RNA–Protein interactions for RNA: ENST00000460659.5

RERE-205, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-205ENST00000460659 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
RERE-205ENST00000460659 FAM9AQ8IZU1 332 aaPredicted RBP17.69■□□□□ 0.42
RERE-205ENST00000460659 CEBPAP49715 358 aaPredicted RBP17.65■□□□□ 0.42
RERE-205ENST00000460659 ARHGEF12Q9NZN5 1544 aa17.64■□□□□ 0.41
RERE-205ENST00000460659 CDK13Q14004 1512 aaKnown RBP17.6■□□□□ 0.41
RERE-205ENST00000460659 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
RERE-205ENST00000460659 PLEKHD1A6NEE1 506 aa17.59■□□□□ 0.41
RERE-205ENST00000460659 SCAPERQ9BY12 1400 aa17.58■□□□□ 0.41
RERE-205ENST00000460659 C9orf84Q5VXU9 1444 aa17.56■□□□□ 0.4
RERE-205ENST00000460659 MYO5CQ9NQX4 1742 aa17.56■□□□□ 0.4
RERE-205ENST00000460659 ATP10AO60312 1499 aa17.56■□□□□ 0.4
RERE-205ENST00000460659 C3P01024 1663 aa17.55■□□□□ 0.4
RERE-205ENST00000460659 UHRF1BP1Q6BDS2 1440 aa17.55■□□□□ 0.4
RERE-205ENST00000460659 LTBP4Q8N2S1 1624 aa17.53■□□□□ 0.4
RERE-205ENST00000460659 KIF14Q15058 1648 aa17.5■□□□□ 0.39
RERE-205ENST00000460659 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
RERE-205ENST00000460659 PLCH2O75038 1416 aa17.49■□□□□ 0.39
RERE-205ENST00000460659 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
RERE-205ENST00000460659 ABCA6Q8N139 1617 aa17.48■□□□□ 0.39
RERE-205ENST00000460659 SETD1BQ9UPS6 1966 aaKnown RBP17.48■□□□□ 0.39
RERE-205ENST00000460659 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
RERE-205ENST00000460659 PTPRTO14522 1441 aa17.47■□□□□ 0.39
RERE-205ENST00000460659 KDM5CP41229 1560 aa17.45■□□□□ 0.38
RERE-205ENST00000460659 MYT1LQ9UL68 1186 aa17.43■□□□□ 0.38
RERE-205ENST00000460659 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
RERE-205ENST00000460659 AFAP1Q8N556 730 aa17.42■□□□□ 0.38
RERE-205ENST00000460659 ZNF518AQ6AHZ1 1483 aa17.42■□□□□ 0.38
RERE-205ENST00000460659 ATP1B4Q9UN42 357 aaPredicted RBP17.41■□□□□ 0.38
RERE-205ENST00000460659 LRRIQ1Q96JM4 1722 aa17.41■□□□□ 0.38
RERE-205ENST00000460659 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
RERE-205ENST00000460659 CAMSAP1Q5T5Y3 1602 aa17.39■□□□□ 0.38
RERE-205ENST00000460659 IQSEC2Q5JU85 1478 aa17.39■□□□□ 0.37
RERE-205ENST00000460659 CDC42BPBQ9Y5S2 1711 aa17.39■□□□□ 0.37
RERE-205ENST00000460659 EFCAB2Q5VUJ9 269 aa17.39■□□□□ 0.37
RERE-205ENST00000460659 REREQ9P2R6 1566 aa17.39■□□□□ 0.37
RERE-205ENST00000460659 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
RERE-205ENST00000460659 SUPT6HQ7KZ85 1726 aaKnown RBP17.36■□□□□ 0.37
RERE-205ENST00000460659 ZNF335Q9H4Z2 1342 aaPredicted RBP17.35■□□□□ 0.37
RERE-205ENST00000460659 UBAP1LF5GYI3 381 aa17.34■□□□□ 0.37
RERE-205ENST00000460659 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
RERE-205ENST00000460659 TRAPPC8Q9Y2L5 1435 aa17.34■□□□□ 0.37
RERE-205ENST00000460659 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.37
RERE-205ENST00000460659 NCKAP5LQ9HCH0 1330 aa17.33■□□□□ 0.36
RERE-205ENST00000460659 ESF1Q9H501 851 aaKnown RBP17.32■□□□□ 0.36
RERE-205ENST00000460659 PREX2Q70Z35 1606 aa17.32■□□□□ 0.36
RERE-205ENST00000460659 AGLP35573 1532 aa17.31■□□□□ 0.36
RERE-205ENST00000460659 MYO3AQ8NEV4 1616 aa17.31■□□□□ 0.36
RERE-205ENST00000460659 ABCC1P33527 1531 aa17.31■□□□□ 0.36
RERE-205ENST00000460659 MROH2AA6NES4 1674 aa17.3■□□□□ 0.36
RERE-205ENST00000460659 CLTCQ00610 1675 aaKnown RBP17.3■□□□□ 0.36
RERE-205ENST00000460659 MED1Q15648 1581 aaPredicted RBP17.3■□□□□ 0.36
RERE-205ENST00000460659 MLH3Q9UHC1 1453 aa17.3■□□□□ 0.36
RERE-205ENST00000460659 TROQ12816 1431 aaPredicted RBP17.29■□□□□ 0.36
RERE-205ENST00000460659 ZNF142P52746 1687 aaPredicted RBP17.28■□□□□ 0.36
RERE-205ENST00000460659 CDC42BPAQ5VT25 1732 aa17.26■□□□□ 0.35
RERE-205ENST00000460659 ARHGAP35Q9NRY4 1499 aa17.24■□□□□ 0.35
RERE-205ENST00000460659 CLIP1P30622 1438 aa17.24■□□□□ 0.35
RERE-205ENST00000460659 EEA1Q15075 1411 aa17.24■□□□□ 0.35
RERE-205ENST00000460659 CNTLNQ9NXG0 1405 aa17.24■□□□□ 0.35
RERE-205ENST00000460659 SCAF1Q9H7N4 1312 aaKnown RBP17.23■□□□□ 0.35
RERE-205ENST00000460659 FMN1Q68DA7 1419 aa17.23■□□□□ 0.35
RERE-205ENST00000460659 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
RERE-205ENST00000460659 CDK11AQ9UQ88 783 aaPredicted RBP17.22■□□□□ 0.35
RERE-205ENST00000460659 NPATQ14207 1427 aa17.21■□□□□ 0.35
RERE-205ENST00000460659 SAMD9LQ8IVG5 1584 aa17.21■□□□□ 0.35
RERE-205ENST00000460659 HSPA1LP34931 641 aa17.21■□□□□ 0.35
RERE-205ENST00000460659 ZMYM3Q14202 1370 aa17.2■□□□□ 0.34
RERE-205ENST00000460659 PIP4K2BP78356 416 aa17.2■□□□□ 0.34
RERE-205ENST00000460659 TCOF1Q13428 1488 aaKnown RBP17.18■□□□□ 0.34
RERE-205ENST00000460659 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
RERE-205ENST00000460659 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
RERE-205ENST00000460659 PLA2R1Q13018 1463 aa17.17■□□□□ 0.34
RERE-205ENST00000460659 PTPRKQ15262 1439 aa17.14■□□□□ 0.33
RERE-205ENST00000460659 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
RERE-205ENST00000460659 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
RERE-205ENST00000460659 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
RERE-205ENST00000460659 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
RERE-205ENST00000460659 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
RERE-205ENST00000460659 ATP7AQ04656 1500 aa17.13■□□□□ 0.33
RERE-205ENST00000460659 NEURL4Q96JN8 1562 aa17.13■□□□□ 0.33
RERE-205ENST00000460659 DNMT1P26358 1616 aaKnown RBP17.13■□□□□ 0.33
RERE-205ENST00000460659 INO80Q9ULG1 1556 aaPredicted RBP17.12■□□□□ 0.33
RERE-205ENST00000460659 PKD2Q13563 968 aa17.11■□□□□ 0.33
RERE-205ENST00000460659 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
RERE-205ENST00000460659 HNRNPMP52272 730 aaKnown RBP eCLIP17.09■□□□□ 0.338e-7■■■■□ 20.1
RERE-205ENST00000460659 GGT6Q6P531 493 aa17.09■□□□□ 0.33
RERE-205ENST00000460659 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
RERE-205ENST00000460659 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
RERE-205ENST00000460659 A2MP01023 1474 aa17.08■□□□□ 0.32
RERE-205ENST00000460659 CPS1P31327 1500 aa17.06■□□□□ 0.32
RERE-205ENST00000460659 A2ML1A8K2U0 1454 aa17.06■□□□□ 0.32
RERE-205ENST00000460659 ADGBQ8N7X0 1667 aa17.06■□□□□ 0.32
RERE-205ENST00000460659 CCDC18Q5T9S5 1454 aa17.05■□□□□ 0.32
RERE-205ENST00000460659 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
RERE-205ENST00000460659 VWDEQ8N2E2 1590 aa17.05■□□□□ 0.32
RERE-205ENST00000460659 TOM1O60784 492 aa17.04■□□□□ 0.32
RERE-205ENST00000460659 STRCP1A6NGW2 1772 aa17.04■□□□□ 0.32
RERE-205ENST00000460659 GPATCH8Q9UKJ3 1502 aaKnown RBP17.03■□□□□ 0.32
RERE-205ENST00000460659 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.31
RERE-205ENST00000460659 FBXO31Q5XUX0 539 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms