ENST00000466373 KDM5CP41229 1560 aa14.24□□□□□ -0.13
UFD1-206ENST00000466373 ARHGAP5Q13017 1502 aa14.24□□□□□ -0.13
UFD1-206ENST00000466373 SYCP2Q9BX26 1530 aa14.24□□□□□ -0.13
UFD1-206ENST00000466373 ARHGEF5Q12774 1597 aa14.23□□□□□ -0.13
UFD1-206ENST00000466373 ZBED9Q6R2W3 1325 aa14.23□□□□□ -0.13
UFD1-206ENST00000466373 TTC37Q6PGP7 1564 aa14.23□□□□□ -0.13
UFD1-206ENST00000466373 PREX2Q70Z35 1606 aa14.22□□□□□ -0.13
UFD1-206ENST00000466373 RALGAPBQ86X10 1494 aa14.22□□□□□ -0.13
UFD1-206ENST00000466373 FAM135AQ9P2D6 1515 aa14.22□□□□□ -0.13
UFD1-206ENST00000466373 UHRF1BP1Q6BDS2 1440 aa14.22□□□□□ -0.13
UFD1-206ENST00000466373 RBM19Q9Y4C8 960 aaKnown RBP14.21□□□□□ -0.13
UFD1-206ENST00000466373 ROCK2O75116 1388 aaKnown RBP14.21□□□□□ -0.14
UFD1-206ENST00000466373 KDM5DQ9BY66 1539 aa14.21□□□□□ -0.14
UFD1-206ENST00000466373 RSPH4AQ5TD94 716 aa14.2□□□□□ -0.14
UFD1-206ENST00000466373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.2□□□□□ -0.14
UFD1-206ENST00000466373 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms