RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 NOL8Q76FK4 1167 aaKnown RBP25.04■■□□□ 1.6
SNX27-204ENST00000458013 PAK3O75914 559 aaPredicted RBP25.04■■□□□ 1.6
SNX27-204ENST00000458013 HSPA5P11021 654 aaKnown RBP25.03■■□□□ 1.6
SNX27-204ENST00000458013 MCCP23508 829 aa25.02■■□□□ 1.6
SNX27-204ENST00000458013 ITPRIPQ8IWB1 547 aa25.02■■□□□ 1.6
SNX27-204ENST00000458013 RTF1Q92541 710 aaKnown RBP24.98■■□□□ 1.59
SNX27-204ENST00000458013 HSP90B1P14625 803 aaKnown RBP24.97■■□□□ 1.59
SNX27-204ENST00000458013 TRHP20396 242 aaPredicted RBP24.97■■□□□ 1.59
SNX27-204ENST00000458013 NRDCO43847 1150 aa24.96■■□□□ 1.59
SNX27-204ENST00000458013 MFAP1P55081 439 aaKnown RBP24.96■■□□□ 1.59
SNX27-204ENST00000458013 NUTM2DQ5VT03 806 aaPredicted RBP24.95■■□□□ 1.58
SNX27-204ENST00000458013 FOXD4L5Q5VV16 416 aaPredicted RBP24.95■■□□□ 1.58
SNX27-204ENST00000458013 FOXD4L4Q8WXT5 416 aaPredicted RBP24.95■■□□□ 1.58
SNX27-204ENST00000458013 MS4A1P11836 297 aa24.95■■□□□ 1.58
SNX27-204ENST00000458013 L1TD1Q5T7N2 865 aaKnown RBP24.94■■□□□ 1.58
SNX27-204ENST00000458013 CCDC146Q8IYE0 955 aa24.94■■□□□ 1.58
SNX27-204ENST00000458013 PNNQ9H307 717 aaKnown RBP24.94■■□□□ 1.58
SNX27-204ENST00000458013 CCNB3Q8WWL7 1395 aa24.93■■□□□ 1.58
SNX27-204ENST00000458013 CHMP4BQ9H444 224 aaKnown RBP24.92■■□□□ 1.58
SNX27-204ENST00000458013 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
SNX27-204ENST00000458013 CHMP3Q9Y3E7 222 aa24.91■■□□□ 1.58
SNX27-204ENST00000458013 CREBRFQ8IUR6 639 aa24.9■■□□□ 1.58
SNX27-204ENST00000458013 GGT6Q6P531 493 aa24.9■■□□□ 1.58
SNX27-204ENST00000458013 KIAA1211Q6ZU35 1233 aa24.87■■□□□ 1.57
SNX27-204ENST00000458013 U2AF1L5P0DN76 240 aaPredicted RBP24.86■■□□□ 1.57
SNX27-204ENST00000458013 U2AF1Q01081 240 aaKnown RBP eCLIP24.86■■□□□ 1.571e-6■■■■□ 25.4
SNX27-204ENST00000458013 NOC3LQ8WTT2 800 aaKnown RBP24.86■■□□□ 1.57
SNX27-204ENST00000458013 CCDC9Q9Y3X0 531 aaKnown RBP24.85■■□□□ 1.57
SNX27-204ENST00000458013 CSB-PGBD3P0DP91 1061 aa24.85■■□□□ 1.57
SNX27-204ENST00000458013 ERCC6Q03468 1493 aa24.85■■□□□ 1.57
SNX27-204ENST00000458013 TRIM6-TRIM34B2RNG4 842 aa24.84■■□□□ 1.57
SNX27-204ENST00000458013 KIF27Q86VH2 1401 aa24.84■■□□□ 1.57
SNX27-204ENST00000458013 CLUAP1Q96AJ1 413 aa24.83■■□□□ 1.56
SNX27-204ENST00000458013 RCAN3Q9UKA8 241 aa24.83■■□□□ 1.56
SNX27-204ENST00000458013 KTN1Q86UP2 1357 aaKnown RBP24.82■■□□□ 1.56
SNX27-204ENST00000458013 KANK1Q14678 1352 aa24.81■■□□□ 1.56
SNX27-204ENST00000458013 CEP164Q9UPV0 1460 aa24.81■■□□□ 1.56
SNX27-204ENST00000458013 PKD2Q13563 968 aa24.8■■□□□ 1.56
SNX27-204ENST00000458013 SLC4A10Q6U841 1118 aa24.8■■□□□ 1.56
SNX27-204ENST00000458013 TNIKQ9UKE5 1360 aa24.79■■□□□ 1.56
SNX27-204ENST00000458013 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
SNX27-204ENST00000458013 ROCK2O75116 1388 aaKnown RBP24.79■■□□□ 1.56
SNX27-204ENST00000458013 PRM3Q9NNZ6 103 aa24.79■■□□□ 1.56
SNX27-204ENST00000458013 KIAA2012Q0VF49 1180 aa24.76■■□□□ 1.55
SNX27-204ENST00000458013 HDGFL2Q7Z4V5 671 aaPredicted RBP24.76■■□□□ 1.55
SNX27-204ENST00000458013 GBP4Q96PP9 640 aa24.76■■□□□ 1.55
SNX27-204ENST00000458013 NUTM2FA1L443 756 aa24.75■■□□□ 1.55
SNX27-204ENST00000458013 FOXD4L6Q3SYB3 417 aaPredicted RBP24.75■■□□□ 1.55
SNX27-204ENST00000458013 FOXD4L3Q6VB84 417 aaPredicted RBP24.75■■□□□ 1.55
SNX27-204ENST00000458013 EEA1Q15075 1411 aa24.74■■□□□ 1.55
SNX27-204ENST00000458013 SLC4A3P48751 1232 aa24.72■■□□□ 1.55
SNX27-204ENST00000458013 GORABQ5T7V8 394 aa24.72■■□□□ 1.55
SNX27-204ENST00000458013 SMC4Q9NTJ3 1288 aa24.72■■□□□ 1.55
SNX27-204ENST00000458013 LTV1Q96GA3 475 aaPredicted RBP24.72■■□□□ 1.55
SNX27-204ENST00000458013 KANK4Q5T7N3 995 aaPredicted RBP24.7■■□□□ 1.55
SNX27-204ENST00000458013 RWDD1Q9H446 243 aaPredicted RBP24.7■■□□□ 1.54
SNX27-204ENST00000458013 RRP7AQ9Y3A4 280 aaKnown RBP24.7■■□□□ 1.54
SNX27-204ENST00000458013 IPO8O15397 1037 aaKnown RBP24.69■■□□□ 1.54
SNX27-204ENST00000458013 GOLGA6L3A6NEY3 463 aa24.67■■□□□ 1.54
SNX27-204ENST00000458013 TAF7LQ5H9L4 462 aa24.67■■□□□ 1.54
SNX27-204ENST00000458013 SOGA1O94964 1423 aa24.67■■□□□ 1.54
SNX27-204ENST00000458013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.67■■□□□ 1.547e-6■■□□□ 11.5
SNX27-204ENST00000458013 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
SNX27-204ENST00000458013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.66■■□□□ 1.54
SNX27-204ENST00000458013 CCER2I3L3R5 266 aa24.65■■□□□ 1.54
SNX27-204ENST00000458013 RASSF8Q8NHQ8 419 aa24.65■■□□□ 1.54
SNX27-204ENST00000458013 TSHZ2Q9NRE2 1034 aa24.65■■□□□ 1.54
SNX27-204ENST00000458013 A0A0U1RQG5 324 aaPredicted RBP24.65■■□□□ 1.54
SNX27-204ENST00000458013 TOMM22Q9NS69 142 aa24.64■■□□□ 1.53
SNX27-204ENST00000458013 VPS53Q5VIR6 699 aa24.62■■□□□ 1.53
SNX27-204ENST00000458013 ARHGAP35Q9NRY4 1499 aa24.61■■□□□ 1.53
SNX27-204ENST00000458013 PLIN1O60240 522 aa24.61■■□□□ 1.53
SNX27-204ENST00000458013 BCL2L13Q9BXK5 485 aa24.6■■□□□ 1.53
SNX27-204ENST00000458013 FBXO3Q9UK99 471 aa24.58■■□□□ 1.52
SNX27-204ENST00000458013 WWC1Q8IX03 1113 aa24.57■■□□□ 1.52
SNX27-204ENST00000458013 CUX2O14529 1486 aa24.57■■□□□ 1.52
SNX27-204ENST00000458013 STK31Q9BXU1 1019 aa24.57■■□□□ 1.52
SNX27-204ENST00000458013 RB1CC1Q8TDY2 1594 aa24.57■■□□□ 1.52
SNX27-204ENST00000458013 TPM4P67936 248 aa24.57■■□□□ 1.52
SNX27-204ENST00000458013 PMFBP1Q8TBY8 1022 aa24.57■■□□□ 1.52
SNX27-204ENST00000458013 MPHOSPH9Q99550 1183 aa24.57■■□□□ 1.52
SNX27-204ENST00000458013 ELL2O00472 640 aaPredicted RBP24.56■■□□□ 1.52
SNX27-204ENST00000458013 TNNT3P45378 269 aaPredicted RBP24.56■■□□□ 1.52
SNX27-204ENST00000458013 HDGFP51858 240 aaKnown RBP24.56■■□□□ 1.52
SNX27-204ENST00000458013 PES1O00541 588 aaKnown RBP24.56■■□□□ 1.52
SNX27-204ENST00000458013 IPO9Q96P70 1041 aaKnown RBP24.55■■□□□ 1.52
SNX27-204ENST00000458013 TCERG1O14776 1098 aaKnown RBP24.54■■□□□ 1.52
SNX27-204ENST00000458013 G3V3G9 751 aa24.54■■□□□ 1.52
SNX27-204ENST00000458013 DCAF8Q5TAQ9 597 aa24.54■■□□□ 1.52
SNX27-204ENST00000458013 RILPL2Q969X0 211 aa24.54■■□□□ 1.52
SNX27-204ENST00000458013 SYAP1Q96A49 352 aaPredicted RBP24.54■■□□□ 1.52
SNX27-204ENST00000458013 GPATCH3Q96I76 525 aa24.54■■□□□ 1.52
SNX27-204ENST00000458013 CALD1Q05682 793 aaKnown RBP24.53■■□□□ 1.52
SNX27-204ENST00000458013 CARMIL1Q5VZK9 1371 aa24.53■■□□□ 1.52
SNX27-204ENST00000458013 RAB3GAP2Q9H2M9 1393 aa24.52■■□□□ 1.52
SNX27-204ENST00000458013 SPAG9O60271 1321 aaKnown RBP24.52■■□□□ 1.52
SNX27-204ENST00000458013 ABCC8Q09428 1581 aa24.52■■□□□ 1.52
SNX27-204ENST00000458013 BCL11BQ9C0K0 894 aaPredicted RBP24.51■■□□□ 1.51
SNX27-204ENST00000458013 NUP155O75694 1391 aa24.51■■□□□ 1.51
SNX27-204ENST00000458013 HNRNPMP52272 730 aaKnown RBP eCLIP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms