RNA–Protein interactions for RNA: ENST00000462616.1

PMPCA-205, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 3,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-205ENST00000462616 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
PMPCA-205ENST00000462616 CASKIN1Q8WXD9 1431 aa17.99■□□□□ 0.47
PMPCA-205ENST00000462616 NUP160Q12769 1436 aa17.98■□□□□ 0.47
PMPCA-205ENST00000462616 MPHOSPH9Q99550 1183 aa17.98■□□□□ 0.47
PMPCA-205ENST00000462616 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
PMPCA-205ENST00000462616 ANP32AP39687 249 aaKnown RBP17.97■□□□□ 0.47
PMPCA-205ENST00000462616 ZBED9Q6R2W3 1325 aa17.96■□□□□ 0.47
PMPCA-205ENST00000462616 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
PMPCA-205ENST00000462616 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
PMPCA-205ENST00000462616 CEP170Q5SW79 1584 aa17.95■□□□□ 0.46
PMPCA-205ENST00000462616 CNTLNQ9NXG0 1405 aa17.95■□□□□ 0.46
PMPCA-205ENST00000462616 CFAP43Q8NDM7 1665 aa17.94■□□□□ 0.46
PMPCA-205ENST00000462616 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
PMPCA-205ENST00000462616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.94■□□□□ 0.46
PMPCA-205ENST00000462616 AKNAQ7Z591 1439 aa17.94■□□□□ 0.46
PMPCA-205ENST00000462616 CCDC7Q96M83 1385 aa17.93■□□□□ 0.46
PMPCA-205ENST00000462616 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
PMPCA-205ENST00000462616 MYT1LQ9UL68 1186 aa17.93■□□□□ 0.46
PMPCA-205ENST00000462616 ZBTB47Q9UFB7 747 aaPredicted RBP17.93■□□□□ 0.46
PMPCA-205ENST00000462616 PTPN23Q9H3S7 1636 aa17.93■□□□□ 0.46
PMPCA-205ENST00000462616 IQGAP2Q13576 1575 aa17.92■□□□□ 0.46
PMPCA-205ENST00000462616 EFCAB5A4FU69 1503 aa17.91■□□□□ 0.46
PMPCA-205ENST00000462616 KIAA0586Q9BVV6 1533 aa17.91■□□□□ 0.46
PMPCA-205ENST00000462616 NCOA2Q15596 1464 aa17.91■□□□□ 0.46
PMPCA-205ENST00000462616 SAMD9Q5K651 1589 aa17.91■□□□□ 0.46
PMPCA-205ENST00000462616 KIF7Q2M1P5 1343 aa17.9■□□□□ 0.46
PMPCA-205ENST00000462616 MYOM3Q5VTT5 1437 aa17.9■□□□□ 0.46
PMPCA-205ENST00000462616 UGGT2Q9NYU1 1516 aa17.89■□□□□ 0.45
PMPCA-205ENST00000462616 SLC4A1APQ9BWU0 796 aaKnown RBP17.88■□□□□ 0.45
PMPCA-205ENST00000462616 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
PMPCA-205ENST00000462616 CLASP1Q7Z460 1538 aa17.87■□□□□ 0.45
PMPCA-205ENST00000462616 RTN4Q9NQC3 1192 aaKnown RBP17.87■□□□□ 0.45
PMPCA-205ENST00000462616 IPO9Q96P70 1041 aaKnown RBP17.85■□□□□ 0.45
PMPCA-205ENST00000462616 TMC1Q8TDI8 760 aa17.84■□□□□ 0.45
PMPCA-205ENST00000462616 KDM5BQ9UGL1 1544 aa17.84■□□□□ 0.45
PMPCA-205ENST00000462616 NUDCQ9Y266 331 aa17.83■□□□□ 0.45
PMPCA-205ENST00000462616 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.45
PMPCA-205ENST00000462616 CHMP7Q8WUX9 453 aaPredicted RBP17.82■□□□□ 0.44
PMPCA-205ENST00000462616 NCOA1Q15788 1441 aa17.8■□□□□ 0.44
PMPCA-205ENST00000462616 KIAA0556O60303 1618 aa17.77■□□□□ 0.43
PMPCA-205ENST00000462616 ZNF644Q9H582 1327 aaPredicted RBP17.76■□□□□ 0.43
PMPCA-205ENST00000462616 ANO8Q9HCE9 1232 aaPredicted RBP17.76■□□□□ 0.43
PMPCA-205ENST00000462616 DENND4BO75064 1496 aaPredicted RBP17.75■□□□□ 0.43
PMPCA-205ENST00000462616 ZNF777Q9ULD5 760 aaPredicted RBP17.75■□□□□ 0.43
PMPCA-205ENST00000462616 IL27Q8NEV9 243 aa17.74■□□□□ 0.43
PMPCA-205ENST00000462616 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
PMPCA-205ENST00000462616 DISP1Q96F81 1524 aa17.74■□□□□ 0.43
PMPCA-205ENST00000462616 KDM6BO15054 1643 aa17.73■□□□□ 0.43
PMPCA-205ENST00000462616 EXOC6Q8TAG9 804 aa17.73■□□□□ 0.43
PMPCA-205ENST00000462616 NEFMP07197 916 aa17.72■□□□□ 0.43
PMPCA-205ENST00000462616 SMG6Q86US8 1419 aaKnown RBP17.71■□□□□ 0.43
PMPCA-205ENST00000462616 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
PMPCA-205ENST00000462616 SKAP1Q86WV1 359 aa17.69■□□□□ 0.42
PMPCA-205ENST00000462616 ANKRD30BQ9BXX2 1392 aa17.68■□□□□ 0.42
PMPCA-205ENST00000462616 PNISRQ8TF01 805 aaKnown RBP17.67■□□□□ 0.42
PMPCA-205ENST00000462616 USP47Q96K76 1375 aa17.66■□□□□ 0.42
PMPCA-205ENST00000462616 MAGI3Q5TCQ9 1506 aa17.66■□□□□ 0.42
PMPCA-205ENST00000462616 CARD11Q9BXL7 1154 aa17.65■□□□□ 0.42
PMPCA-205ENST00000462616 EHBP1L1Q8N3D4 1523 aa17.65■□□□□ 0.42
PMPCA-205ENST00000462616 PLIN1O60240 522 aa17.64■□□□□ 0.41
PMPCA-205ENST00000462616 PDE4AP27815 886 aa17.64■□□□□ 0.41
PMPCA-205ENST00000462616 FBLN2P98095 1184 aa17.64■□□□□ 0.41
PMPCA-205ENST00000462616 PKD2Q13563 968 aa17.64■□□□□ 0.41
PMPCA-205ENST00000462616 CARMIL2Q6F5E8 1435 aa17.64■□□□□ 0.41
PMPCA-205ENST00000462616 RCAN3Q9UKA8 241 aa17.63■□□□□ 0.41
PMPCA-205ENST00000462616 RRP1P56182 461 aaKnown RBP17.62■□□□□ 0.41
PMPCA-205ENST00000462616 CDK13Q14004 1512 aaKnown RBP17.62■□□□□ 0.41
PMPCA-205ENST00000462616 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.62■□□□□ 0.41
PMPCA-205ENST00000462616 DHX29Q7Z478 1369 aaKnown RBP17.62■□□□□ 0.41
PMPCA-205ENST00000462616 RPRD2Q5VT52 1461 aaKnown RBP17.61■□□□□ 0.41
PMPCA-205ENST00000462616 LRRIQ1Q96JM4 1722 aa17.61■□□□□ 0.41
PMPCA-205ENST00000462616 JPH4Q96JJ6 628 aa17.6■□□□□ 0.41
PMPCA-205ENST00000462616 SPATA31E1Q6ZUB1 1445 aa17.6■□□□□ 0.41
PMPCA-205ENST00000462616 ST20-MTHFSA0A0A6YYL1 179 aa17.59■□□□□ 0.41
PMPCA-205ENST00000462616 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
PMPCA-205ENST00000462616 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
PMPCA-205ENST00000462616 CDCA7LQ96GN5 454 aa17.59■□□□□ 0.41
PMPCA-205ENST00000462616 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.4
PMPCA-205ENST00000462616 HECW1Q76N89 1606 aa17.57■□□□□ 0.4
PMPCA-205ENST00000462616 TCERG1O14776 1098 aaKnown RBP17.57■□□□□ 0.4
PMPCA-205ENST00000462616 OSCARQ8IYS5 282 aa17.57■□□□□ 0.4
PMPCA-205ENST00000462616 CFDP1Q9UEE9 299 aaPredicted RBP17.56■□□□□ 0.4
PMPCA-205ENST00000462616 TEX14Q8IWB6 1497 aa17.56■□□□□ 0.4
PMPCA-205ENST00000462616 ABCA8O94911 1581 aa17.55■□□□□ 0.4
PMPCA-205ENST00000462616 DCAF11Q8TEB1 546 aa17.55■□□□□ 0.4
PMPCA-205ENST00000462616 DAXXQ9UER7 740 aaPredicted RBP17.55■□□□□ 0.4
PMPCA-205ENST00000462616 RAPGEF6Q8TEU7 1601 aa17.54■□□□□ 0.4
PMPCA-205ENST00000462616 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
PMPCA-205ENST00000462616 DAPK1P53355 1430 aa17.53■□□□□ 0.4
PMPCA-205ENST00000462616 CC2D1BQ5T0F9 858 aaKnown RBP17.53■□□□□ 0.4
PMPCA-205ENST00000462616 BACH2Q9BYV9 841 aa17.52■□□□□ 0.4
PMPCA-205ENST00000462616 ERCC6L2Q5T890 1561 aa17.52■□□□□ 0.4
PMPCA-205ENST00000462616 TCOF1Q13428 1488 aaKnown RBP17.52■□□□□ 0.4
PMPCA-205ENST00000462616 ABCC5O15440 1437 aa17.52■□□□□ 0.39
PMPCA-205ENST00000462616 RGL3Q3MIN7 710 aa17.5■□□□□ 0.39
PMPCA-205ENST00000462616 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
PMPCA-205ENST00000462616 GCC2Q8IWJ2 1684 aa17.5■□□□□ 0.39
PMPCA-205ENST00000462616 MIA2Q96PC5 1412 aa17.5■□□□□ 0.39
PMPCA-205ENST00000462616 KIF15Q9NS87 1388 aa17.49■□□□□ 0.39
PMPCA-205ENST00000462616 CRBNQ96SW2 442 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms