RNA–Protein interactions for RNA: ENST00000464852.1

TNRC18-209, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 418 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-209ENST00000464852 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
TNRC18-209ENST00000464852 PPARGC1BQ86YN6 1023 aaKnown RBP16.73■□□□□ 0.27
TNRC18-209ENST00000464852 CDK11AQ9UQ88 783 aaPredicted RBP16.73■□□□□ 0.27
TNRC18-209ENST00000464852 TIAM1Q13009 1591 aa16.72■□□□□ 0.27
TNRC18-209ENST00000464852 LTBP4Q8N2S1 1624 aa16.72■□□□□ 0.27
TNRC18-209ENST00000464852 PHLDB1Q86UU1 1377 aa16.72■□□□□ 0.27
TNRC18-209ENST00000464852 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
TNRC18-209ENST00000464852 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
TNRC18-209ENST00000464852 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
TNRC18-209ENST00000464852 PREX1Q8TCU6 1659 aa16.71■□□□□ 0.27
TNRC18-209ENST00000464852 ARID3CA6NKF2 412 aa16.69■□□□□ 0.26
TNRC18-209ENST00000464852 LRRIQ1Q96JM4 1722 aa16.69■□□□□ 0.26
TNRC18-209ENST00000464852 LRRC9Q6ZRR7 1453 aa16.68■□□□□ 0.26
TNRC18-209ENST00000464852 FER1L4A9Z1Z3 1794 aa16.68■□□□□ 0.26
TNRC18-209ENST00000464852 ATP10BO94823 1461 aa16.67■□□□□ 0.26
TNRC18-209ENST00000464852 FOXD1Q16676 465 aa16.67■□□□□ 0.26
TNRC18-209ENST00000464852 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
TNRC18-209ENST00000464852 ARHGEF40Q8TER5 1519 aa16.66■□□□□ 0.26
TNRC18-209ENST00000464852 PLEKHD1A6NEE1 506 aa16.66■□□□□ 0.26
TNRC18-209ENST00000464852 IQSEC2Q5JU85 1478 aa16.66■□□□□ 0.26
TNRC18-209ENST00000464852 TTC37Q6PGP7 1564 aa16.65■□□□□ 0.26
TNRC18-209ENST00000464852 ABCA9Q8IUA7 1624 aa16.65■□□□□ 0.26
TNRC18-209ENST00000464852 SETD1BQ9UPS6 1966 aaKnown RBP16.65■□□□□ 0.26
TNRC18-209ENST00000464852 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
TNRC18-209ENST00000464852 PTPRTO14522 1441 aa16.63■□□□□ 0.25
TNRC18-209ENST00000464852 NEO1Q92859 1461 aa16.63■□□□□ 0.25
TNRC18-209ENST00000464852 MLECQ14165 292 aa16.63■□□□□ 0.25
TNRC18-209ENST00000464852 RICTORQ6R327 1708 aa16.62■□□□□ 0.25
TNRC18-209ENST00000464852 CEBPAP49715 358 aaPredicted RBP16.62■□□□□ 0.25
TNRC18-209ENST00000464852 MED1Q15648 1581 aaPredicted RBP16.62■□□□□ 0.25
TNRC18-209ENST00000464852 POGZQ7Z3K3 1410 aa16.61■□□□□ 0.25
TNRC18-209ENST00000464852 TRIM26Q12899 539 aaPredicted RBP16.59■□□□□ 0.25
TNRC18-209ENST00000464852 FANCAO15360 1455 aa16.59■□□□□ 0.25
TNRC18-209ENST00000464852 TROQ12816 1431 aaPredicted RBP16.58■□□□□ 0.24
TNRC18-209ENST00000464852 EHBP1L1Q8N3D4 1523 aa16.58■□□□□ 0.24
TNRC18-209ENST00000464852 UBAP1LF5GYI3 381 aa16.57■□□□□ 0.24
TNRC18-209ENST00000464852 SUPT6HQ7KZ85 1726 aaKnown RBP16.54■□□□□ 0.24
TNRC18-209ENST00000464852 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
TNRC18-209ENST00000464852 DENND4BO75064 1496 aaPredicted RBP16.52■□□□□ 0.23
TNRC18-209ENST00000464852 NCOA2Q15596 1464 aa16.52■□□□□ 0.23
TNRC18-209ENST00000464852 ARHGEF12Q9NZN5 1544 aa16.51■□□□□ 0.23
TNRC18-209ENST00000464852 UHRF1BP1Q6BDS2 1440 aa16.51■□□□□ 0.23
TNRC18-209ENST00000464852 HSPA1LP34931 641 aa16.5■□□□□ 0.23
TNRC18-209ENST00000464852 ZFYVE16Q7Z3T8 1539 aa16.48■□□□□ 0.23
TNRC18-209ENST00000464852 ZMYM4Q5VZL5 1548 aa16.47■□□□□ 0.23
TNRC18-209ENST00000464852 CCNB3Q8WWL7 1395 aa16.47■□□□□ 0.23
TNRC18-209ENST00000464852 KIF14Q15058 1648 aa16.45■□□□□ 0.22
TNRC18-209ENST00000464852 MYOM3Q5VTT5 1437 aa16.45■□□□□ 0.22
TNRC18-209ENST00000464852 ZNF335Q9H4Z2 1342 aaPredicted RBP16.45■□□□□ 0.22
TNRC18-209ENST00000464852 PCGF6Q9BYE7 350 aa16.44■□□□□ 0.22
TNRC18-209ENST00000464852 RRBP1Q9P2E9 1410 aaKnown RBP16.44■□□□□ 0.22
TNRC18-209ENST00000464852 NCOA1Q15788 1441 aa16.42■□□□□ 0.22
TNRC18-209ENST00000464852 MIA2Q96PC5 1412 aa16.42■□□□□ 0.22
TNRC18-209ENST00000464852 CFDP1Q9UEE9 299 aaPredicted RBP16.41■□□□□ 0.22
TNRC18-209ENST00000464852 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
TNRC18-209ENST00000464852 MAGI2Q86UL8 1455 aa16.41■□□□□ 0.22
TNRC18-209ENST00000464852 GPATCH8Q9UKJ3 1502 aaKnown RBP16.4■□□□□ 0.22
TNRC18-209ENST00000464852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.4■□□□□ 0.22
TNRC18-209ENST00000464852 C3P01024 1663 aa16.4■□□□□ 0.22
TNRC18-209ENST00000464852 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.39■□□□□ 0.21
TNRC18-209ENST00000464852 FAM50AQ14320 339 aaKnown RBP16.38■□□□□ 0.21
TNRC18-209ENST00000464852 PIP4K2BP78356 416 aa16.37■□□□□ 0.21
TNRC18-209ENST00000464852 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
TNRC18-209ENST00000464852 ATP10AO60312 1499 aa16.36■□□□□ 0.21
TNRC18-209ENST00000464852 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
TNRC18-209ENST00000464852 CDC42BPAQ5VT25 1732 aa16.35■□□□□ 0.21
TNRC18-209ENST00000464852 PLCH2O75038 1416 aa16.35■□□□□ 0.21
TNRC18-209ENST00000464852 EFCAB2Q5VUJ9 269 aa16.34■□□□□ 0.21
TNRC18-209ENST00000464852 RGS17Q9UGC6 210 aaPredicted RBP16.34■□□□□ 0.21
TNRC18-209ENST00000464852 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
TNRC18-209ENST00000464852 PTPN23Q9H3S7 1636 aa16.34■□□□□ 0.21
TNRC18-209ENST00000464852 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.2
TNRC18-209ENST00000464852 TCOF1Q13428 1488 aaKnown RBP16.33■□□□□ 0.2
TNRC18-209ENST00000464852 CFAP74Q9C0B2 1584 aa16.33■□□□□ 0.2
TNRC18-209ENST00000464852 CAMSAP1Q5T5Y3 1602 aa16.33■□□□□ 0.2
TNRC18-209ENST00000464852 MYO5CQ9NQX4 1742 aa16.32■□□□□ 0.2
TNRC18-209ENST00000464852 C9orf84Q5VXU9 1444 aa16.31■□□□□ 0.2
TNRC18-209ENST00000464852 CDC42BPBQ9Y5S2 1711 aa16.31■□□□□ 0.2
TNRC18-209ENST00000464852 PREX2Q70Z35 1606 aa16.3■□□□□ 0.2
TNRC18-209ENST00000464852 TRAPPC8Q9Y2L5 1435 aa16.3■□□□□ 0.2
TNRC18-209ENST00000464852 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
TNRC18-209ENST00000464852 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
TNRC18-209ENST00000464852 ARHGAP5Q13017 1502 aa16.29■□□□□ 0.2
TNRC18-209ENST00000464852 ITGAEP38570 1179 aa16.28■□□□□ 0.2
TNRC18-209ENST00000464852 SCAPERQ9BY12 1400 aa16.27■□□□□ 0.19
TNRC18-209ENST00000464852 TOM1O60784 492 aa16.26■□□□□ 0.19
TNRC18-209ENST00000464852 CAMSAP2Q08AD1 1489 aa16.26■□□□□ 0.19
TNRC18-209ENST00000464852 PLEKHH2Q8IVE3 1493 aa16.25■□□□□ 0.19
TNRC18-209ENST00000464852 KIAA1107Q9UPP5 1409 aa16.24■□□□□ 0.19
TNRC18-209ENST00000464852 HNRNPMP52272 730 aaKnown RBP eCLIP16.23■□□□□ 0.19
TNRC18-209ENST00000464852 TSPY4P0CV99 314 aa16.22■□□□□ 0.19
TNRC18-209ENST00000464852 TSPY10P0CW01 314 aa16.22■□□□□ 0.19
TNRC18-209ENST00000464852 ALKQ9UM73 1620 aa16.22■□□□□ 0.19
TNRC18-209ENST00000464852 SAMD9LQ8IVG5 1584 aa16.21■□□□□ 0.19
TNRC18-209ENST00000464852 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
TNRC18-209ENST00000464852 MBD5Q9P267 1494 aa16.2■□□□□ 0.18
TNRC18-209ENST00000464852 ABCC5O15440 1437 aa16.19■□□□□ 0.18
TNRC18-209ENST00000464852 DAPK1P53355 1430 aa16.19■□□□□ 0.18
TNRC18-209ENST00000464852 DNMT1P26358 1616 aaKnown RBP16.19■□□□□ 0.18
TNRC18-209ENST00000464852 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms