RNA–Protein interactions for RNA: ENST00000464424.1

PRDM6-204, Transcript of PR/SET domain 6, humanhuman

TSL 3

Gene PRDM6, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-204ENST00000464424 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.12■□□□□ 0.65
PRDM6-204ENST00000464424 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
PRDM6-204ENST00000464424 MAGI2Q86UL8 1455 aa19.11■□□□□ 0.65
PRDM6-204ENST00000464424 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
PRDM6-204ENST00000464424 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
PRDM6-204ENST00000464424 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
PRDM6-204ENST00000464424 C9orf84Q5VXU9 1444 aa19.03■□□□□ 0.64
PRDM6-204ENST00000464424 PLEKHD1A6NEE1 506 aa19.03■□□□□ 0.64
PRDM6-204ENST00000464424 ATP10AO60312 1499 aa19.02■□□□□ 0.63
PRDM6-204ENST00000464424 LTBP4Q8N2S1 1624 aa19.01■□□□□ 0.63
PRDM6-204ENST00000464424 SCAPERQ9BY12 1400 aa19■□□□□ 0.63
PRDM6-204ENST00000464424 PTPRTO14522 1441 aa19■□□□□ 0.63
PRDM6-204ENST00000464424 IQSEC2Q5JU85 1478 aa18.97■□□□□ 0.63
PRDM6-204ENST00000464424 C3P01024 1663 aa18.96■□□□□ 0.63
PRDM6-204ENST00000464424 SETD1BQ9UPS6 1966 aaKnown RBP18.95■□□□□ 0.62
PRDM6-204ENST00000464424 RANGAP1P46060 587 aaPredicted RBP18.94■□□□□ 0.62
PRDM6-204ENST00000464424 PLCH2O75038 1416 aa18.93■□□□□ 0.62
PRDM6-204ENST00000464424 CDK13Q14004 1512 aaKnown RBP18.93■□□□□ 0.62
PRDM6-204ENST00000464424 MYO5CQ9NQX4 1742 aa18.92■□□□□ 0.62
PRDM6-204ENST00000464424 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.62
PRDM6-204ENST00000464424 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
PRDM6-204ENST00000464424 ZNF518AQ6AHZ1 1483 aa18.88■□□□□ 0.61
PRDM6-204ENST00000464424 KDM5CP41229 1560 aa18.88■□□□□ 0.61
PRDM6-204ENST00000464424 ABCA6Q8N139 1617 aa18.86■□□□□ 0.61
PRDM6-204ENST00000464424 REREQ9P2R6 1566 aa18.85■□□□□ 0.61
PRDM6-204ENST00000464424 KIF14Q15058 1648 aa18.83■□□□□ 0.61
PRDM6-204ENST00000464424 TRAPPC8Q9Y2L5 1435 aa18.83■□□□□ 0.6
PRDM6-204ENST00000464424 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
PRDM6-204ENST00000464424 EFCAB2Q5VUJ9 269 aa18.82■□□□□ 0.6
PRDM6-204ENST00000464424 UBAP1LF5GYI3 381 aa18.81■□□□□ 0.6
PRDM6-204ENST00000464424 AFAP1Q8N556 730 aa18.81■□□□□ 0.6
PRDM6-204ENST00000464424 CSRNP3Q8WYN3 585 aa18.81■□□□□ 0.6
PRDM6-204ENST00000464424 ARHGAP5Q13017 1502 aa18.8■□□□□ 0.6
PRDM6-204ENST00000464424 MYT1LQ9UL68 1186 aa18.8■□□□□ 0.6
PRDM6-204ENST00000464424 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
PRDM6-204ENST00000464424 MED1Q15648 1581 aaPredicted RBP18.78■□□□□ 0.6
PRDM6-204ENST00000464424 AGLP35573 1532 aa18.78■□□□□ 0.6
PRDM6-204ENST00000464424 ESF1Q9H501 851 aaKnown RBP18.77■□□□□ 0.6
PRDM6-204ENST00000464424 MLH3Q9UHC1 1453 aa18.74■□□□□ 0.59
PRDM6-204ENST00000464424 CNTLNQ9NXG0 1405 aa18.73■□□□□ 0.59
PRDM6-204ENST00000464424 NCKAP5LQ9HCH0 1330 aa18.73■□□□□ 0.59
PRDM6-204ENST00000464424 MROH2AA6NES4 1674 aa18.73■□□□□ 0.59
PRDM6-204ENST00000464424 SUPT6HQ7KZ85 1726 aaKnown RBP18.72■□□□□ 0.59
PRDM6-204ENST00000464424 CDC42BPBQ9Y5S2 1711 aa18.72■□□□□ 0.59
PRDM6-204ENST00000464424 MYO3AQ8NEV4 1616 aa18.71■□□□□ 0.58
PRDM6-204ENST00000464424 ZNF142P52746 1687 aaPredicted RBP18.7■□□□□ 0.58
PRDM6-204ENST00000464424 ITSN2Q9NZM3 1697 aa18.7■□□□□ 0.58
PRDM6-204ENST00000464424 NPATQ14207 1427 aa18.7■□□□□ 0.58
PRDM6-204ENST00000464424 KIDINS220Q9ULH0 1771 aa18.7■□□□□ 0.58
PRDM6-204ENST00000464424 ABCC1P33527 1531 aa18.69■□□□□ 0.58
PRDM6-204ENST00000464424 ATP1B4Q9UN42 357 aaPredicted RBP18.69■□□□□ 0.58
PRDM6-204ENST00000464424 TROQ12816 1431 aaPredicted RBP18.67■□□□□ 0.58
PRDM6-204ENST00000464424 PREX2Q70Z35 1606 aa18.67■□□□□ 0.58
PRDM6-204ENST00000464424 PLA2R1Q13018 1463 aa18.66■□□□□ 0.58
PRDM6-204ENST00000464424 HSPA1LP34931 641 aa18.66■□□□□ 0.58
PRDM6-204ENST00000464424 LRRIQ1Q96JM4 1722 aa18.66■□□□□ 0.58
PRDM6-204ENST00000464424 CEP170BQ9Y4F5 1589 aaPredicted RBP18.65■□□□□ 0.58
PRDM6-204ENST00000464424 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
PRDM6-204ENST00000464424 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
PRDM6-204ENST00000464424 TCOF1Q13428 1488 aaKnown RBP18.65■□□□□ 0.58
PRDM6-204ENST00000464424 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
PRDM6-204ENST00000464424 CLIP1P30622 1438 aa18.64■□□□□ 0.57
PRDM6-204ENST00000464424 EEA1Q15075 1411 aa18.63■□□□□ 0.57
PRDM6-204ENST00000464424 FMN1Q68DA7 1419 aa18.63■□□□□ 0.57
PRDM6-204ENST00000464424 PKD2Q13563 968 aa18.62■□□□□ 0.57
PRDM6-204ENST00000464424 ZMYM3Q14202 1370 aa18.62■□□□□ 0.57
PRDM6-204ENST00000464424 PIP4K2BP78356 416 aa18.61■□□□□ 0.57
PRDM6-204ENST00000464424 PPP6R1Q9UPN7 881 aa18.59■□□□□ 0.57
PRDM6-204ENST00000464424 SAMD9LQ8IVG5 1584 aa18.58■□□□□ 0.56
PRDM6-204ENST00000464424 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
PRDM6-204ENST00000464424 CDC42BPAQ5VT25 1732 aa18.57■□□□□ 0.56
PRDM6-204ENST00000464424 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
PRDM6-204ENST00000464424 PTPRKQ15262 1439 aa18.56■□□□□ 0.56
PRDM6-204ENST00000464424 POLR1AO95602 1720 aaPredicted RBP18.55■□□□□ 0.56
PRDM6-204ENST00000464424 CPS1P31327 1500 aa18.54■□□□□ 0.56
PRDM6-204ENST00000464424 TOM1O60784 492 aa18.53■□□□□ 0.56
PRDM6-204ENST00000464424 DNMT1P26358 1616 aaKnown RBP18.52■□□□□ 0.56
PRDM6-204ENST00000464424 PLXNC1O60486 1568 aa18.52■□□□□ 0.56
PRDM6-204ENST00000464424 SYCP2Q9BX26 1530 aa18.52■□□□□ 0.56
PRDM6-204ENST00000464424 NEURL4Q96JN8 1562 aa18.51■□□□□ 0.55
PRDM6-204ENST00000464424 ALKQ9UM73 1620 aa18.5■□□□□ 0.55
PRDM6-204ENST00000464424 A2ML1A8K2U0 1454 aa18.5■□□□□ 0.55
PRDM6-204ENST00000464424 ATP7AQ04656 1500 aa18.49■□□□□ 0.55
PRDM6-204ENST00000464424 SHANK2Q9UPX8 1470 aa18.49■□□□□ 0.55
PRDM6-204ENST00000464424 INO80Q9ULG1 1556 aaPredicted RBP18.48■□□□□ 0.55
PRDM6-204ENST00000464424 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
PRDM6-204ENST00000464424 SPAG9O60271 1321 aaKnown RBP18.47■□□□□ 0.55
PRDM6-204ENST00000464424 A2MP01023 1474 aa18.46■□□□□ 0.55
PRDM6-204ENST00000464424 VWDEQ8N2E2 1590 aa18.45■□□□□ 0.54
PRDM6-204ENST00000464424 GGT6Q6P531 493 aa18.44■□□□□ 0.54
PRDM6-204ENST00000464424 ZNF777Q9ULD5 760 aaPredicted RBP18.44■□□□□ 0.54
PRDM6-204ENST00000464424 SENP3Q9H4L4 574 aaPredicted RBP18.43■□□□□ 0.54
PRDM6-204ENST00000464424 CCDC18Q5T9S5 1454 aa18.43■□□□□ 0.54
PRDM6-204ENST00000464424 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
PRDM6-204ENST00000464424 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
PRDM6-204ENST00000464424 ADGBQ8N7X0 1667 aa18.41■□□□□ 0.54
PRDM6-204ENST00000464424 CASKIN1Q8WXD9 1431 aa18.37■□□□□ 0.53
PRDM6-204ENST00000464424 GPATCH8Q9UKJ3 1502 aaKnown RBP18.37■□□□□ 0.53
PRDM6-204ENST00000464424 RNF17Q9BXT8 1623 aaKnown RBP18.37■□□□□ 0.53
PRDM6-204ENST00000464424 STRCP1A6NGW2 1772 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms