RNA–Protein interactions for RNA: ENST00000459850.5

ABCA2-208, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,073 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-208ENST00000459850 RASSF8Q8NHQ8 419 aa15.36■□□□□ 0.05
ABCA2-208ENST00000459850 RTN4Q9NQC3 1192 aaKnown RBP15.36■□□□□ 0.05
ABCA2-208ENST00000459850 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
ABCA2-208ENST00000459850 KIF27Q86VH2 1401 aa15.34■□□□□ 0.05
ABCA2-208ENST00000459850 RGS3P49796 1198 aa15.34■□□□□ 0.05
ABCA2-208ENST00000459850 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.04
ABCA2-208ENST00000459850 CHMP3Q9Y3E7 222 aa15.33■□□□□ 0.04
ABCA2-208ENST00000459850 HSCBQ8IWL3 235 aa15.33■□□□□ 0.04
ABCA2-208ENST00000459850 RTF1Q92541 710 aaKnown RBP15.33■□□□□ 0.04
ABCA2-208ENST00000459850 HSP90B1P14625 803 aaKnown RBP15.33■□□□□ 0.04
ABCA2-208ENST00000459850 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
ABCA2-208ENST00000459850 TAF7LQ5H9L4 462 aa15.32■□□□□ 0.04
ABCA2-208ENST00000459850 GORABQ5T7V8 394 aa15.31■□□□□ 0.04
ABCA2-208ENST00000459850 TCEAL9Q9UHQ7 104 aa15.31■□□□□ 0.04
ABCA2-208ENST00000459850 TNNT3P45378 269 aaPredicted RBP15.31■□□□□ 0.04
ABCA2-208ENST00000459850 CSB-PGBD3P0DP91 1061 aa15.31■□□□□ 0.04
ABCA2-208ENST00000459850 TPM4P67936 248 aa15.31■□□□□ 0.04
ABCA2-208ENST00000459850 WRNQ14191 1432 aaPredicted RBP eCLIP15.3■□□□□ 0.04
ABCA2-208ENST00000459850 MARCH6O60337 910 aa15.3■□□□□ 0.04
ABCA2-208ENST00000459850 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
ABCA2-208ENST00000459850 EIF4G1Q04637 1599 aaKnown RBP15.29■□□□□ 0.04
ABCA2-208ENST00000459850 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
ABCA2-208ENST00000459850 ARID3AQ99856 593 aa15.29■□□□□ 0.04
ABCA2-208ENST00000459850 MLECQ14165 292 aa15.28■□□□□ 0.04
ABCA2-208ENST00000459850 KANK1Q14678 1352 aa15.28■□□□□ 0.04
ABCA2-208ENST00000459850 CC2D1BQ5T0F9 858 aaKnown RBP15.27■□□□□ 0.04
ABCA2-208ENST00000459850 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.03
ABCA2-208ENST00000459850 MS4A1P11836 297 aa15.27■□□□□ 0.03
ABCA2-208ENST00000459850 CWC22Q9HCG8 908 aaKnown RBP15.26■□□□□ 0.03
ABCA2-208ENST00000459850 SUPT16HQ9Y5B9 1047 aaKnown RBP15.26■□□□□ 0.03
ABCA2-208ENST00000459850 APBB1O00213 710 aa15.26■□□□□ 0.03
ABCA2-208ENST00000459850 CCDC34Q96HJ3 373 aa15.26■□□□□ 0.03
ABCA2-208ENST00000459850 PATL2C9JE40 543 aaKnown RBP15.24■□□□□ 0.03
ABCA2-208ENST00000459850 PES1O00541 588 aaKnown RBP15.24■□□□□ 0.03
ABCA2-208ENST00000459850 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
ABCA2-208ENST00000459850 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
ABCA2-208ENST00000459850 USP35Q9P2H5 1018 aa15.23■□□□□ 0.03
ABCA2-208ENST00000459850 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
ABCA2-208ENST00000459850 CTDP1Q9Y5B0 961 aaPredicted RBP15.23■□□□□ 0.03
ABCA2-208ENST00000459850 HDGFP51858 240 aaKnown RBP15.22■□□□□ 0.03
ABCA2-208ENST00000459850 HTATSF1O43719 755 aaKnown RBP15.22■□□□□ 0.03
ABCA2-208ENST00000459850 MSH5O43196 834 aa15.22■□□□□ 0.03
ABCA2-208ENST00000459850 SRPK2P78362 688 aaKnown RBP15.21■□□□□ 0.03
ABCA2-208ENST00000459850 GTF2E1P29083 439 aaPredicted RBP15.21■□□□□ 0.03
ABCA2-208ENST00000459850 TMF1P82094 1093 aa15.2■□□□□ 0.02
ABCA2-208ENST00000459850 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
ABCA2-208ENST00000459850 TRIM34Q9BYJ4 488 aa15.2■□□□□ 0.02
ABCA2-208ENST00000459850 RAD21O60216 631 aa15.19■□□□□ 0.02
ABCA2-208ENST00000459850 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
ABCA2-208ENST00000459850 SETQ01105 290 aaPredicted RBP15.18■□□□□ 0.02
ABCA2-208ENST00000459850 TNIKQ9UKE5 1360 aa15.18■□□□□ 0.02
ABCA2-208ENST00000459850 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■■■■■ 151.5
ABCA2-208ENST00000459850 PPP4R2Q9NY27 417 aa15.17■□□□□ 0.02
ABCA2-208ENST00000459850 TPM3P06753 285 aa15.17■□□□□ 0.02
ABCA2-208ENST00000459850 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
ABCA2-208ENST00000459850 FHAD1B1AJZ9 1412 aa15.17■□□□□ 0.02
ABCA2-208ENST00000459850 CALRP27797 417 aaKnown RBP15.16■□□□□ 0.02
ABCA2-208ENST00000459850 TPD52L1Q16890 204 aaPredicted RBP15.16■□□□□ 0.02
ABCA2-208ENST00000459850 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
ABCA2-208ENST00000459850 SAFB2Q14151 953 aaKnown RBP eCLIP15.16■□□□□ 0.02
ABCA2-208ENST00000459850 TOMM22Q9NS69 142 aa15.16■□□□□ 0.02
ABCA2-208ENST00000459850 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
ABCA2-208ENST00000459850 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
ABCA2-208ENST00000459850 SIN3AQ96ST3 1273 aa15.14■□□□□ 0.01
ABCA2-208ENST00000459850 TSR1Q2NL82 804 aaKnown RBP15.13■□□□□ 0.01
ABCA2-208ENST00000459850 AEBP2Q6ZN18 517 aaPredicted RBP15.12■□□□□ 0.01
ABCA2-208ENST00000459850 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
ABCA2-208ENST00000459850 MEX3CQ5U5Q3 659 aaKnown RBP15.11■□□□□ 0.01
ABCA2-208ENST00000459850 TRIM6-TRIM34B2RNG4 842 aa15.11■□□□□ 0.01
ABCA2-208ENST00000459850 SYAP1Q96A49 352 aaPredicted RBP15.11■□□□□ 0.01
ABCA2-208ENST00000459850 RRP12Q5JTH9 1297 aaKnown RBP15.1■□□□□ 0.01
ABCA2-208ENST00000459850 TPM2P07951 284 aa15.1■□□□□ 0.01
ABCA2-208ENST00000459850 NOP58Q9Y2X3 529 aaKnown RBP15.09■□□□□ 0.01
ABCA2-208ENST00000459850 STK26Q9P289 416 aa15.08■□□□□ 0.01
ABCA2-208ENST00000459850 FBXW7Q969H0 707 aa15.07■□□□□ 0
ABCA2-208ENST00000459850 ARHGAP35Q9NRY4 1499 aa15.07■□□□□ 0
ABCA2-208ENST00000459850 SMARCA2P51531 1590 aa15.07■□□□□ 0
ABCA2-208ENST00000459850 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.07■□□□□ 0
ABCA2-208ENST00000459850 HDGFL2Q7Z4V5 671 aaPredicted RBP15.06■□□□□ 0
ABCA2-208ENST00000459850 SPAG9O60271 1321 aaKnown RBP15.06■□□□□ 0
ABCA2-208ENST00000459850 NOL10Q9BSC4 688 aaKnown RBP15.05■□□□□ 0
ABCA2-208ENST00000459850 CSPP1Q1MSJ5 1256 aa15.05■□□□□ -0
ABCA2-208ENST00000459850 CUX2O14529 1486 aa15.05■□□□□ -0
ABCA2-208ENST00000459850 B4GALNT3Q6L9W6 998 aa15.04■□□□□ -0
ABCA2-208ENST00000459850 AMOTL1Q8IY63 956 aa15.04■□□□□ -0
ABCA2-208ENST00000459850 GBP4Q96PP9 640 aa15.04■□□□□ -0
ABCA2-208ENST00000459850 CCDC43Q96MW1 224 aaKnown RBP15.04■□□□□ -0
ABCA2-208ENST00000459850 GZF1Q9H116 711 aaPredicted RBP15.04■□□□□ -0
ABCA2-208ENST00000459850 PTMSP20962 102 aa15.04■□□□□ -0
ABCA2-208ENST00000459850 SF3A1Q15459 793 aaKnown RBP15.04■□□□□ -0
ABCA2-208ENST00000459850 PAF1Q8N7H5 531 aa15.04■□□□□ -0
ABCA2-208ENST00000459850 AKAP17AQ02040 695 aaKnown RBP15.04■□□□□ -0
ABCA2-208ENST00000459850 CCAR2Q8N163 923 aaKnown RBP15.04■□□□□ -0
ABCA2-208ENST00000459850 CCDC70Q6NSX1 233 aa15.03■□□□□ -0
ABCA2-208ENST00000459850 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
ABCA2-208ENST00000459850 ODF2Q5BJF6 829 aa15.02■□□□□ -0
ABCA2-208ENST00000459850 KTN1Q86UP2 1357 aaKnown RBP15.02■□□□□ -0
ABCA2-208ENST00000459850 SAMD1Q6SPF0 538 aaPredicted RBP15.02□□□□□ -0.01
ABCA2-208ENST00000459850 PCMTD1Q96MG8 357 aaPredicted RBP15.02□□□□□ -0.01
ABCA2-208ENST00000459850 EVA1CP58658 441 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms