RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 FTSJ3Q8IY81 847 aaKnown RBP11.81□□□□□ -0.52
HPS4-208ENST00000464362 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
HPS4-208ENST00000464362 ANP32BQ92688 251 aaKnown RBP11.8□□□□□ -0.52
HPS4-208ENST00000464362 ROCK2O75116 1388 aaKnown RBP11.8□□□□□ -0.52
HPS4-208ENST00000464362 BECN1Q14457 450 aa11.8□□□□□ -0.52
HPS4-208ENST00000464362 CCDC18Q5T9S5 1454 aa11.79□□□□□ -0.52
HPS4-208ENST00000464362 TPRNQ4KMQ1 711 aa11.79□□□□□ -0.52
HPS4-208ENST00000464362 CCDC146Q8IYE0 955 aa11.79□□□□□ -0.52
HPS4-208ENST00000464362 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
HPS4-208ENST00000464362 SLC4A3P48751 1232 aa11.79□□□□□ -0.52
HPS4-208ENST00000464362 CCDC184Q52MB2 194 aa11.78□□□□□ -0.52
HPS4-208ENST00000464362 EXOC6Q8TAG9 804 aa11.78□□□□□ -0.52
HPS4-208ENST00000464362 KTN1Q86UP2 1357 aaKnown RBP11.78□□□□□ -0.52
HPS4-208ENST00000464362 WASHC2AQ641Q2 1341 aa11.78□□□□□ -0.52
HPS4-208ENST00000464362 CFAP53Q96M91 514 aa11.77□□□□□ -0.52
HPS4-208ENST00000464362 RAD54L2Q9Y4B4 1467 aa11.77□□□□□ -0.53
HPS4-208ENST00000464362 SLKQ9H2G2 1235 aaPredicted RBP11.77□□□□□ -0.53
HPS4-208ENST00000464362 ERICH6BQ5W0A0 696 aa11.76□□□□□ -0.53
HPS4-208ENST00000464362 CLUAP1Q96AJ1 413 aa11.75□□□□□ -0.53
HPS4-208ENST00000464362 IPO9Q96P70 1041 aaKnown RBP11.75□□□□□ -0.53
HPS4-208ENST00000464362 ERCC6Q03468 1493 aa11.74□□□□□ -0.53
HPS4-208ENST00000464362 ZBTB7CA1YPR0 619 aa11.74□□□□□ -0.53
HPS4-208ENST00000464362 NCLP19338 710 aaKnown RBP11.74□□□□□ -0.53
HPS4-208ENST00000464362 GGT6Q6P531 493 aa11.74□□□□□ -0.53
HPS4-208ENST00000464362 NLRP13Q86W25 1043 aa11.74□□□□□ -0.53
HPS4-208ENST00000464362 FGD5Q6ZNL6 1462 aa11.73□□□□□ -0.53
HPS4-208ENST00000464362 MYH16Q9H6N6 1097 aa11.73□□□□□ -0.53
HPS4-208ENST00000464362 STK26Q9P289 416 aa11.73□□□□□ -0.53
HPS4-208ENST00000464362 KIF7Q2M1P5 1343 aa11.73□□□□□ -0.53
HPS4-208ENST00000464362 SOX12O15370 315 aa11.73□□□□□ -0.53
HPS4-208ENST00000464362 RALBP1Q15311 655 aa11.73□□□□□ -0.53
HPS4-208ENST00000464362 NUTM2DQ5VT03 806 aaPredicted RBP11.72□□□□□ -0.53
HPS4-208ENST00000464362 MORC1Q86VD1 984 aa11.72□□□□□ -0.53
HPS4-208ENST00000464362 ZBED9Q6R2W3 1325 aa11.72□□□□□ -0.53
HPS4-208ENST00000464362 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
HPS4-208ENST00000464362 PRDM2Q13029 1718 aa11.72□□□□□ -0.53
HPS4-208ENST00000464362 ANKRD30AQ9BXX3 1397 aa11.72□□□□□ -0.53
HPS4-208ENST00000464362 PANK3Q9H999 370 aa11.72□□□□□ -0.53
HPS4-208ENST00000464362 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
HPS4-208ENST00000464362 FGD6Q6ZV73 1430 aa11.71□□□□□ -0.53
HPS4-208ENST00000464362 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
HPS4-208ENST00000464362 USP47Q96K76 1375 aa11.71□□□□□ -0.53
HPS4-208ENST00000464362 POGKQ9P215 609 aa11.71□□□□□ -0.53
HPS4-208ENST00000464362 TCERG1O14776 1098 aaKnown RBP11.71□□□□□ -0.54
HPS4-208ENST00000464362 C14orf37Q86TY3 774 aa11.71□□□□□ -0.54
HPS4-208ENST00000464362 RRP7AQ9Y3A4 280 aaKnown RBP11.71□□□□□ -0.54
HPS4-208ENST00000464362 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
HPS4-208ENST00000464362 BCL2L13Q9BXK5 485 aa11.7□□□□□ -0.54
HPS4-208ENST00000464362 JPH4Q96JJ6 628 aa11.7□□□□□ -0.54
HPS4-208ENST00000464362 GZF1Q9H116 711 aaPredicted RBP11.7□□□□□ -0.54
HPS4-208ENST00000464362 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
HPS4-208ENST00000464362 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
HPS4-208ENST00000464362 U2AF1L5P0DN76 240 aaPredicted RBP11.69□□□□□ -0.54
HPS4-208ENST00000464362 PDE4AP27815 886 aa11.69□□□□□ -0.54
HPS4-208ENST00000464362 U2AF1Q01081 240 aaKnown RBP eCLIP11.69□□□□□ -0.546e-11■■■■□ 21.2
HPS4-208ENST00000464362 NBPF8Q3BBV2 869 aa11.69□□□□□ -0.54
HPS4-208ENST00000464362 CCDC7Q96M83 1385 aa11.68□□□□□ -0.54
HPS4-208ENST00000464362 PDS5BQ9NTI5 1447 aa11.68□□□□□ -0.54
HPS4-208ENST00000464362 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
HPS4-208ENST00000464362 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
HPS4-208ENST00000464362 APBB1O00213 710 aa11.67□□□□□ -0.54
HPS4-208ENST00000464362 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
HPS4-208ENST00000464362 RRP1P56182 461 aaKnown RBP11.67□□□□□ -0.54
HPS4-208ENST00000464362 KIF3BO15066 747 aa11.66□□□□□ -0.54
HPS4-208ENST00000464362 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
HPS4-208ENST00000464362 MLECQ14165 292 aa11.66□□□□□ -0.54
HPS4-208ENST00000464362 WDR97A6NE52 1622 aa11.66□□□□□ -0.54
HPS4-208ENST00000464362 UACAQ9BZF9 1416 aa11.66□□□□□ -0.54
HPS4-208ENST00000464362 CDCA7LQ96GN5 454 aa11.66□□□□□ -0.54
HPS4-208ENST00000464362 ARID4BQ4LE39 1312 aaPredicted RBP11.65□□□□□ -0.54
HPS4-208ENST00000464362 PRXQ9BXM0 1461 aa11.65□□□□□ -0.54
HPS4-208ENST00000464362 DNAJC5BQ9UF47 199 aa11.65□□□□□ -0.54
HPS4-208ENST00000464362 FANCIQ9NVI1 1328 aa11.64□□□□□ -0.55
HPS4-208ENST00000464362 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
HPS4-208ENST00000464362 TRAK1Q9UPV9 953 aa11.63□□□□□ -0.55
HPS4-208ENST00000464362 MYOM3Q5VTT5 1437 aa11.63□□□□□ -0.55
HPS4-208ENST00000464362 KIF15Q9NS87 1388 aa11.63□□□□□ -0.55
HPS4-208ENST00000464362 PAK3O75914 559 aaPredicted RBP11.63□□□□□ -0.55
HPS4-208ENST00000464362 APAF1O14727 1248 aa11.63□□□□□ -0.55
HPS4-208ENST00000464362 CARMIL2Q6F5E8 1435 aa11.62□□□□□ -0.55
HPS4-208ENST00000464362 HSP90AB1P08238 724 aaKnown RBP11.62□□□□□ -0.55
HPS4-208ENST00000464362 CFTRP13569 1480 aa11.62□□□□□ -0.55
HPS4-208ENST00000464362 C11orf95C9JLR9 678 aaPredicted RBP11.62□□□□□ -0.55
HPS4-208ENST00000464362 EFCAB2Q5VUJ9 269 aa11.61□□□□□ -0.55
HPS4-208ENST00000464362 AKNAQ7Z591 1439 aa11.61□□□□□ -0.55
HPS4-208ENST00000464362 ITPRIPQ8IWB1 547 aa11.61□□□□□ -0.55
HPS4-208ENST00000464362 GOLGA6L22H0YM25 854 aa11.6□□□□□ -0.55
HPS4-208ENST00000464362 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
HPS4-208ENST00000464362 COG6Q9Y2V7 657 aa11.6□□□□□ -0.55
HPS4-208ENST00000464362 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
HPS4-208ENST00000464362 PDE3BQ13370 1112 aa11.6□□□□□ -0.55
HPS4-208ENST00000464362 CNTLNQ9NXG0 1405 aa11.6□□□□□ -0.55
HPS4-208ENST00000464362 FOXD4L1Q9NU39 408 aa11.59□□□□□ -0.55
HPS4-208ENST00000464362 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
HPS4-208ENST00000464362 NBPF1Q3BBV0 1214 aa11.58□□□□□ -0.56
HPS4-208ENST00000464362 GAPVD1Q14C86 1478 aa11.58□□□□□ -0.56
HPS4-208ENST00000464362 AQRO60306 1485 aaKnown RBP eCLIP11.58□□□□□ -0.563e-8■■■■□ 23.3
HPS4-208ENST00000464362 ELL2O00472 640 aaPredicted RBP11.58□□□□□ -0.56
HPS4-208ENST00000464362 SKAP1Q86WV1 359 aa11.57□□□□□ -0.56
HPS4-208ENST00000464362 HSCBQ8IWL3 235 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms