RNA–Protein interactions for RNA: ENST00000461306.1

ITGB5-203, Transcript of integrin subunit beta 5, humanhuman

TSL 4

Gene ITGB5, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-203ENST00000461306 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
ITGB5-203ENST00000461306 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
ITGB5-203ENST00000461306 CEBPAP49715 358 aaPredicted RBP18.05■□□□□ 0.48
ITGB5-203ENST00000461306 EFCAB2Q5VUJ9 269 aa18.05■□□□□ 0.48
ITGB5-203ENST00000461306 PLCH2O75038 1416 aa18.05■□□□□ 0.48
ITGB5-203ENST00000461306 MAGI2Q86UL8 1455 aa18.04■□□□□ 0.48
ITGB5-203ENST00000461306 CERKQ8TCT0 537 aa18.04■□□□□ 0.48
ITGB5-203ENST00000461306 ZMYM4Q5VZL5 1548 aa18.03■□□□□ 0.48
ITGB5-203ENST00000461306 CDK11AQ9UQ88 783 aaPredicted RBP18.01■□□□□ 0.47
ITGB5-203ENST00000461306 ATP10AO60312 1499 aa18.01■□□□□ 0.47
ITGB5-203ENST00000461306 AFAP1Q8N556 730 aa18■□□□□ 0.47
ITGB5-203ENST00000461306 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
ITGB5-203ENST00000461306 C9orf84Q5VXU9 1444 aa17.96■□□□□ 0.47
ITGB5-203ENST00000461306 FMN1Q68DA7 1419 aa17.96■□□□□ 0.47
ITGB5-203ENST00000461306 MYO5CQ9NQX4 1742 aa17.93■□□□□ 0.46
ITGB5-203ENST00000461306 ARHGEF12Q9NZN5 1544 aa17.93■□□□□ 0.46
ITGB5-203ENST00000461306 KIF14Q15058 1648 aa17.92■□□□□ 0.46
ITGB5-203ENST00000461306 ARHGAP35Q9NRY4 1499 aa17.92■□□□□ 0.46
ITGB5-203ENST00000461306 ARHGAP5Q13017 1502 aa17.92■□□□□ 0.46
ITGB5-203ENST00000461306 ILDR2Q71H61 639 aa17.91■□□□□ 0.46
ITGB5-203ENST00000461306 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
ITGB5-203ENST00000461306 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
ITGB5-203ENST00000461306 TROQ12816 1431 aaPredicted RBP17.89■□□□□ 0.46
ITGB5-203ENST00000461306 ZNF518AQ6AHZ1 1483 aa17.89■□□□□ 0.45
ITGB5-203ENST00000461306 ESF1Q9H501 851 aaKnown RBP17.89■□□□□ 0.45
ITGB5-203ENST00000461306 PREX1Q8TCU6 1659 aa17.89■□□□□ 0.45
ITGB5-203ENST00000461306 CLIP1P30622 1438 aa17.89■□□□□ 0.45
ITGB5-203ENST00000461306 UHRF1BP1Q6BDS2 1440 aa17.85■□□□□ 0.45
ITGB5-203ENST00000461306 STRCQ7RTU9 1775 aa17.85■□□□□ 0.45
ITGB5-203ENST00000461306 CHIC1Q5VXU3 224 aa17.83■□□□□ 0.44
ITGB5-203ENST00000461306 SETD1BQ9UPS6 1966 aaKnown RBP17.82■□□□□ 0.44
ITGB5-203ENST00000461306 TRAPPC8Q9Y2L5 1435 aa17.82■□□□□ 0.44
ITGB5-203ENST00000461306 ZNF777Q9ULD5 760 aaPredicted RBP17.82■□□□□ 0.44
ITGB5-203ENST00000461306 KDM5CP41229 1560 aa17.82■□□□□ 0.44
ITGB5-203ENST00000461306 DIP2CQ9Y2E4 1556 aa17.82■□□□□ 0.44
ITGB5-203ENST00000461306 LRRIQ1Q96JM4 1722 aa17.81■□□□□ 0.44
ITGB5-203ENST00000461306 SOCS7O14512 581 aa17.81■□□□□ 0.44
ITGB5-203ENST00000461306 CDC42BPBQ9Y5S2 1711 aa17.81■□□□□ 0.44
ITGB5-203ENST00000461306 MLH3Q9UHC1 1453 aa17.78■□□□□ 0.44
ITGB5-203ENST00000461306 ABCA6Q8N139 1617 aa17.78■□□□□ 0.44
ITGB5-203ENST00000461306 C3P01024 1663 aa17.76■□□□□ 0.43
ITGB5-203ENST00000461306 HNRNPMP52272 730 aaKnown RBP eCLIP17.75■□□□□ 0.43
ITGB5-203ENST00000461306 SPATA31D1Q6ZQQ2 1576 aa17.74■□□□□ 0.43
ITGB5-203ENST00000461306 PTPRTO14522 1441 aa17.73■□□□□ 0.43
ITGB5-203ENST00000461306 CASKIN1Q8WXD9 1431 aa17.73■□□□□ 0.43
ITGB5-203ENST00000461306 ABCC1P33527 1531 aa17.73■□□□□ 0.43
ITGB5-203ENST00000461306 REREQ9P2R6 1566 aa17.73■□□□□ 0.43
ITGB5-203ENST00000461306 PREX2Q70Z35 1606 aa17.72■□□□□ 0.43
ITGB5-203ENST00000461306 AGLP35573 1532 aa17.72■□□□□ 0.43
ITGB5-203ENST00000461306 ITSN2Q9NZM3 1697 aa17.71■□□□□ 0.43
ITGB5-203ENST00000461306 KIDINS220Q9ULH0 1771 aa17.71■□□□□ 0.43
ITGB5-203ENST00000461306 SPAG9O60271 1321 aaKnown RBP17.71■□□□□ 0.42
ITGB5-203ENST00000461306 CCDC18Q5T9S5 1454 aa17.7■□□□□ 0.42
ITGB5-203ENST00000461306 LTBP4Q8N2S1 1624 aa17.7■□□□□ 0.42
ITGB5-203ENST00000461306 NCKAP5LQ9HCH0 1330 aa17.7■□□□□ 0.42
ITGB5-203ENST00000461306 ZMYM3Q14202 1370 aa17.68■□□□□ 0.42
ITGB5-203ENST00000461306 CDC42BPAQ5VT25 1732 aa17.68■□□□□ 0.42
ITGB5-203ENST00000461306 CNTLNQ9NXG0 1405 aa17.68■□□□□ 0.42
ITGB5-203ENST00000461306 GGT6Q6P531 493 aa17.67■□□□□ 0.42
ITGB5-203ENST00000461306 NCOA1Q15788 1441 aa17.66■□□□□ 0.42
ITGB5-203ENST00000461306 CFDP1Q9UEE9 299 aaPredicted RBP17.66■□□□□ 0.42
ITGB5-203ENST00000461306 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
ITGB5-203ENST00000461306 SUPT6HQ7KZ85 1726 aaKnown RBP17.65■□□□□ 0.42
ITGB5-203ENST00000461306 SYCP2Q9BX26 1530 aa17.64■□□□□ 0.41
ITGB5-203ENST00000461306 CAMSAP1Q5T5Y3 1602 aa17.64■□□□□ 0.41
ITGB5-203ENST00000461306 GPATCH8Q9UKJ3 1502 aaKnown RBP17.63■□□□□ 0.41
ITGB5-203ENST00000461306 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
ITGB5-203ENST00000461306 UBAP1LF5GYI3 381 aa17.61■□□□□ 0.41
ITGB5-203ENST00000461306 CCNB3Q8WWL7 1395 aa17.61■□□□□ 0.41
ITGB5-203ENST00000461306 IQSEC2Q5JU85 1478 aa17.61■□□□□ 0.41
ITGB5-203ENST00000461306 FYCO1Q9BQS8 1478 aa17.61■□□□□ 0.41
ITGB5-203ENST00000461306 NPATQ14207 1427 aa17.6■□□□□ 0.41
ITGB5-203ENST00000461306 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.41
ITGB5-203ENST00000461306 A2MP01023 1474 aa17.58■□□□□ 0.41
ITGB5-203ENST00000461306 ZNF644Q9H582 1327 aaPredicted RBP17.58■□□□□ 0.4
ITGB5-203ENST00000461306 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
ITGB5-203ENST00000461306 PKD2Q13563 968 aa17.57■□□□□ 0.4
ITGB5-203ENST00000461306 MROH2AA6NES4 1674 aa17.57■□□□□ 0.4
ITGB5-203ENST00000461306 MTUS2Q5JR59 1369 aa17.56■□□□□ 0.4
ITGB5-203ENST00000461306 KIAA1107Q9UPP5 1409 aa17.55■□□□□ 0.4
ITGB5-203ENST00000461306 PTPRKQ15262 1439 aa17.55■□□□□ 0.4
ITGB5-203ENST00000461306 PLEKHH2Q8IVE3 1493 aa17.54■□□□□ 0.4
ITGB5-203ENST00000461306 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
ITGB5-203ENST00000461306 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
ITGB5-203ENST00000461306 INO80Q9ULG1 1556 aaPredicted RBP17.51■□□□□ 0.39
ITGB5-203ENST00000461306 MYO3AQ8NEV4 1616 aa17.5■□□□□ 0.39
ITGB5-203ENST00000461306 FBXO31Q5XUX0 539 aaPredicted RBP17.5■□□□□ 0.39
ITGB5-203ENST00000461306 PLXNC1O60486 1568 aa17.49■□□□□ 0.39
ITGB5-203ENST00000461306 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
ITGB5-203ENST00000461306 KIF3BO15066 747 aa17.49■□□□□ 0.39
ITGB5-203ENST00000461306 PIP4K2BP78356 416 aa17.48■□□□□ 0.39
ITGB5-203ENST00000461306 PLA2R1Q13018 1463 aa17.48■□□□□ 0.39
ITGB5-203ENST00000461306 TCOF1Q13428 1488 aaKnown RBP17.47■□□□□ 0.39
ITGB5-203ENST00000461306 ZNF142P52746 1687 aaPredicted RBP17.47■□□□□ 0.39
ITGB5-203ENST00000461306 DHX29Q7Z478 1369 aaKnown RBP17.46■□□□□ 0.39
ITGB5-203ENST00000461306 ADGBQ8N7X0 1667 aa17.45■□□□□ 0.38
ITGB5-203ENST00000461306 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
ITGB5-203ENST00000461306 MBD5Q9P267 1494 aa17.44■□□□□ 0.38
ITGB5-203ENST00000461306 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
ITGB5-203ENST00000461306 TIAM1Q13009 1591 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms