RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 MAGI2Q86UL8 1455 aa26.15■■□□□ 1.78
YIPF3-206ENST00000460903 SPATA31D1Q6ZQQ2 1576 aa26.14■■□□□ 1.78
YIPF3-206ENST00000460903 MLECQ14165 292 aa26.12■■□□□ 1.77
YIPF3-206ENST00000460903 SETD1BQ9UPS6 1966 aaKnown RBP26.12■■□□□ 1.77
YIPF3-206ENST00000460903 MYO5CQ9NQX4 1742 aa26.06■■□□□ 1.76
YIPF3-206ENST00000460903 PLEKHD1A6NEE1 506 aa26.06■■□□□ 1.76
YIPF3-206ENST00000460903 ATP10AO60312 1499 aa26.01■■□□□ 1.75
YIPF3-206ENST00000460903 C3P01024 1663 aa26.01■■□□□ 1.75
YIPF3-206ENST00000460903 SCAPERQ9BY12 1400 aa26.01■■□□□ 1.75
YIPF3-206ENST00000460903 CDK13Q14004 1512 aaKnown RBP26■■□□□ 1.75
YIPF3-206ENST00000460903 C9orf84Q5VXU9 1444 aa26■■□□□ 1.75
YIPF3-206ENST00000460903 CEBPAP49715 358 aaPredicted RBP26■■□□□ 1.75
YIPF3-206ENST00000460903 PLCH2O75038 1416 aa25.96■■□□□ 1.75
YIPF3-206ENST00000460903 RANGAP1P46060 587 aaPredicted RBP25.95■■□□□ 1.74
YIPF3-206ENST00000460903 LTBP4Q8N2S1 1624 aa25.94■■□□□ 1.74
YIPF3-206ENST00000460903 UHRF1BP1Q6BDS2 1440 aa25.94■■□□□ 1.74
YIPF3-206ENST00000460903 DMRT2Q9Y5R5 561 aa25.93■■□□□ 1.74
YIPF3-206ENST00000460903 CSRNP3Q8WYN3 585 aa25.92■■□□□ 1.74
YIPF3-206ENST00000460903 KDM5CP41229 1560 aa25.9■■□□□ 1.74
YIPF3-206ENST00000460903 DIP2CQ9Y2E4 1556 aa25.9■■□□□ 1.74
YIPF3-206ENST00000460903 PTPRTO14522 1441 aa25.89■■□□□ 1.74
YIPF3-206ENST00000460903 KIF14Q15058 1648 aa25.89■■□□□ 1.74
YIPF3-206ENST00000460903 ABCA6Q8N139 1617 aa25.87■■□□□ 1.73
YIPF3-206ENST00000460903 REREQ9P2R6 1566 aa25.86■■□□□ 1.73
YIPF3-206ENST00000460903 CDC42BPBQ9Y5S2 1711 aa25.84■■□□□ 1.73
YIPF3-206ENST00000460903 IQSEC2Q5JU85 1478 aa25.84■■□□□ 1.73
YIPF3-206ENST00000460903 ZNF518AQ6AHZ1 1483 aa25.84■■□□□ 1.73
YIPF3-206ENST00000460903 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.73
YIPF3-206ENST00000460903 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
YIPF3-206ENST00000460903 ARHGAP5Q13017 1502 aa25.76■■□□□ 1.71
YIPF3-206ENST00000460903 NCOA1Q15788 1441 aa25.75■■□□□ 1.71
YIPF3-206ENST00000460903 ITSN2Q9NZM3 1697 aa25.74■■□□□ 1.71
YIPF3-206ENST00000460903 AFAP1Q8N556 730 aa25.74■■□□□ 1.71
YIPF3-206ENST00000460903 SUPT6HQ7KZ85 1726 aaKnown RBP25.74■■□□□ 1.71
YIPF3-206ENST00000460903 KIDINS220Q9ULH0 1771 aa25.73■■□□□ 1.71
YIPF3-206ENST00000460903 AGLP35573 1532 aa25.73■■□□□ 1.71
YIPF3-206ENST00000460903 MROH2AA6NES4 1674 aa25.71■■□□□ 1.71
YIPF3-206ENST00000460903 CAMSAP1Q5T5Y3 1602 aa25.71■■□□□ 1.71
YIPF3-206ENST00000460903 TRAPPC8Q9Y2L5 1435 aa25.71■■□□□ 1.71
YIPF3-206ENST00000460903 MLH3Q9UHC1 1453 aa25.7■■□□□ 1.7
YIPF3-206ENST00000460903 EEA1Q15075 1411 aa25.7■■□□□ 1.7
YIPF3-206ENST00000460903 PREX2Q70Z35 1606 aa25.69■■□□□ 1.7
YIPF3-206ENST00000460903 ABCC1P33527 1531 aa25.66■■□□□ 1.7
YIPF3-206ENST00000460903 ZNF142P52746 1687 aaPredicted RBP25.64■■□□□ 1.7
YIPF3-206ENST00000460903 TROQ12816 1431 aaPredicted RBP25.64■■□□□ 1.7
YIPF3-206ENST00000460903 CDC42BPAQ5VT25 1732 aa25.63■■□□□ 1.69
YIPF3-206ENST00000460903 MYT1LQ9UL68 1186 aa25.63■■□□□ 1.69
YIPF3-206ENST00000460903 MYO3AQ8NEV4 1616 aa25.61■■□□□ 1.69
YIPF3-206ENST00000460903 FMN1Q68DA7 1419 aa25.61■■□□□ 1.69
YIPF3-206ENST00000460903 CLTCQ00610 1675 aaKnown RBP25.59■■□□□ 1.69
YIPF3-206ENST00000460903 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
YIPF3-206ENST00000460903 CNTLNQ9NXG0 1405 aa25.59■■□□□ 1.69
YIPF3-206ENST00000460903 ESF1Q9H501 851 aaKnown RBP25.57■■□□□ 1.68
YIPF3-206ENST00000460903 ARHGAP35Q9NRY4 1499 aa25.57■■□□□ 1.68
YIPF3-206ENST00000460903 ZNF335Q9H4Z2 1342 aaPredicted RBP25.57■■□□□ 1.68
YIPF3-206ENST00000460903 CDK11AQ9UQ88 783 aaPredicted RBP25.56■■□□□ 1.68
YIPF3-206ENST00000460903 CLIP1P30622 1438 aa25.55■■□□□ 1.68
YIPF3-206ENST00000460903 NPATQ14207 1427 aa25.55■■□□□ 1.68
YIPF3-206ENST00000460903 UBAP1LF5GYI3 381 aa25.53■■□□□ 1.68
YIPF3-206ENST00000460903 MED1Q15648 1581 aaPredicted RBP25.52■■□□□ 1.68
YIPF3-206ENST00000460903 NCKAP5LQ9HCH0 1330 aa25.52■■□□□ 1.68
YIPF3-206ENST00000460903 SAMD9LQ8IVG5 1584 aa25.51■■□□□ 1.67
YIPF3-206ENST00000460903 CEP170BQ9Y4F5 1589 aaPredicted RBP25.51■■□□□ 1.67
YIPF3-206ENST00000460903 PLA2R1Q13018 1463 aa25.48■■□□□ 1.67
YIPF3-206ENST00000460903 TCOF1Q13428 1488 aaKnown RBP25.48■■□□□ 1.67
YIPF3-206ENST00000460903 ZMYM3Q14202 1370 aa25.47■■□□□ 1.67
YIPF3-206ENST00000460903 POLR1AO95602 1720 aaPredicted RBP25.47■■□□□ 1.67
YIPF3-206ENST00000460903 PLXNC1O60486 1568 aa25.44■■□□□ 1.66
YIPF3-206ENST00000460903 SYCP2Q9BX26 1530 aa25.41■■□□□ 1.66
YIPF3-206ENST00000460903 INO80Q9ULG1 1556 aaPredicted RBP25.4■■□□□ 1.66
YIPF3-206ENST00000460903 PTPRKQ15262 1439 aa25.39■■□□□ 1.66
YIPF3-206ENST00000460903 ATP7AQ04656 1500 aa25.38■■□□□ 1.65
YIPF3-206ENST00000460903 DNMT1P26358 1616 aaKnown RBP25.38■■□□□ 1.65
YIPF3-206ENST00000460903 PKD2Q13563 968 aa25.38■■□□□ 1.65
YIPF3-206ENST00000460903 EHMT2Q96KQ7 1210 aa25.37■■□□□ 1.65
YIPF3-206ENST00000460903 HSPA1LP34931 641 aa25.35■■□□□ 1.65
YIPF3-206ENST00000460903 NEURL4Q96JN8 1562 aa25.35■■□□□ 1.65
YIPF3-206ENST00000460903 CCDC18Q5T9S5 1454 aa25.34■■□□□ 1.65
YIPF3-206ENST00000460903 ADGBQ8N7X0 1667 aa25.34■■□□□ 1.65
YIPF3-206ENST00000460903 UBTFP17480 764 aaKnown RBP25.34■■□□□ 1.65
YIPF3-206ENST00000460903 PPP6R1Q9UPN7 881 aa25.31■■□□□ 1.64
YIPF3-206ENST00000460903 ALKQ9UM73 1620 aa25.3■■□□□ 1.64
YIPF3-206ENST00000460903 A2MP01023 1474 aa25.29■■□□□ 1.64
YIPF3-206ENST00000460903 CPS1P31327 1500 aa25.29■■□□□ 1.64
YIPF3-206ENST00000460903 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
YIPF3-206ENST00000460903 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
YIPF3-206ENST00000460903 CASKIN1Q8WXD9 1431 aa25.28■■□□□ 1.64
YIPF3-206ENST00000460903 A2ML1A8K2U0 1454 aa25.28■■□□□ 1.64
YIPF3-206ENST00000460903 PIP4K2BP78356 416 aa25.27■■□□□ 1.64
YIPF3-206ENST00000460903 GPATCH8Q9UKJ3 1502 aaKnown RBP25.27■■□□□ 1.64
YIPF3-206ENST00000460903 ZNF777Q9ULD5 760 aaPredicted RBP25.25■■□□□ 1.63
YIPF3-206ENST00000460903 HNRNPMP52272 730 aaKnown RBP eCLIP25.24■■□□□ 1.63
YIPF3-206ENST00000460903 SHANK2Q9UPX8 1470 aa25.23■■□□□ 1.63
YIPF3-206ENST00000460903 VWDEQ8N2E2 1590 aa25.22■■□□□ 1.63
YIPF3-206ENST00000460903 STRCP1A6NGW2 1772 aa25.22■■□□□ 1.63
YIPF3-206ENST00000460903 GGT6Q6P531 493 aa25.21■■□□□ 1.63
YIPF3-206ENST00000460903 TOM1O60784 492 aa25.19■■□□□ 1.62
YIPF3-206ENST00000460903 KIAA1107Q9UPP5 1409 aa25.19■■□□□ 1.62
YIPF3-206ENST00000460903 FYCO1Q9BQS8 1478 aa25.16■■□□□ 1.62
YIPF3-206ENST00000460903 PLEKHH2Q8IVE3 1493 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms