RNA–Protein interactions for RNA: ENST00000460837.2

PTCD2-203, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-203ENST00000460837 WIZO95785 1651 aa13.11□□□□□ -0.31
PTCD2-203ENST00000460837 ATAD2BQ9ULI0 1458 aa13.1□□□□□ -0.31
PTCD2-203ENST00000460837 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
PTCD2-203ENST00000460837 EMP3P54852 163 aa13.08□□□□□ -0.32
PTCD2-203ENST00000460837 NCAPD3P42695 1498 aa13.07□□□□□ -0.32
PTCD2-203ENST00000460837 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.06□□□□□ -0.32
PTCD2-203ENST00000460837 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
PTCD2-203ENST00000460837 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
PTCD2-203ENST00000460837 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
PTCD2-203ENST00000460837 SOX12O15370 315 aa13.02□□□□□ -0.33
PTCD2-203ENST00000460837 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
PTCD2-203ENST00000460837 BAZ1BQ9UIG0 1483 aaKnown RBP13□□□□□ -0.33
PTCD2-203ENST00000460837 TOP2AP11388 1531 aaKnown RBP12.99□□□□□ -0.33
PTCD2-203ENST00000460837 HOXB3P14651 431 aaPredicted RBP12.99□□□□□ -0.33
PTCD2-203ENST00000460837 HS3ST6Q96QI5 342 aa12.98□□□□□ -0.33
PTCD2-203ENST00000460837 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
PTCD2-203ENST00000460837 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
PTCD2-203ENST00000460837 SPNS2Q8IVW8 549 aa12.97□□□□□ -0.33
PTCD2-203ENST00000460837 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
PTCD2-203ENST00000460837 ZNF710Q8N1W2 664 aa12.97□□□□□ -0.33
PTCD2-203ENST00000460837 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
PTCD2-203ENST00000460837 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
PTCD2-203ENST00000460837 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
PTCD2-203ENST00000460837 MMRN1Q13201 1228 aa12.93□□□□□ -0.34
PTCD2-203ENST00000460837 SUPT5HO00267 1087 aaKnown RBP12.92□□□□□ -0.34
PTCD2-203ENST00000460837 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
PTCD2-203ENST00000460837 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
PTCD2-203ENST00000460837 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
PTCD2-203ENST00000460837 HOXB1P14653 301 aaPredicted RBP12.9□□□□□ -0.34
PTCD2-203ENST00000460837 STK24Q9Y6E0 443 aa12.89□□□□□ -0.35
PTCD2-203ENST00000460837 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
PTCD2-203ENST00000460837 ECM2O94769 699 aaPredicted RBP12.87□□□□□ -0.35
PTCD2-203ENST00000460837 NLRP6P59044 892 aa12.87□□□□□ -0.35
PTCD2-203ENST00000460837 KRTAP3-3Q9BYR6 98 aa12.87□□□□□ -0.35
PTCD2-203ENST00000460837 KRTAP3-2Q9BYR7 98 aa12.87□□□□□ -0.35
PTCD2-203ENST00000460837 ERBB3P21860 1342 aa12.86□□□□□ -0.35
PTCD2-203ENST00000460837 STK25O00506 426 aa12.83□□□□□ -0.36
PTCD2-203ENST00000460837 FBXO22Q8NEZ5 403 aa12.82□□□□□ -0.36
PTCD2-203ENST00000460837 CCDC88BA6NC98 1476 aa12.79□□□□□ -0.36
PTCD2-203ENST00000460837 MFRPQ9BY79 579 aa12.78□□□□□ -0.36
PTCD2-203ENST00000460837 PKD2Q13563 968 aa12.77□□□□□ -0.37
PTCD2-203ENST00000460837 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.37
PTCD2-203ENST00000460837 RGL2O15211 777 aa12.76□□□□□ -0.37
PTCD2-203ENST00000460837 VARS2Q5ST30 1063 aaKnown RBP12.76□□□□□ -0.37
PTCD2-203ENST00000460837 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
PTCD2-203ENST00000460837 GPR153Q6NV75 609 aa12.74□□□□□ -0.37
PTCD2-203ENST00000460837 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
PTCD2-203ENST00000460837 LAMC3Q9Y6N6 1575 aa12.72□□□□□ -0.37
PTCD2-203ENST00000460837 ARSIQ5FYB1 569 aa12.71□□□□□ -0.37
PTCD2-203ENST00000460837 CFTRP13569 1480 aa12.68□□□□□ -0.38
PTCD2-203ENST00000460837 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
PTCD2-203ENST00000460837 C2orf72A6NCS6 295 aa12.65□□□□□ -0.38
PTCD2-203ENST00000460837 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
PTCD2-203ENST00000460837 KHSRPQ92945 711 aaKnown RBP eCLIP12.65□□□□□ -0.38
PTCD2-203ENST00000460837 NESP48681 1621 aa12.62□□□□□ -0.39
PTCD2-203ENST00000460837 KIF3CO14782 793 aa12.62□□□□□ -0.39
PTCD2-203ENST00000460837 ZNF316A6NFI3 1004 aaPredicted RBP12.59□□□□□ -0.39
PTCD2-203ENST00000460837 KIF21AQ7Z4S6 1674 aa12.58□□□□□ -0.4
PTCD2-203ENST00000460837 PPP1R37O75864 691 aa12.58□□□□□ -0.4
PTCD2-203ENST00000460837 TMC2Q8TDI7 906 aa12.58□□□□□ -0.4
PTCD2-203ENST00000460837 PDS5BQ9NTI5 1447 aa12.56□□□□□ -0.4
PTCD2-203ENST00000460837 NUDT7P0C024 238 aa12.54□□□□□ -0.4
PTCD2-203ENST00000460837 HAP1P54257 671 aaPredicted RBP12.54□□□□□ -0.4
PTCD2-203ENST00000460837 RNF166Q96A37 237 aaPredicted RBP12.54□□□□□ -0.4
PTCD2-203ENST00000460837 MYT1LQ9UL68 1186 aa12.53□□□□□ -0.4
PTCD2-203ENST00000460837 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
PTCD2-203ENST00000460837 ANKRD13DQ6ZTN6 518 aa12.52□□□□□ -0.41
PTCD2-203ENST00000460837 PCDHGA4Q9Y5G9 962 aa12.51□□□□□ -0.41
PTCD2-203ENST00000460837 SLC34A2O95436 690 aa12.5□□□□□ -0.41
PTCD2-203ENST00000460837 CEP164Q9UPV0 1460 aa12.5□□□□□ -0.41
PTCD2-203ENST00000460837 LHX6Q9UPM6 363 aa12.48□□□□□ -0.41
PTCD2-203ENST00000460837 HS6ST3Q8IZP7 471 aa12.47□□□□□ -0.41
PTCD2-203ENST00000460837 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
PTCD2-203ENST00000460837 THOC2Q8NI27 1593 aaKnown RBP12.45□□□□□ -0.42
PTCD2-203ENST00000460837 CHGAP10645 457 aaKnown RBP12.44□□□□□ -0.42
PTCD2-203ENST00000460837 LSM11P83369 360 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTCD2-203ENST00000460837 PTGER2P43116 358 aa12.43□□□□□ -0.42
PTCD2-203ENST00000460837 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
PTCD2-203ENST00000460837 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
PTCD2-203ENST00000460837 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
PTCD2-203ENST00000460837 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
PTCD2-203ENST00000460837 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
PTCD2-203ENST00000460837 WDR62O43379 1518 aa12.41□□□□□ -0.42
PTCD2-203ENST00000460837 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
PTCD2-203ENST00000460837 PBX2P40425 430 aa12.39□□□□□ -0.43
PTCD2-203ENST00000460837 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
PTCD2-203ENST00000460837 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
PTCD2-203ENST00000460837 CUX1P39880 1505 aa12.38□□□□□ -0.43
PTCD2-203ENST00000460837 POTEEQ6S8J3 1075 aa12.38□□□□□ -0.43
PTCD2-203ENST00000460837 PLPP6Q8IY26 295 aa12.38□□□□□ -0.43
PTCD2-203ENST00000460837 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
PTCD2-203ENST00000460837 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
PTCD2-203ENST00000460837 FOXK1P85037 733 aa12.37□□□□□ -0.43
PTCD2-203ENST00000460837 GPHNQ9NQX3 736 aaPredicted RBP12.37□□□□□ -0.43
PTCD2-203ENST00000460837 PTCD2Q8WV60 388 aaKnown RBP12.36□□□□□ -0.43
PTCD2-203ENST00000460837 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
PTCD2-203ENST00000460837 DSG2Q14126 1118 aa12.33□□□□□ -0.44
PTCD2-203ENST00000460837 KDM4FA0A1W2PPD8 638 aa12.32□□□□□ -0.44
PTCD2-203ENST00000460837 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
PTCD2-203ENST00000460837 NKX1-1Q15270 411 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms