RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 ANKRD30AQ9BXX3 1397 aa21.91■■□□□ 1.1
LSS-205ENST00000457828 SLC24A1O60721 1099 aa21.89■■□□□ 1.1
LSS-205ENST00000457828 HSPA5P11021 654 aaKnown RBP21.89■■□□□ 1.1
LSS-205ENST00000457828 PLEKHG5O94827 1062 aa21.89■■□□□ 1.09
LSS-205ENST00000457828 ZBTB47Q9UFB7 747 aaPredicted RBP21.88■■□□□ 1.09
LSS-205ENST00000457828 NUP155O75694 1391 aa21.88■■□□□ 1.09
LSS-205ENST00000457828 ARAP1Q96P48 1450 aa21.87■■□□□ 1.09
LSS-205ENST00000457828 NEFMP07197 916 aa21.85■■□□□ 1.09
LSS-205ENST00000457828 DCAF11Q8TEB1 546 aa21.84■■□□□ 1.09
LSS-205ENST00000457828 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.08
LSS-205ENST00000457828 ZNF644Q9H582 1327 aaPredicted RBP21.82■■□□□ 1.08
LSS-205ENST00000457828 WASHC2CQ9Y4E1 1318 aa21.82■■□□□ 1.08
LSS-205ENST00000457828 CARD11Q9BXL7 1154 aa21.81■■□□□ 1.08
LSS-205ENST00000457828 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
LSS-205ENST00000457828 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
LSS-205ENST00000457828 KIAA0586Q9BVV6 1533 aa21.79■■□□□ 1.08
LSS-205ENST00000457828 MPHOSPH9Q99550 1183 aa21.79■■□□□ 1.08
LSS-205ENST00000457828 RRBP1Q9P2E9 1410 aaKnown RBP21.78■■□□□ 1.08
LSS-205ENST00000457828 PHLDB1Q86UU1 1377 aa21.76■■□□□ 1.07
LSS-205ENST00000457828 POGKQ9P215 609 aa21.76■■□□□ 1.07
LSS-205ENST00000457828 MAGI1Q96QZ7 1491 aaPredicted RBP21.75■■□□□ 1.07
LSS-205ENST00000457828 GRIN2AQ12879 1464 aa21.74■■□□□ 1.07
LSS-205ENST00000457828 HDGFP51858 240 aaKnown RBP21.73■■□□□ 1.07
LSS-205ENST00000457828 NOP58Q9Y2X3 529 aaKnown RBP21.73■■□□□ 1.07
LSS-205ENST00000457828 CASKIN1Q8WXD9 1431 aa21.72■■□□□ 1.07
LSS-205ENST00000457828 AFAP1Q8N556 730 aa21.72■■□□□ 1.07
LSS-205ENST00000457828 DEKP35659 375 aaKnown RBP21.68■■□□□ 1.06
LSS-205ENST00000457828 SAFB2Q14151 953 aaKnown RBP eCLIP21.66■■□□□ 1.06
LSS-205ENST00000457828 ZBTB7CA1YPR0 619 aa21.66■■□□□ 1.06
LSS-205ENST00000457828 L3MBTL2Q969R5 705 aa21.66■■□□□ 1.06
LSS-205ENST00000457828 STK26Q9P289 416 aa21.64■■□□□ 1.05
LSS-205ENST00000457828 NUTM2DQ5VT03 806 aaPredicted RBP21.64■■□□□ 1.05
LSS-205ENST00000457828 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
LSS-205ENST00000457828 LMOD2Q6P5Q4 547 aa21.61■■□□□ 1.05
LSS-205ENST00000457828 IQGAP2Q13576 1575 aa21.6■■□□□ 1.05
LSS-205ENST00000457828 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
LSS-205ENST00000457828 MYOM3Q5VTT5 1437 aa21.6■■□□□ 1.05
LSS-205ENST00000457828 EFCAB5A4FU69 1503 aa21.6■■□□□ 1.05
LSS-205ENST00000457828 WDR97A6NE52 1622 aa21.59■■□□□ 1.05
LSS-205ENST00000457828 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
LSS-205ENST00000457828 CDCA8Q53HL2 280 aa21.58■■□□□ 1.05
LSS-205ENST00000457828 ERICH6BQ5W0A0 696 aa21.58■■□□□ 1.05
LSS-205ENST00000457828 FGD6Q6ZV73 1430 aa21.58■■□□□ 1.04
LSS-205ENST00000457828 NCOA2Q15596 1464 aa21.57■■□□□ 1.04
LSS-205ENST00000457828 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
LSS-205ENST00000457828 FYCO1Q9BQS8 1478 aa21.56■■□□□ 1.04
LSS-205ENST00000457828 BIVM-ERCC5R4GMW8 1640 aa21.56■■□□□ 1.04
LSS-205ENST00000457828 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
LSS-205ENST00000457828 PRKRIP1Q9H875 184 aaPredicted RBP21.55■■□□□ 1.04
LSS-205ENST00000457828 PLB1Q6P1J6 1458 aa21.55■■□□□ 1.04
LSS-205ENST00000457828 CUL7Q14999 1698 aa21.53■■□□□ 1.04
LSS-205ENST00000457828 CANXP27824 592 aaKnown RBP21.53■■□□□ 1.04
LSS-205ENST00000457828 RTN4Q9NQC3 1192 aaKnown RBP21.53■■□□□ 1.04
LSS-205ENST00000457828 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
LSS-205ENST00000457828 ARHGAP5Q13017 1502 aa21.52■■□□□ 1.04
LSS-205ENST00000457828 TROQ12816 1431 aaPredicted RBP21.52■■□□□ 1.04
LSS-205ENST00000457828 FANCIQ9NVI1 1328 aa21.52■■□□□ 1.04
LSS-205ENST00000457828 KIF15Q9NS87 1388 aa21.52■■□□□ 1.04
LSS-205ENST00000457828 EID1Q9Y6B2 187 aa21.52■■□□□ 1.03
LSS-205ENST00000457828 KNSTRNQ9Y448 316 aa21.5■■□□□ 1.03
LSS-205ENST00000457828 PPM1GO15355 546 aaPredicted RBP21.5■■□□□ 1.03
LSS-205ENST00000457828 SRPK2P78362 688 aaKnown RBP21.5■■□□□ 1.03
LSS-205ENST00000457828 EIF5BO60841 1220 aaKnown RBP21.49■■□□□ 1.03
LSS-205ENST00000457828 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
LSS-205ENST00000457828 WDR43Q15061 677 aaKnown RBP eCLIP21.48■■□□□ 1.035e-11■□□□□ 10.1
LSS-205ENST00000457828 A0A0G2JS52 829 aa21.48■■□□□ 1.03
LSS-205ENST00000457828 CDK13Q14004 1512 aaKnown RBP21.46■■□□□ 1.03
LSS-205ENST00000457828 CCDC184Q52MB2 194 aa21.44■■□□□ 1.02
LSS-205ENST00000457828 NUDCQ9Y266 331 aa21.43■■□□□ 1.02
LSS-205ENST00000457828 TMF1P82094 1093 aa21.43■■□□□ 1.02
LSS-205ENST00000457828 SCAPERQ9BY12 1400 aa21.43■■□□□ 1.02
LSS-205ENST00000457828 EPRSP07814 1512 aaKnown RBP21.42■■□□□ 1.02
LSS-205ENST00000457828 TNNT2P45379 298 aaPredicted RBP21.42■■□□□ 1.02
LSS-205ENST00000457828 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
LSS-205ENST00000457828 MSH5O43196 834 aa21.41■■□□□ 1.02
LSS-205ENST00000457828 TIAM1Q13009 1591 aa21.39■■□□□ 1.01
LSS-205ENST00000457828 WDR62O43379 1518 aa21.39■■□□□ 1.01
LSS-205ENST00000457828 CC2D1BQ5T0F9 858 aaKnown RBP21.39■■□□□ 1.01
LSS-205ENST00000457828 CCDC144AA2RUR9 1427 aa21.39■■□□□ 1.01
LSS-205ENST00000457828 ANKRD50Q9ULJ7 1429 aa21.39■■□□□ 1.01
LSS-205ENST00000457828 SOX12O15370 315 aa21.38■■□□□ 1.01
LSS-205ENST00000457828 HECW1Q76N89 1606 aa21.37■■□□□ 1.01
LSS-205ENST00000457828 IPO9Q96P70 1041 aaKnown RBP21.37■■□□□ 1.01
LSS-205ENST00000457828 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
LSS-205ENST00000457828 CD109Q6YHK3 1445 aa21.36■■□□□ 1.01
LSS-205ENST00000457828 ARXQ96QS3 562 aa21.34■■□□□ 1.01
LSS-205ENST00000457828 TRAK1Q9UPV9 953 aa21.33■■□□□ 1.01
LSS-205ENST00000457828 NUTM2FA1L443 756 aa21.32■■□□□ 1
LSS-205ENST00000457828 CCDC7Q96M83 1385 aa21.32■■□□□ 1
LSS-205ENST00000457828 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.32■■□□□ 1
LSS-205ENST00000457828 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
LSS-205ENST00000457828 ARHGEF11O15085 1522 aa21.32■■□□□ 1
LSS-205ENST00000457828 MAPKBP1O60336 1514 aa21.32■■□□□ 1
LSS-205ENST00000457828 VGFO15240 615 aaPredicted RBP21.31■■□□□ 1
LSS-205ENST00000457828 EHBP1L1Q8N3D4 1523 aa21.31■■□□□ 1
LSS-205ENST00000457828 KIF7Q2M1P5 1343 aa21.31■■□□□ 1
LSS-205ENST00000457828 AEBP2Q6ZN18 517 aaPredicted RBP21.31■■□□□ 1
LSS-205ENST00000457828 RGS3P49796 1198 aa21.3■■□□□ 1
LSS-205ENST00000457828 DDRGK1Q96HY6 314 aa21.3■■□□□ 1
LSS-205ENST00000457828 CFAP53Q96M91 514 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms