RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 ARHGEF12Q9NZN5 1544 aa15.82■□□□□ 0.12
SCNM1-203ENST00000459799 SAMD9Q5K651 1589 aa15.81■□□□□ 0.12
SCNM1-203ENST00000459799 HECW1Q76N89 1606 aa15.79■□□□□ 0.12
SCNM1-203ENST00000459799 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
SCNM1-203ENST00000459799 PRXQ9BXM0 1461 aa15.78■□□□□ 0.12
SCNM1-203ENST00000459799 MAGI2Q86UL8 1455 aa15.77■□□□□ 0.11
SCNM1-203ENST00000459799 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.76■□□□□ 0.11
SCNM1-203ENST00000459799 LTBP4Q8N2S1 1624 aa15.76■□□□□ 0.11
SCNM1-203ENST00000459799 IQSEC2Q5JU85 1478 aa15.72■□□□□ 0.11
SCNM1-203ENST00000459799 MLECQ14165 292 aa15.72■□□□□ 0.11
SCNM1-203ENST00000459799 P3H3Q8IVL6 736 aa15.72■□□□□ 0.11
SCNM1-203ENST00000459799 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
SCNM1-203ENST00000459799 PTPRTO14522 1441 aa15.7■□□□□ 0.1
SCNM1-203ENST00000459799 UHRF1BP1Q6BDS2 1440 aa15.7■□□□□ 0.1
SCNM1-203ENST00000459799 C9orf84Q5VXU9 1444 aa15.68■□□□□ 0.1
SCNM1-203ENST00000459799 SETD1BQ9UPS6 1966 aaKnown RBP15.68■□□□□ 0.1
SCNM1-203ENST00000459799 CEBPAP49715 358 aaPredicted RBP15.67■□□□□ 0.1
SCNM1-203ENST00000459799 C3P01024 1663 aa15.67■□□□□ 0.1
SCNM1-203ENST00000459799 ATP10AO60312 1499 aa15.66■□□□□ 0.1
SCNM1-203ENST00000459799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.66■□□□□ 0.1
SCNM1-203ENST00000459799 HNRNPUL2Q1KMD3 747 aaKnown RBP15.66■□□□□ 0.1
SCNM1-203ENST00000459799 FAM9AQ8IZU1 332 aaPredicted RBP15.66■□□□□ 0.1
SCNM1-203ENST00000459799 SCAPERQ9BY12 1400 aa15.63■□□□□ 0.09
SCNM1-203ENST00000459799 KDM5CP41229 1560 aa15.61■□□□□ 0.09
SCNM1-203ENST00000459799 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
SCNM1-203ENST00000459799 MYO5CQ9NQX4 1742 aa15.6■□□□□ 0.09
SCNM1-203ENST00000459799 REREQ9P2R6 1566 aa15.6■□□□□ 0.09
SCNM1-203ENST00000459799 DIP2CQ9Y2E4 1556 aa15.6■□□□□ 0.09
SCNM1-203ENST00000459799 PLEKHD1A6NEE1 506 aa15.59■□□□□ 0.09
SCNM1-203ENST00000459799 PLCH2O75038 1416 aa15.59■□□□□ 0.09
SCNM1-203ENST00000459799 CDK13Q14004 1512 aaKnown RBP15.57■□□□□ 0.08
SCNM1-203ENST00000459799 MED1Q15648 1581 aaPredicted RBP15.57■□□□□ 0.08
SCNM1-203ENST00000459799 ABCA6Q8N139 1617 aa15.57■□□□□ 0.08
SCNM1-203ENST00000459799 ZNF518AQ6AHZ1 1483 aa15.55■□□□□ 0.08
SCNM1-203ENST00000459799 CAMSAP1Q5T5Y3 1602 aa15.54■□□□□ 0.08
SCNM1-203ENST00000459799 TRAPPC8Q9Y2L5 1435 aa15.52■□□□□ 0.08
SCNM1-203ENST00000459799 AGLP35573 1532 aa15.51■□□□□ 0.07
SCNM1-203ENST00000459799 KIF14Q15058 1648 aa15.5■□□□□ 0.07
SCNM1-203ENST00000459799 ZNF142P52746 1687 aaPredicted RBP15.5■□□□□ 0.07
SCNM1-203ENST00000459799 MROH2AA6NES4 1674 aa15.49■□□□□ 0.07
SCNM1-203ENST00000459799 ZNF335Q9H4Z2 1342 aaPredicted RBP15.48■□□□□ 0.07
SCNM1-203ENST00000459799 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
SCNM1-203ENST00000459799 MYO3AQ8NEV4 1616 aa15.46■□□□□ 0.07
SCNM1-203ENST00000459799 SUPT6HQ7KZ85 1726 aaKnown RBP15.46■□□□□ 0.07
SCNM1-203ENST00000459799 MLH3Q9UHC1 1453 aa15.46■□□□□ 0.06
SCNM1-203ENST00000459799 ARHGAP5Q13017 1502 aa15.45■□□□□ 0.06
SCNM1-203ENST00000459799 NPATQ14207 1427 aa15.44■□□□□ 0.06
SCNM1-203ENST00000459799 CDC42BPBQ9Y5S2 1711 aa15.44■□□□□ 0.06
SCNM1-203ENST00000459799 EFCAB2Q5VUJ9 269 aa15.44■□□□□ 0.06
SCNM1-203ENST00000459799 PLA2R1Q13018 1463 aa15.44■□□□□ 0.06
SCNM1-203ENST00000459799 CNTLNQ9NXG0 1405 aa15.43■□□□□ 0.06
SCNM1-203ENST00000459799 AFAP1Q8N556 730 aa15.43■□□□□ 0.06
SCNM1-203ENST00000459799 TCOF1Q13428 1488 aaKnown RBP15.43■□□□□ 0.06
SCNM1-203ENST00000459799 ITSN2Q9NZM3 1697 aa15.43■□□□□ 0.06
SCNM1-203ENST00000459799 KIDINS220Q9ULH0 1771 aa15.43■□□□□ 0.06
SCNM1-203ENST00000459799 RANGAP1P46060 587 aaPredicted RBP15.42■□□□□ 0.06
SCNM1-203ENST00000459799 ABCC1P33527 1531 aa15.42■□□□□ 0.06
SCNM1-203ENST00000459799 CEP170BQ9Y4F5 1589 aaPredicted RBP15.41■□□□□ 0.06
SCNM1-203ENST00000459799 NCKAP5LQ9HCH0 1330 aa15.4■□□□□ 0.06
SCNM1-203ENST00000459799 PREX2Q70Z35 1606 aa15.39■□□□□ 0.05
SCNM1-203ENST00000459799 LRRIQ1Q96JM4 1722 aa15.38■□□□□ 0.05
SCNM1-203ENST00000459799 HSPA1LP34931 641 aa15.38■□□□□ 0.05
SCNM1-203ENST00000459799 ESF1Q9H501 851 aaKnown RBP15.37■□□□□ 0.05
SCNM1-203ENST00000459799 CLTCQ00610 1675 aaKnown RBP15.37■□□□□ 0.05
SCNM1-203ENST00000459799 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
SCNM1-203ENST00000459799 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
SCNM1-203ENST00000459799 ALKQ9UM73 1620 aa15.35■□□□□ 0.05
SCNM1-203ENST00000459799 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
SCNM1-203ENST00000459799 PKD2Q13563 968 aa15.33■□□□□ 0.04
SCNM1-203ENST00000459799 MYT1LQ9UL68 1186 aa15.33■□□□□ 0.04
SCNM1-203ENST00000459799 CPS1P31327 1500 aa15.33■□□□□ 0.04
SCNM1-203ENST00000459799 NEURL4Q96JN8 1562 aa15.32■□□□□ 0.04
SCNM1-203ENST00000459799 ZMYM3Q14202 1370 aa15.32■□□□□ 0.04
SCNM1-203ENST00000459799 PLXNC1O60486 1568 aa15.32■□□□□ 0.04
SCNM1-203ENST00000459799 PTPRKQ15262 1439 aa15.31■□□□□ 0.04
SCNM1-203ENST00000459799 SAMD9LQ8IVG5 1584 aa15.31■□□□□ 0.04
SCNM1-203ENST00000459799 DNMT1P26358 1616 aaKnown RBP15.3■□□□□ 0.04
SCNM1-203ENST00000459799 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
SCNM1-203ENST00000459799 CDC42BPAQ5VT25 1732 aa15.3■□□□□ 0.04
SCNM1-203ENST00000459799 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
SCNM1-203ENST00000459799 CLIP1P30622 1438 aa15.29■□□□□ 0.04
SCNM1-203ENST00000459799 FMN1Q68DA7 1419 aa15.28■□□□□ 0.04
SCNM1-203ENST00000459799 EEA1Q15075 1411 aa15.26■□□□□ 0.03
SCNM1-203ENST00000459799 VWDEQ8N2E2 1590 aa15.26■□□□□ 0.03
SCNM1-203ENST00000459799 INO80Q9ULG1 1556 aaPredicted RBP15.26■□□□□ 0.03
SCNM1-203ENST00000459799 A2ML1A8K2U0 1454 aa15.26■□□□□ 0.03
SCNM1-203ENST00000459799 SHANK2Q9UPX8 1470 aa15.26■□□□□ 0.03
SCNM1-203ENST00000459799 TOM1O60784 492 aa15.25■□□□□ 0.03
SCNM1-203ENST00000459799 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
SCNM1-203ENST00000459799 SYCP2Q9BX26 1530 aa15.24■□□□□ 0.03
SCNM1-203ENST00000459799 ARHGAP35Q9NRY4 1499 aa15.24■□□□□ 0.03
SCNM1-203ENST00000459799 ATP7AQ04656 1500 aa15.23■□□□□ 0.03
SCNM1-203ENST00000459799 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
SCNM1-203ENST00000459799 RNF17Q9BXT8 1623 aaKnown RBP15.21■□□□□ 0.02
SCNM1-203ENST00000459799 STRCP1A6NGW2 1772 aa15.2■□□□□ 0.02
SCNM1-203ENST00000459799 A2MP01023 1474 aa15.18■□□□□ 0.02
SCNM1-203ENST00000459799 ADGBQ8N7X0 1667 aa15.18■□□□□ 0.02
SCNM1-203ENST00000459799 SYNMO15061 1565 aa15.17■□□□□ 0.02
SCNM1-203ENST00000459799 RGS17Q9UGC6 210 aaPredicted RBP15.17■□□□□ 0.02
SCNM1-203ENST00000459799 DEPDC5O75140 1603 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms