RNA–Protein interactions for RNA: ENST00000461349.5

C9orf78-202, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 3

Gene C9orf78, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-202ENST00000461349 HECW1Q76N89 1606 aa21.72■■□□□ 1.07
C9orf78-202ENST00000461349 DMRT2Q9Y5R5 561 aa21.68■■□□□ 1.06
C9orf78-202ENST00000461349 SPATA31D1Q6ZQQ2 1576 aa21.68■■□□□ 1.06
C9orf78-202ENST00000461349 STRCQ7RTU9 1775 aa21.68■■□□□ 1.06
C9orf78-202ENST00000461349 ARHGEF12Q9NZN5 1544 aa21.66■■□□□ 1.06
C9orf78-202ENST00000461349 ATP10AO60312 1499 aa21.63■■□□□ 1.05
C9orf78-202ENST00000461349 SETD1BQ9UPS6 1966 aaKnown RBP21.63■■□□□ 1.05
C9orf78-202ENST00000461349 RANGAP1P46060 587 aaPredicted RBP21.62■■□□□ 1.05
C9orf78-202ENST00000461349 C9orf84Q5VXU9 1444 aa21.62■■□□□ 1.05
C9orf78-202ENST00000461349 SCAPERQ9BY12 1400 aa21.62■■□□□ 1.05
C9orf78-202ENST00000461349 MYO5CQ9NQX4 1742 aa21.6■■□□□ 1.05
C9orf78-202ENST00000461349 UHRF1BP1Q6BDS2 1440 aa21.6■■□□□ 1.05
C9orf78-202ENST00000461349 CSRNP3Q8WYN3 585 aa21.58■■□□□ 1.05
C9orf78-202ENST00000461349 CEBPAP49715 358 aaPredicted RBP21.57■■□□□ 1.04
C9orf78-202ENST00000461349 PLCH2O75038 1416 aa21.56■■□□□ 1.04
C9orf78-202ENST00000461349 CDK13Q14004 1512 aaKnown RBP21.53■■□□□ 1.04
C9orf78-202ENST00000461349 C3P01024 1663 aa21.51■■□□□ 1.03
C9orf78-202ENST00000461349 PTPRTO14522 1441 aa21.51■■□□□ 1.03
C9orf78-202ENST00000461349 ZNF518AQ6AHZ1 1483 aa21.5■■□□□ 1.03
C9orf78-202ENST00000461349 EFCAB2Q5VUJ9 269 aa21.49■■□□□ 1.03
C9orf78-202ENST00000461349 IQSEC2Q5JU85 1478 aa21.48■■□□□ 1.03
C9orf78-202ENST00000461349 KDM5CP41229 1560 aa21.46■■□□□ 1.03
C9orf78-202ENST00000461349 MYT1LQ9UL68 1186 aa21.46■■□□□ 1.03
C9orf78-202ENST00000461349 LTBP4Q8N2S1 1624 aa21.45■■□□□ 1.02
C9orf78-202ENST00000461349 REREQ9P2R6 1566 aa21.44■■□□□ 1.02
C9orf78-202ENST00000461349 DIP2CQ9Y2E4 1556 aa21.44■■□□□ 1.02
C9orf78-202ENST00000461349 KIF14Q15058 1648 aa21.44■■□□□ 1.02
C9orf78-202ENST00000461349 ESF1Q9H501 851 aaKnown RBP21.43■■□□□ 1.02
C9orf78-202ENST00000461349 ARHGAP5Q13017 1502 aa21.42■■□□□ 1.02
C9orf78-202ENST00000461349 EEA1Q15075 1411 aa21.42■■□□□ 1.02
C9orf78-202ENST00000461349 ABCA6Q8N139 1617 aa21.4■■□□□ 1.02
C9orf78-202ENST00000461349 CDK11AQ9UQ88 783 aaPredicted RBP21.4■■□□□ 1.02
C9orf78-202ENST00000461349 ATP1B4Q9UN42 357 aaPredicted RBP21.39■■□□□ 1.01
C9orf78-202ENST00000461349 AFAP1Q8N556 730 aa21.38■■□□□ 1.01
C9orf78-202ENST00000461349 TRAPPC8Q9Y2L5 1435 aa21.38■■□□□ 1.01
C9orf78-202ENST00000461349 NCOA1Q15788 1441 aa21.36■■□□□ 1.01
C9orf78-202ENST00000461349 AGLP35573 1532 aa21.35■■□□□ 1.01
C9orf78-202ENST00000461349 CDC42BPBQ9Y5S2 1711 aa21.35■■□□□ 1.01
C9orf78-202ENST00000461349 FMN1Q68DA7 1419 aa21.34■■□□□ 1.01
C9orf78-202ENST00000461349 MLH3Q9UHC1 1453 aa21.33■■□□□ 1.01
C9orf78-202ENST00000461349 SUPT6HQ7KZ85 1726 aaKnown RBP21.33■■□□□ 1.01
C9orf78-202ENST00000461349 CLIP1P30622 1438 aa21.33■■□□□ 1.01
C9orf78-202ENST00000461349 CAMSAP1Q5T5Y3 1602 aa21.33■■□□□ 1
C9orf78-202ENST00000461349 CNTLNQ9NXG0 1405 aa21.32■■□□□ 1
C9orf78-202ENST00000461349 MROH2AA6NES4 1674 aa21.31■■□□□ 1
C9orf78-202ENST00000461349 ITSN2Q9NZM3 1697 aa21.31■■□□□ 1
C9orf78-202ENST00000461349 TROQ12816 1431 aaPredicted RBP21.3■■□□□ 1
C9orf78-202ENST00000461349 PREX2Q70Z35 1606 aa21.29■■□□□ 1
C9orf78-202ENST00000461349 ABCC1P33527 1531 aa21.27■■□□□ 1
C9orf78-202ENST00000461349 KIDINS220Q9ULH0 1771 aa21.27■■□□□ 1
C9orf78-202ENST00000461349 LRRIQ1Q96JM4 1722 aa21.26■□□□□ 0.99
C9orf78-202ENST00000461349 UBAP1LF5GYI3 381 aa21.26■□□□□ 0.99
C9orf78-202ENST00000461349 NPATQ14207 1427 aa21.25■□□□□ 0.99
C9orf78-202ENST00000461349 ZNF142P52746 1687 aaPredicted RBP21.23■□□□□ 0.99
C9orf78-202ENST00000461349 ZNF335Q9H4Z2 1342 aaPredicted RBP21.22■□□□□ 0.99
C9orf78-202ENST00000461349 MYO3AQ8NEV4 1616 aa21.21■□□□□ 0.99
C9orf78-202ENST00000461349 NCKAP5LQ9HCH0 1330 aa21.2■□□□□ 0.98
C9orf78-202ENST00000461349 CLTCQ00610 1675 aaKnown RBP21.19■□□□□ 0.98
C9orf78-202ENST00000461349 CDC42BPAQ5VT25 1732 aa21.19■□□□□ 0.98
C9orf78-202ENST00000461349 ARHGAP35Q9NRY4 1499 aa21.19■□□□□ 0.98
C9orf78-202ENST00000461349 PLA2R1Q13018 1463 aa21.17■□□□□ 0.98
C9orf78-202ENST00000461349 CEP170BQ9Y4F5 1589 aaPredicted RBP21.16■□□□□ 0.98
C9orf78-202ENST00000461349 ZMYM3Q14202 1370 aa21.16■□□□□ 0.98
C9orf78-202ENST00000461349 UBTFP17480 764 aaKnown RBP21.16■□□□□ 0.98
C9orf78-202ENST00000461349 PKD2Q13563 968 aa21.16■□□□□ 0.98
C9orf78-202ENST00000461349 MED1Q15648 1581 aaPredicted RBP21.14■□□□□ 0.98
C9orf78-202ENST00000461349 SAMD9LQ8IVG5 1584 aa21.14■□□□□ 0.98
C9orf78-202ENST00000461349 TCOF1Q13428 1488 aaKnown RBP21.12■□□□□ 0.97
C9orf78-202ENST00000461349 EHMT2Q96KQ7 1210 aa21.11■□□□□ 0.97
C9orf78-202ENST00000461349 CCDC18Q5T9S5 1454 aa21.11■□□□□ 0.97
C9orf78-202ENST00000461349 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
C9orf78-202ENST00000461349 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
C9orf78-202ENST00000461349 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
C9orf78-202ENST00000461349 ATP7AQ04656 1500 aa21.07■□□□□ 0.96
C9orf78-202ENST00000461349 SYCP2Q9BX26 1530 aa21.07■□□□□ 0.96
C9orf78-202ENST00000461349 SPAG9O60271 1321 aaKnown RBP21.06■□□□□ 0.96
C9orf78-202ENST00000461349 ZNF777Q9ULD5 760 aaPredicted RBP21.06■□□□□ 0.96
C9orf78-202ENST00000461349 PLXNC1O60486 1568 aa21.06■□□□□ 0.96
C9orf78-202ENST00000461349 PTPRKQ15262 1439 aa21.05■□□□□ 0.96
C9orf78-202ENST00000461349 HSPA1LP34931 641 aa21.05■□□□□ 0.96
C9orf78-202ENST00000461349 PIP4K2BP78356 416 aa21.05■□□□□ 0.96
C9orf78-202ENST00000461349 TOM1O60784 492 aa21.04■□□□□ 0.96
C9orf78-202ENST00000461349 INO80Q9ULG1 1556 aaPredicted RBP21.04■□□□□ 0.96
C9orf78-202ENST00000461349 CPS1P31327 1500 aa21.04■□□□□ 0.96
C9orf78-202ENST00000461349 ADGBQ8N7X0 1667 aa21.02■□□□□ 0.96
C9orf78-202ENST00000461349 A2MP01023 1474 aa21.02■□□□□ 0.96
C9orf78-202ENST00000461349 DNMT1P26358 1616 aaKnown RBP21.02■□□□□ 0.96
C9orf78-202ENST00000461349 CASKIN1Q8WXD9 1431 aa21.01■□□□□ 0.95
C9orf78-202ENST00000461349 GGT6Q6P531 493 aa21■□□□□ 0.95
C9orf78-202ENST00000461349 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
C9orf78-202ENST00000461349 A2ML1A8K2U0 1454 aa21■□□□□ 0.95
C9orf78-202ENST00000461349 HNRNPMP52272 730 aaKnown RBP eCLIP20.98■□□□□ 0.95
C9orf78-202ENST00000461349 PLEKHH2Q8IVE3 1493 aa20.98■□□□□ 0.95
C9orf78-202ENST00000461349 SHANK2Q9UPX8 1470 aa20.95■□□□□ 0.94
C9orf78-202ENST00000461349 GPATCH8Q9UKJ3 1502 aaKnown RBP20.95■□□□□ 0.94
C9orf78-202ENST00000461349 NEURL4Q96JN8 1562 aa20.95■□□□□ 0.94
C9orf78-202ENST00000461349 KIAA1107Q9UPP5 1409 aa20.94■□□□□ 0.94
C9orf78-202ENST00000461349 FYCO1Q9BQS8 1478 aa20.92■□□□□ 0.94
C9orf78-202ENST00000461349 CFDP1Q9UEE9 299 aaPredicted RBP20.9■□□□□ 0.94
C9orf78-202ENST00000461349 VWDEQ8N2E2 1590 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms