RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ABCC5O15440 1437 aa29.08■■■□□ 2.25
TUBGCP3-204ENST00000464139 DNMT1P26358 1616 aaKnown RBP29.05■■■□□ 2.24
TUBGCP3-204ENST00000464139 MPHOSPH9Q99550 1183 aa29.03■■■□□ 2.24
TUBGCP3-204ENST00000464139 ROCK1Q13464 1354 aa29.01■■■□□ 2.23
TUBGCP3-204ENST00000464139 KIF14Q15058 1648 aa29.01■■■□□ 2.23
TUBGCP3-204ENST00000464139 CFDP1Q9UEE9 299 aaPredicted RBP29■■■□□ 2.23
TUBGCP3-204ENST00000464139 KDM5BQ9UGL1 1544 aa29■■■□□ 2.23
TUBGCP3-204ENST00000464139 FOXD1Q16676 465 aa28.99■■■□□ 2.23
TUBGCP3-204ENST00000464139 KCNH8Q96L42 1107 aa28.98■■■□□ 2.23
TUBGCP3-204ENST00000464139 GPATCH8Q9UKJ3 1502 aaKnown RBP28.97■■■□□ 2.23
TUBGCP3-204ENST00000464139 ZNF777Q9ULD5 760 aaPredicted RBP28.97■■■□□ 2.23
TUBGCP3-204ENST00000464139 CAMSAP2Q08AD1 1489 aa28.96■■■□□ 2.23
TUBGCP3-204ENST00000464139 ADCY10Q96PN6 1610 aa28.93■■■□□ 2.22
TUBGCP3-204ENST00000464139 ABCA8O94911 1581 aa28.93■■■□□ 2.22
TUBGCP3-204ENST00000464139 ITSN2Q9NZM3 1697 aa28.93■■■□□ 2.22
TUBGCP3-204ENST00000464139 PLEKHD1A6NEE1 506 aa28.9■■■□□ 2.22
TUBGCP3-204ENST00000464139 ATP10BO94823 1461 aa28.89■■■□□ 2.21
TUBGCP3-204ENST00000464139 SLC4A1APQ9BWU0 796 aaKnown RBP28.83■■■□□ 2.21
TUBGCP3-204ENST00000464139 L3MBTL2Q969R5 705 aa28.82■■■□□ 2.2
TUBGCP3-204ENST00000464139 NCOA1Q15788 1441 aa28.82■■■□□ 2.2
TUBGCP3-204ENST00000464139 ANKRD30BQ9BXX2 1392 aa28.81■■■□□ 2.2
TUBGCP3-204ENST00000464139 PTPRGP23470 1445 aa28.8■■■□□ 2.2
TUBGCP3-204ENST00000464139 CHD1O14646 1710 aa28.79■■■□□ 2.2
TUBGCP3-204ENST00000464139 CDC42BPAQ5VT25 1732 aa28.79■■■□□ 2.2
TUBGCP3-204ENST00000464139 ADGBQ8N7X0 1667 aa28.78■■■□□ 2.2
TUBGCP3-204ENST00000464139 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
TUBGCP3-204ENST00000464139 CROCC2H7BZ55 1655 aa28.76■■■□□ 2.19
TUBGCP3-204ENST00000464139 ANP32CO43423 234 aa28.74■■■□□ 2.19
TUBGCP3-204ENST00000464139 HSPA5P11021 654 aaKnown RBP28.74■■■□□ 2.19
TUBGCP3-204ENST00000464139 ADGRL2O95490 1459 aa28.74■■■□□ 2.19
TUBGCP3-204ENST00000464139 RPRD2Q5VT52 1461 aaKnown RBP28.73■■■□□ 2.19
TUBGCP3-204ENST00000464139 PZPP20742 1482 aa28.72■■■□□ 2.19
TUBGCP3-204ENST00000464139 ANKRD30AQ9BXX3 1397 aa28.72■■■□□ 2.19
TUBGCP3-204ENST00000464139 EIF4G2P78344 907 aaKnown RBP eCLIP28.66■■■□□ 2.181e-6■■■■■ 34.1
TUBGCP3-204ENST00000464139 TEX14Q8IWB6 1497 aa28.65■■■□□ 2.18
TUBGCP3-204ENST00000464139 NBPF8Q3BBV2 869 aa28.65■■■□□ 2.18
TUBGCP3-204ENST00000464139 CCER2I3L3R5 266 aa28.64■■■□□ 2.18
TUBGCP3-204ENST00000464139 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.18
TUBGCP3-204ENST00000464139 C9orf84Q5VXU9 1444 aa28.63■■■□□ 2.17
TUBGCP3-204ENST00000464139 WASHC2AQ641Q2 1341 aa28.63■■■□□ 2.17
TUBGCP3-204ENST00000464139 HNRNPMP52272 730 aaKnown RBP eCLIP28.63■■■□□ 2.174e-6■■■□□ 16
TUBGCP3-204ENST00000464139 TSPY4P0CV99 314 aa28.6■■■□□ 2.17
TUBGCP3-204ENST00000464139 TSPY10P0CW01 314 aa28.6■■■□□ 2.17
TUBGCP3-204ENST00000464139 PKD2Q13563 968 aa28.6■■■□□ 2.17
TUBGCP3-204ENST00000464139 SHROOM2Q13796 1616 aa28.59■■■□□ 2.17
TUBGCP3-204ENST00000464139 PELP1Q8IZL8 1130 aaKnown RBP28.59■■■□□ 2.17
TUBGCP3-204ENST00000464139 SHANK2Q9UPX8 1470 aa28.59■■■□□ 2.17
TUBGCP3-204ENST00000464139 KIAA1107Q9UPP5 1409 aa28.58■■■□□ 2.17
TUBGCP3-204ENST00000464139 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
TUBGCP3-204ENST00000464139 CDC42BPBQ9Y5S2 1711 aa28.53■■■□□ 2.16
TUBGCP3-204ENST00000464139 NUP155O75694 1391 aa28.53■■■□□ 2.16
TUBGCP3-204ENST00000464139 MBD5Q9P267 1494 aa28.53■■■□□ 2.16
TUBGCP3-204ENST00000464139 C11orf95C9JLR9 678 aaPredicted RBP28.52■■■□□ 2.16
TUBGCP3-204ENST00000464139 SAMD9LQ8IVG5 1584 aa28.51■■■□□ 2.15
TUBGCP3-204ENST00000464139 ARHGEF5Q12774 1597 aa28.5■■■□□ 2.15
TUBGCP3-204ENST00000464139 KIF15Q9NS87 1388 aa28.5■■■□□ 2.15
TUBGCP3-204ENST00000464139 SUPT16HQ9Y5B9 1047 aaKnown RBP28.5■■■□□ 2.15
TUBGCP3-204ENST00000464139 PREX2Q70Z35 1606 aa28.5■■■□□ 2.15
TUBGCP3-204ENST00000464139 CCDC141Q6ZP82 1450 aa28.45■■■□□ 2.14
TUBGCP3-204ENST00000464139 TTC37Q6PGP7 1564 aa28.45■■■□□ 2.14
TUBGCP3-204ENST00000464139 ABCC2Q92887 1545 aa28.44■■■□□ 2.14
TUBGCP3-204ENST00000464139 CCDC7Q96M83 1385 aa28.43■■■□□ 2.14
TUBGCP3-204ENST00000464139 ZNF326Q5BKZ1 582 aaKnown RBP28.43■■■□□ 2.14
TUBGCP3-204ENST00000464139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.42■■■□□ 2.14
TUBGCP3-204ENST00000464139 SPATA31E1Q6ZUB1 1445 aa28.41■■■□□ 2.14
TUBGCP3-204ENST00000464139 ARHGAP5Q13017 1502 aa28.4■■■□□ 2.14
TUBGCP3-204ENST00000464139 CNTLNQ9NXG0 1405 aa28.4■■■□□ 2.14
TUBGCP3-204ENST00000464139 SYCP2Q9BX26 1530 aa28.39■■■□□ 2.13
TUBGCP3-204ENST00000464139 KDM5DQ9BY66 1539 aa28.38■■■□□ 2.13
TUBGCP3-204ENST00000464139 RSPH4AQ5TD94 716 aa28.37■■■□□ 2.13
TUBGCP3-204ENST00000464139 KIF7Q2M1P5 1343 aa28.34■■■□□ 2.13
TUBGCP3-204ENST00000464139 CLASP1Q7Z460 1538 aa28.34■■■□□ 2.13
TUBGCP3-204ENST00000464139 MYO5CQ9NQX4 1742 aa28.31■■■□□ 2.12
TUBGCP3-204ENST00000464139 ZCCHC11Q5TAX3 1644 aaKnown RBP28.27■■■□□ 2.12
TUBGCP3-204ENST00000464139 FAM135AQ9P2D6 1515 aa28.27■■■□□ 2.12
TUBGCP3-204ENST00000464139 USP47Q96K76 1375 aa28.27■■■□□ 2.12
TUBGCP3-204ENST00000464139 POLR1AO95602 1720 aaPredicted RBP28.26■■■□□ 2.11
TUBGCP3-204ENST00000464139 KDM2AQ9Y2K7 1162 aa28.25■■■□□ 2.11
TUBGCP3-204ENST00000464139 MAST1Q9Y2H9 1570 aa28.24■■■□□ 2.11
TUBGCP3-204ENST00000464139 CCDC184Q52MB2 194 aa28.24■■■□□ 2.11
TUBGCP3-204ENST00000464139 PRKRIP1Q9H875 184 aaPredicted RBP28.24■■■□□ 2.11
TUBGCP3-204ENST00000464139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.24■■■□□ 2.11
TUBGCP3-204ENST00000464139 UHRF1BP1Q6BDS2 1440 aa28.23■■■□□ 2.11
TUBGCP3-204ENST00000464139 ARHGEF12Q9NZN5 1544 aa28.22■■■□□ 2.11
TUBGCP3-204ENST00000464139 HNRNPUQ00839 825 aaKnown RBP eCLIP28.21■■■□□ 2.11
TUBGCP3-204ENST00000464139 UHRF1BP1LA0JNW5 1464 aa28.21■■■□□ 2.11
TUBGCP3-204ENST00000464139 PLEKHH2Q8IVE3 1493 aa28.21■■■□□ 2.11
TUBGCP3-204ENST00000464139 DCAF11Q8TEB1 546 aa28.2■■■□□ 2.11
TUBGCP3-204ENST00000464139 PLCH2O75038 1416 aa28.2■■■□□ 2.1
TUBGCP3-204ENST00000464139 BCORL1Q5H9F3 1711 aa28.2■■■□□ 2.1
TUBGCP3-204ENST00000464139 FKBP8Q14318 412 aa28.19■■■□□ 2.1
TUBGCP3-204ENST00000464139 POLR3GLQ9BT43 218 aa28.19■■■□□ 2.1
TUBGCP3-204ENST00000464139 KDM5CP41229 1560 aa28.19■■■□□ 2.1
TUBGCP3-204ENST00000464139 RALGAPBQ86X10 1494 aa28.17■■■□□ 2.1
TUBGCP3-204ENST00000464139 EFCAB2Q5VUJ9 269 aa28.16■■■□□ 2.1
TUBGCP3-204ENST00000464139 CARD11Q9BXL7 1154 aa28.16■■■□□ 2.1
TUBGCP3-204ENST00000464139 PLXNC1O60486 1568 aa28.15■■■□□ 2.1
TUBGCP3-204ENST00000464139 BCANQ96GW7 911 aa28.15■■■□□ 2.1
TUBGCP3-204ENST00000464139 UNC13BO14795 1591 aa28.15■■■□□ 2.1
TUBGCP3-204ENST00000464139 CCDC144AA2RUR9 1427 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms