RNA–Protein interactions for RNA: ENST00000456458.5

NT5C3A-208, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 1 (best)

Gene NT5C3A, Length 1,742 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-208ENST00000456458 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
NT5C3A-208ENST00000456458 ITSN2Q9NZM3 1697 aa20.58■□□□□ 0.88
NT5C3A-208ENST00000456458 CARMIL2Q6F5E8 1435 aa20.57■□□□□ 0.88
NT5C3A-208ENST00000456458 EIF4G2P78344 907 aaKnown RBP eCLIP20.56■□□□□ 0.88
NT5C3A-208ENST00000456458 ARID3CA6NKF2 412 aa20.55■□□□□ 0.88
NT5C3A-208ENST00000456458 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
NT5C3A-208ENST00000456458 ADCY10Q96PN6 1610 aa20.54■□□□□ 0.88
NT5C3A-208ENST00000456458 ANKRD30BQ9BXX2 1392 aa20.53■□□□□ 0.88
NT5C3A-208ENST00000456458 RPRD2Q5VT52 1461 aaKnown RBP20.53■□□□□ 0.88
NT5C3A-208ENST00000456458 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
NT5C3A-208ENST00000456458 HSPA5P11021 654 aaKnown RBP20.52■□□□□ 0.88
NT5C3A-208ENST00000456458 NUP160Q12769 1436 aa20.5■□□□□ 0.87
NT5C3A-208ENST00000456458 ADGBQ8N7X0 1667 aa20.5■□□□□ 0.87
NT5C3A-208ENST00000456458 CAMSAP2Q08AD1 1489 aa20.49■□□□□ 0.87
NT5C3A-208ENST00000456458 L3MBTL2Q969R5 705 aa20.49■□□□□ 0.87
NT5C3A-208ENST00000456458 NEFLP07196 543 aa20.48■□□□□ 0.87
NT5C3A-208ENST00000456458 CFDP1Q9UEE9 299 aaPredicted RBP20.48■□□□□ 0.87
NT5C3A-208ENST00000456458 ADGRL2O95490 1459 aa20.48■□□□□ 0.87
NT5C3A-208ENST00000456458 PRG4Q92954 1404 aaPredicted RBP20.47■□□□□ 0.87
NT5C3A-208ENST00000456458 GPATCH8Q9UKJ3 1502 aaKnown RBP20.47■□□□□ 0.87
NT5C3A-208ENST00000456458 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
NT5C3A-208ENST00000456458 WASHC2AQ641Q2 1341 aa20.46■□□□□ 0.87
NT5C3A-208ENST00000456458 ZNF644Q9H582 1327 aaPredicted RBP20.45■□□□□ 0.86
NT5C3A-208ENST00000456458 PLB1Q6P1J6 1458 aa20.45■□□□□ 0.86
NT5C3A-208ENST00000456458 JPH4Q96JJ6 628 aa20.44■□□□□ 0.86
NT5C3A-208ENST00000456458 NCOA1Q15788 1441 aa20.44■□□□□ 0.86
NT5C3A-208ENST00000456458 TEX14Q8IWB6 1497 aa20.44■□□□□ 0.86
NT5C3A-208ENST00000456458 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
NT5C3A-208ENST00000456458 CROCC2H7BZ55 1655 aa20.43■□□□□ 0.86
NT5C3A-208ENST00000456458 ANKRD30AQ9BXX3 1397 aa20.42■□□□□ 0.86
NT5C3A-208ENST00000456458 FKBP8Q14318 412 aa20.4■□□□□ 0.86
NT5C3A-208ENST00000456458 PZPP20742 1482 aa20.39■□□□□ 0.86
NT5C3A-208ENST00000456458 FOXD1Q16676 465 aa20.39■□□□□ 0.86
NT5C3A-208ENST00000456458 ABCA8O94911 1581 aa20.39■□□□□ 0.85
NT5C3A-208ENST00000456458 KIF14Q15058 1648 aa20.38■□□□□ 0.85
NT5C3A-208ENST00000456458 CCDC7Q96M83 1385 aa20.38■□□□□ 0.85
NT5C3A-208ENST00000456458 SHANK2Q9UPX8 1470 aa20.38■□□□□ 0.85
NT5C3A-208ENST00000456458 PLEKHD1A6NEE1 506 aa20.38■□□□□ 0.85
NT5C3A-208ENST00000456458 FBLN2P98095 1184 aa20.37■□□□□ 0.85
NT5C3A-208ENST00000456458 KIAA1107Q9UPP5 1409 aa20.37■□□□□ 0.85
NT5C3A-208ENST00000456458 POLR1AO95602 1720 aaPredicted RBP20.35■□□□□ 0.85
NT5C3A-208ENST00000456458 SPATA31E1Q6ZUB1 1445 aa20.34■□□□□ 0.85
NT5C3A-208ENST00000456458 NBPF8Q3BBV2 869 aa20.33■□□□□ 0.84
NT5C3A-208ENST00000456458 ABCC10Q5T3U5 1492 aa20.32■□□□□ 0.84
NT5C3A-208ENST00000456458 ANKRD50Q9ULJ7 1429 aa20.32■□□□□ 0.84
NT5C3A-208ENST00000456458 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
NT5C3A-208ENST00000456458 ZNF777Q9ULD5 760 aaPredicted RBP20.31■□□□□ 0.84
NT5C3A-208ENST00000456458 ATP10BO94823 1461 aa20.31■□□□□ 0.84
NT5C3A-208ENST00000456458 CDC42BPAQ5VT25 1732 aa20.31■□□□□ 0.84
NT5C3A-208ENST00000456458 MBD5Q9P267 1494 aa20.3■□□□□ 0.84
NT5C3A-208ENST00000456458 HNRNPUQ00839 825 aaKnown RBP eCLIP20.29■□□□□ 0.84
NT5C3A-208ENST00000456458 C9orf84Q5VXU9 1444 aa20.27■□□□□ 0.84
NT5C3A-208ENST00000456458 KDM5DQ9BY66 1539 aa20.27■□□□□ 0.84
NT5C3A-208ENST00000456458 PRKRIP1Q9H875 184 aaPredicted RBP20.27■□□□□ 0.83
NT5C3A-208ENST00000456458 ARID4BQ4LE39 1312 aaPredicted RBP20.26■□□□□ 0.83
NT5C3A-208ENST00000456458 ARHGEF5Q12774 1597 aa20.26■□□□□ 0.83
NT5C3A-208ENST00000456458 TSPY4P0CV99 314 aa20.26■□□□□ 0.83
NT5C3A-208ENST00000456458 TSPY10P0CW01 314 aa20.26■□□□□ 0.83
NT5C3A-208ENST00000456458 PKD2Q13563 968 aa20.25■□□□□ 0.83
NT5C3A-208ENST00000456458 C11orf95C9JLR9 678 aaPredicted RBP20.24■□□□□ 0.83
NT5C3A-208ENST00000456458 BCANQ96GW7 911 aa20.24■□□□□ 0.83
NT5C3A-208ENST00000456458 KIF7Q2M1P5 1343 aa20.24■□□□□ 0.83
NT5C3A-208ENST00000456458 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
NT5C3A-208ENST00000456458 RSPH4AQ5TD94 716 aa20.23■□□□□ 0.83
NT5C3A-208ENST00000456458 UHRF1BP1Q6BDS2 1440 aa20.23■□□□□ 0.83
NT5C3A-208ENST00000456458 ERICH6BQ5W0A0 696 aa20.22■□□□□ 0.83
NT5C3A-208ENST00000456458 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
NT5C3A-208ENST00000456458 PTPRGP23470 1445 aa20.21■□□□□ 0.83
NT5C3A-208ENST00000456458 NUP155O75694 1391 aa20.2■□□□□ 0.83
NT5C3A-208ENST00000456458 USP47Q96K76 1375 aa20.18■□□□□ 0.82
NT5C3A-208ENST00000456458 MRS2Q9HD23 443 aa20.17■□□□□ 0.82
NT5C3A-208ENST00000456458 RALGAPBQ86X10 1494 aa20.17■□□□□ 0.82
NT5C3A-208ENST00000456458 ROCK2O75116 1388 aaKnown RBP20.16■□□□□ 0.82
NT5C3A-208ENST00000456458 CCDC141Q6ZP82 1450 aa20.16■□□□□ 0.82
NT5C3A-208ENST00000456458 KIF15Q9NS87 1388 aa20.16■□□□□ 0.82
NT5C3A-208ENST00000456458 KDM5CP41229 1560 aa20.15■□□□□ 0.82
NT5C3A-208ENST00000456458 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.82
NT5C3A-208ENST00000456458 PREX2Q70Z35 1606 aa20.14■□□□□ 0.81
NT5C3A-208ENST00000456458 SAMD9LQ8IVG5 1584 aa20.1■□□□□ 0.81
NT5C3A-208ENST00000456458 MAST1Q9Y2H9 1570 aa20.09■□□□□ 0.81
NT5C3A-208ENST00000456458 HNRNPMP52272 730 aaKnown RBP eCLIP20.09■□□□□ 0.81
NT5C3A-208ENST00000456458 CCDC184Q52MB2 194 aa20.09■□□□□ 0.81
NT5C3A-208ENST00000456458 CDC42BPBQ9Y5S2 1711 aa20.08■□□□□ 0.81
NT5C3A-208ENST00000456458 FAM9BQ8IZU0 186 aa20.08■□□□□ 0.81
NT5C3A-208ENST00000456458 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.81
NT5C3A-208ENST00000456458 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
NT5C3A-208ENST00000456458 PLEKHH2Q8IVE3 1493 aa20.07■□□□□ 0.8
NT5C3A-208ENST00000456458 BCORL1Q5H9F3 1711 aa20.07■□□□□ 0.8
NT5C3A-208ENST00000456458 SHROOM2Q13796 1616 aa20.07■□□□□ 0.8
NT5C3A-208ENST00000456458 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
NT5C3A-208ENST00000456458 FAM135AQ9P2D6 1515 aa20.05■□□□□ 0.8
NT5C3A-208ENST00000456458 KTN1Q86UP2 1357 aaKnown RBP20.04■□□□□ 0.8
NT5C3A-208ENST00000456458 CHD1O14646 1710 aa20.03■□□□□ 0.8
NT5C3A-208ENST00000456458 UNC13BO14795 1591 aa20.01■□□□□ 0.79
NT5C3A-208ENST00000456458 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
NT5C3A-208ENST00000456458 PPP4R2Q9NY27 417 aa20.01■□□□□ 0.79
NT5C3A-208ENST00000456458 ABCC2Q92887 1545 aa20■□□□□ 0.79
NT5C3A-208ENST00000456458 PLXNC1O60486 1568 aa20■□□□□ 0.79
NT5C3A-208ENST00000456458 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
NT5C3A-208ENST00000456458 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms