RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 CLEC11AQ9Y240 323 aa12.42□□□□□ -0.42
VPS8-218ENST00000465818 STK25O00506 426 aa12.41□□□□□ -0.42
VPS8-218ENST00000465818 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
VPS8-218ENST00000465818 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
VPS8-218ENST00000465818 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
VPS8-218ENST00000465818 VGFO15240 615 aaPredicted RBP12.39□□□□□ -0.43
VPS8-218ENST00000465818 NUP160Q12769 1436 aa12.38□□□□□ -0.43
VPS8-218ENST00000465818 CHMP7Q8WUX9 453 aaPredicted RBP12.38□□□□□ -0.43
VPS8-218ENST00000465818 IQGAP2Q13576 1575 aa12.38□□□□□ -0.43
VPS8-218ENST00000465818 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
VPS8-218ENST00000465818 SGIP1Q9BQI5 828 aa12.37□□□□□ -0.43
VPS8-218ENST00000465818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
VPS8-218ENST00000465818 NBR1Q14596 966 aa12.36□□□□□ -0.43
VPS8-218ENST00000465818 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
VPS8-218ENST00000465818 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
VPS8-218ENST00000465818 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
VPS8-218ENST00000465818 PYGBP11216 843 aa12.33□□□□□ -0.44
VPS8-218ENST00000465818 SHROOM2Q13796 1616 aa12.33□□□□□ -0.44
VPS8-218ENST00000465818 KIAA0586Q9BVV6 1533 aa12.32□□□□□ -0.44
VPS8-218ENST00000465818 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
VPS8-218ENST00000465818 UBTFP17480 764 aaKnown RBP12.3□□□□□ -0.44
VPS8-218ENST00000465818 STK24Q9Y6E0 443 aa12.3□□□□□ -0.44
VPS8-218ENST00000465818 TNIKQ9UKE5 1360 aa12.3□□□□□ -0.44
VPS8-218ENST00000465818 UGGT2Q9NYU1 1516 aa12.28□□□□□ -0.44
VPS8-218ENST00000465818 SAMD9Q5K651 1589 aa12.28□□□□□ -0.44
VPS8-218ENST00000465818 PITPNM1O00562 1244 aa12.28□□□□□ -0.44
VPS8-218ENST00000465818 CEP162Q5TB80 1403 aa12.27□□□□□ -0.45
VPS8-218ENST00000465818 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.45
VPS8-218ENST00000465818 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
VPS8-218ENST00000465818 ERCC6L2Q5T890 1561 aa12.23□□□□□ -0.45
VPS8-218ENST00000465818 DISP1Q96F81 1524 aa12.22□□□□□ -0.45
VPS8-218ENST00000465818 ARHGAP35Q9NRY4 1499 aa12.22□□□□□ -0.45
VPS8-218ENST00000465818 CLIP1P30622 1438 aa12.22□□□□□ -0.45
VPS8-218ENST00000465818 RANGAP1P46060 587 aaPredicted RBP12.2□□□□□ -0.46
VPS8-218ENST00000465818 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
VPS8-218ENST00000465818 ARAP1Q96P48 1450 aa12.19□□□□□ -0.46
VPS8-218ENST00000465818 PRG4Q92954 1404 aaPredicted RBP12.19□□□□□ -0.46
VPS8-218ENST00000465818 FHOD3Q2V2M9 1422 aa12.18□□□□□ -0.46
VPS8-218ENST00000465818 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
VPS8-218ENST00000465818 RIMBP3CA6NJZ7 1639 aa12.17□□□□□ -0.46
VPS8-218ENST00000465818 RIMBP3BA6NNM3 1639 aa12.17□□□□□ -0.46
VPS8-218ENST00000465818 RIMBP3Q9UFD9 1639 aa12.17□□□□□ -0.46
VPS8-218ENST00000465818 ARHGEF11O15085 1522 aa12.16□□□□□ -0.46
VPS8-218ENST00000465818 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
VPS8-218ENST00000465818 CARMIL2Q6F5E8 1435 aa12.16□□□□□ -0.46
VPS8-218ENST00000465818 PCF11O94913 1555 aaKnown RBP12.15□□□□□ -0.46
VPS8-218ENST00000465818 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
VPS8-218ENST00000465818 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
VPS8-218ENST00000465818 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
VPS8-218ENST00000465818 P3H3Q8IVL6 736 aa12.1□□□□□ -0.47
VPS8-218ENST00000465818 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
VPS8-218ENST00000465818 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
VPS8-218ENST00000465818 LRRIQ1Q96JM4 1722 aa12.1□□□□□ -0.47
VPS8-218ENST00000465818 KCNV2Q8TDN2 545 aa12.09□□□□□ -0.47
VPS8-218ENST00000465818 ABCA8O94911 1581 aa12.09□□□□□ -0.47
VPS8-218ENST00000465818 HECW1Q76N89 1606 aa12.08□□□□□ -0.48
VPS8-218ENST00000465818 FMN1Q68DA7 1419 aa12.08□□□□□ -0.48
VPS8-218ENST00000465818 VPS8Q8N3P4 1428 aa12.08□□□□□ -0.48
VPS8-218ENST00000465818 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
VPS8-218ENST00000465818 ADCY10Q96PN6 1610 aa12.07□□□□□ -0.48
VPS8-218ENST00000465818 FYCO1Q9BQS8 1478 aa12.07□□□□□ -0.48
VPS8-218ENST00000465818 CFAP43Q8NDM7 1665 aa12.06□□□□□ -0.48
VPS8-218ENST00000465818 ZNF467Q7Z7K2 595 aaPredicted RBP12.06□□□□□ -0.48
VPS8-218ENST00000465818 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
VPS8-218ENST00000465818 CCDC61Q9Y6R9 512 aa12.06□□□□□ -0.48
VPS8-218ENST00000465818 PLB1Q6P1J6 1458 aa12.06□□□□□ -0.48
VPS8-218ENST00000465818 TTBK1Q5TCY1 1321 aaPredicted RBP12.06□□□□□ -0.48
VPS8-218ENST00000465818 PTPRGP23470 1445 aa12.05□□□□□ -0.48
VPS8-218ENST00000465818 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
VPS8-218ENST00000465818 ABCC2Q92887 1545 aa12.04□□□□□ -0.48
VPS8-218ENST00000465818 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
VPS8-218ENST00000465818 NUP153P49790 1475 aaKnown RBP12.02□□□□□ -0.49
VPS8-218ENST00000465818 ZCCHC11Q5TAX3 1644 aaKnown RBP12.01□□□□□ -0.49
VPS8-218ENST00000465818 UACAQ9BZF9 1416 aa12.01□□□□□ -0.49
VPS8-218ENST00000465818 PPP1R37O75864 691 aa12□□□□□ -0.49
VPS8-218ENST00000465818 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
VPS8-218ENST00000465818 CDK13Q14004 1512 aaKnown RBP12□□□□□ -0.49
VPS8-218ENST00000465818 PSEN1P49768 467 aa11.99□□□□□ -0.49
VPS8-218ENST00000465818 UHRF1BP1LA0JNW5 1464 aa11.99□□□□□ -0.49
VPS8-218ENST00000465818 TIAM1Q13009 1591 aa11.99□□□□□ -0.49
VPS8-218ENST00000465818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.98□□□□□ -0.49
VPS8-218ENST00000465818 EPRSP07814 1512 aaKnown RBP11.97□□□□□ -0.49
VPS8-218ENST00000465818 CCDC18Q5T9S5 1454 aa11.97□□□□□ -0.49
VPS8-218ENST00000465818 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
VPS8-218ENST00000465818 FBXO22Q8NEZ5 403 aa11.95□□□□□ -0.5
VPS8-218ENST00000465818 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
VPS8-218ENST00000465818 LMOD2Q6P5Q4 547 aa11.94□□□□□ -0.5
VPS8-218ENST00000465818 IFNL1Q8IU54 200 aa11.94□□□□□ -0.5
VPS8-218ENST00000465818 TULP1O00294 542 aaPredicted RBP11.93□□□□□ -0.5
VPS8-218ENST00000465818 ATP1B4Q9UN42 357 aaPredicted RBP11.93□□□□□ -0.5
VPS8-218ENST00000465818 MAP3K1Q13233 1512 aa11.92□□□□□ -0.5
VPS8-218ENST00000465818 MAGI3Q5TCQ9 1506 aa11.92□□□□□ -0.5
VPS8-218ENST00000465818 ATP10BO94823 1461 aa11.92□□□□□ -0.5
VPS8-218ENST00000465818 ARID3CA6NKF2 412 aa11.92□□□□□ -0.5
VPS8-218ENST00000465818 PRKAR2AP13861 404 aaKnown RBP11.92□□□□□ -0.5
VPS8-218ENST00000465818 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
VPS8-218ENST00000465818 WDR70Q9NW82 654 aa11.92□□□□□ -0.5
VPS8-218ENST00000465818 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
VPS8-218ENST00000465818 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
VPS8-218ENST00000465818 EFCAB3Q8N7B9 438 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms