RNA–Protein interactions for RNA: ENST00000465656.1

ZNF490-204, Transcript of zinc finger protein 490, humanhuman

TSL 4

Gene ZNF490, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-204ENST00000465656 MAGI2Q86UL8 1455 aa22.08■■□□□ 1.12
ZNF490-204ENST00000465656 CFAP74Q9C0B2 1584 aa22.07■■□□□ 1.12
ZNF490-204ENST00000465656 ARHGEF12Q9NZN5 1544 aa22.06■■□□□ 1.12
ZNF490-204ENST00000465656 SETD1BQ9UPS6 1966 aaKnown RBP22.05■■□□□ 1.12
ZNF490-204ENST00000465656 UBAP1LF5GYI3 381 aa22.05■■□□□ 1.12
ZNF490-204ENST00000465656 HECW1Q76N89 1606 aa22.01■■□□□ 1.11
ZNF490-204ENST00000465656 RAPGEF6Q8TEU7 1601 aa21.98■■□□□ 1.11
ZNF490-204ENST00000465656 ATP10AO60312 1499 aa21.98■■□□□ 1.11
ZNF490-204ENST00000465656 PLEKHD1A6NEE1 506 aa21.98■■□□□ 1.11
ZNF490-204ENST00000465656 C9orf84Q5VXU9 1444 aa21.95■■□□□ 1.1
ZNF490-204ENST00000465656 SCAPERQ9BY12 1400 aa21.92■■□□□ 1.1
ZNF490-204ENST00000465656 MED1Q15648 1581 aaPredicted RBP21.91■■□□□ 1.1
ZNF490-204ENST00000465656 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.9■■□□□ 1.1
ZNF490-204ENST00000465656 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
ZNF490-204ENST00000465656 NCOA1Q15788 1441 aa21.89■■□□□ 1.09
ZNF490-204ENST00000465656 PHF23Q9BUL5 403 aaPredicted RBP21.87■■□□□ 1.09
ZNF490-204ENST00000465656 ZNF335Q9H4Z2 1342 aaPredicted RBP21.86■■□□□ 1.09
ZNF490-204ENST00000465656 ESF1Q9H501 851 aaKnown RBP21.86■■□□□ 1.09
ZNF490-204ENST00000465656 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
ZNF490-204ENST00000465656 HSPA1LP34931 641 aa21.85■■□□□ 1.09
ZNF490-204ENST00000465656 C3P01024 1663 aa21.85■■□□□ 1.09
ZNF490-204ENST00000465656 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
ZNF490-204ENST00000465656 MYT1LQ9UL68 1186 aa21.81■■□□□ 1.08
ZNF490-204ENST00000465656 PRXQ9BXM0 1461 aa21.81■■□□□ 1.08
ZNF490-204ENST00000465656 SAMD9Q5K651 1589 aa21.81■■□□□ 1.08
ZNF490-204ENST00000465656 PIP4K2BP78356 416 aa21.79■■□□□ 1.08
ZNF490-204ENST00000465656 CAMSAP1Q5T5Y3 1602 aa21.79■■□□□ 1.08
ZNF490-204ENST00000465656 NCKAP5LQ9HCH0 1330 aa21.79■■□□□ 1.08
ZNF490-204ENST00000465656 PLCH2O75038 1416 aa21.77■■□□□ 1.08
ZNF490-204ENST00000465656 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
ZNF490-204ENST00000465656 TOM1O60784 492 aa21.72■■□□□ 1.07
ZNF490-204ENST00000465656 ZNF518AQ6AHZ1 1483 aa21.71■■□□□ 1.07
ZNF490-204ENST00000465656 RANGAP1P46060 587 aaPredicted RBP21.71■■□□□ 1.07
ZNF490-204ENST00000465656 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
ZNF490-204ENST00000465656 PKD2Q13563 968 aa21.69■■□□□ 1.06
ZNF490-204ENST00000465656 REREQ9P2R6 1566 aa21.66■■□□□ 1.06
ZNF490-204ENST00000465656 DIP2CQ9Y2E4 1556 aa21.66■■□□□ 1.06
ZNF490-204ENST00000465656 CNTLNQ9NXG0 1405 aa21.66■■□□□ 1.06
ZNF490-204ENST00000465656 AGLP35573 1532 aa21.65■■□□□ 1.06
ZNF490-204ENST00000465656 MYO5CQ9NQX4 1742 aa21.64■■□□□ 1.06
ZNF490-204ENST00000465656 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
ZNF490-204ENST00000465656 KDM5CP41229 1560 aa21.64■■□□□ 1.05
ZNF490-204ENST00000465656 NPATQ14207 1427 aa21.63■■□□□ 1.05
ZNF490-204ENST00000465656 SUPT6HQ7KZ85 1726 aaKnown RBP21.6■■□□□ 1.05
ZNF490-204ENST00000465656 PLA2R1Q13018 1463 aa21.6■■□□□ 1.05
ZNF490-204ENST00000465656 ABCA6Q8N139 1617 aa21.59■■□□□ 1.05
ZNF490-204ENST00000465656 CDK13Q14004 1512 aaKnown RBP21.59■■□□□ 1.05
ZNF490-204ENST00000465656 ZMYM3Q14202 1370 aa21.57■■□□□ 1.04
ZNF490-204ENST00000465656 TCOF1Q13428 1488 aaKnown RBP21.57■■□□□ 1.04
ZNF490-204ENST00000465656 MLH3Q9UHC1 1453 aa21.56■■□□□ 1.04
ZNF490-204ENST00000465656 ARHGAP5Q13017 1502 aa21.55■■□□□ 1.04
ZNF490-204ENST00000465656 MROH2AA6NES4 1674 aa21.54■■□□□ 1.04
ZNF490-204ENST00000465656 SENP3Q9H4L4 574 aaPredicted RBP21.54■■□□□ 1.04
ZNF490-204ENST00000465656 CPS1P31327 1500 aa21.53■■□□□ 1.04
ZNF490-204ENST00000465656 ZNF142P52746 1687 aaPredicted RBP21.52■■□□□ 1.04
ZNF490-204ENST00000465656 PTPRKQ15262 1439 aa21.51■■□□□ 1.03
ZNF490-204ENST00000465656 MYO3AQ8NEV4 1616 aa21.51■■□□□ 1.03
ZNF490-204ENST00000465656 CEP170BQ9Y4F5 1589 aaPredicted RBP21.5■■□□□ 1.03
ZNF490-204ENST00000465656 ATP1B4Q9UN42 357 aaPredicted RBP21.5■■□□□ 1.03
ZNF490-204ENST00000465656 CDK11AQ9UQ88 783 aaPredicted RBP21.49■■□□□ 1.03
ZNF490-204ENST00000465656 RGS17Q9UGC6 210 aaPredicted RBP21.48■■□□□ 1.03
ZNF490-204ENST00000465656 SHANK2Q9UPX8 1470 aa21.47■■□□□ 1.03
ZNF490-204ENST00000465656 KIF14Q15058 1648 aa21.45■■□□□ 1.02
ZNF490-204ENST00000465656 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
ZNF490-204ENST00000465656 KIDINS220Q9ULH0 1771 aa21.41■■□□□ 1.02
ZNF490-204ENST00000465656 CLTCQ00610 1675 aaKnown RBP21.41■■□□□ 1.02
ZNF490-204ENST00000465656 ALKQ9UM73 1620 aa21.39■■□□□ 1.01
ZNF490-204ENST00000465656 CDC42BPBQ9Y5S2 1711 aa21.38■■□□□ 1.01
ZNF490-204ENST00000465656 POLR1AO95602 1720 aaPredicted RBP21.37■■□□□ 1.01
ZNF490-204ENST00000465656 CLIP1P30622 1438 aa21.37■■□□□ 1.01
ZNF490-204ENST00000465656 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
ZNF490-204ENST00000465656 ABCC1P33527 1531 aa21.35■■□□□ 1.01
ZNF490-204ENST00000465656 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
ZNF490-204ENST00000465656 A2ML1A8K2U0 1454 aa21.35■■□□□ 1.01
ZNF490-204ENST00000465656 DNMT1P26358 1616 aaKnown RBP21.35■■□□□ 1.01
ZNF490-204ENST00000465656 POTEAQ6S8J7 498 aa21.34■■□□□ 1.01
ZNF490-204ENST00000465656 NEURL4Q96JN8 1562 aa21.32■■□□□ 1
ZNF490-204ENST00000465656 GGT6Q6P531 493 aa21.32■■□□□ 1
ZNF490-204ENST00000465656 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
ZNF490-204ENST00000465656 ANKLE2Q86XL3 938 aa21.3■■□□□ 1
ZNF490-204ENST00000465656 PREX2Q70Z35 1606 aa21.28■■□□□ 1
ZNF490-204ENST00000465656 SPAG9O60271 1321 aaKnown RBP21.28■■□□□ 1
ZNF490-204ENST00000465656 SAMD9LQ8IVG5 1584 aa21.27■□□□□ 0.99
ZNF490-204ENST00000465656 FMN1Q68DA7 1419 aa21.26■□□□□ 0.99
ZNF490-204ENST00000465656 ZNF777Q9ULD5 760 aaPredicted RBP21.23■□□□□ 0.99
ZNF490-204ENST00000465656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
ZNF490-204ENST00000465656 RNF17Q9BXT8 1623 aaKnown RBP21.22■□□□□ 0.99
ZNF490-204ENST00000465656 LRRC7Q96NW7 1537 aa21.22■□□□□ 0.99
ZNF490-204ENST00000465656 NPHP4O75161 1426 aaPredicted RBP21.21■□□□□ 0.99
ZNF490-204ENST00000465656 A2MP01023 1474 aa21.21■□□□□ 0.99
ZNF490-204ENST00000465656 THEMISQ8N1K5 641 aaPredicted RBP21.21■□□□□ 0.99
ZNF490-204ENST00000465656 SETD1AO15047 1707 aaKnown RBP21.21■□□□□ 0.99
ZNF490-204ENST00000465656 TNRQ92752 1358 aa21.2■□□□□ 0.98
ZNF490-204ENST00000465656 PLXNC1O60486 1568 aa21.19■□□□□ 0.98
ZNF490-204ENST00000465656 HNRNPMP52272 730 aaKnown RBP eCLIP21.18■□□□□ 0.98
ZNF490-204ENST00000465656 FBXO31Q5XUX0 539 aaPredicted RBP21.17■□□□□ 0.98
ZNF490-204ENST00000465656 MED14O60244 1454 aa21.17■□□□□ 0.98
ZNF490-204ENST00000465656 ATP7AQ04656 1500 aa21.17■□□□□ 0.98
ZNF490-204ENST00000465656 STRCP1A6NGW2 1772 aa21.16■□□□□ 0.98
ZNF490-204ENST00000465656 CDC42BPAQ5VT25 1732 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms