RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NCOA2Q15596 1464 aa6.16□□□□□ -1.42
DEPDC1-202ENST00000456315 CCDC7Q96M83 1385 aa6.15□□□□□ -1.42
DEPDC1-202ENST00000456315 NCOA1Q15788 1441 aa6.15□□□□□ -1.42
DEPDC1-202ENST00000456315 LRRC9Q6ZRR7 1453 aa6.14□□□□□ -1.43
DEPDC1-202ENST00000456315 NUDCQ9Y266 331 aa6.14□□□□□ -1.43
DEPDC1-202ENST00000456315 CHIC2Q9UKJ5 165 aa6.14□□□□□ -1.43
DEPDC1-202ENST00000456315 CDH23Q9H251 3354 aa6.13□□□□□ -1.43
DEPDC1-202ENST00000456315 C8orf34Q49A92 452 aa6.13□□□□□ -1.43
DEPDC1-202ENST00000456315 TONSLQ96HA7 1378 aa6.13□□□□□ -1.43
DEPDC1-202ENST00000456315 RRP7BPQ9NSQ0 103 aa6.13□□□□□ -1.43
DEPDC1-202ENST00000456315 ARID4BQ4LE39 1312 aaPredicted RBP6.13□□□□□ -1.43
DEPDC1-202ENST00000456315 MYT1LQ9UL68 1186 aa6.13□□□□□ -1.43
DEPDC1-202ENST00000456315 LAMC3Q9Y6N6 1575 aa6.13□□□□□ -1.43
DEPDC1-202ENST00000456315 SMG6Q86US8 1419 aaKnown RBP6.12□□□□□ -1.43
DEPDC1-202ENST00000456315 CNTLNQ9NXG0 1405 aa6.12□□□□□ -1.43
DEPDC1-202ENST00000456315 IGF1RP08069 1367 aa6.12□□□□□ -1.43
DEPDC1-202ENST00000456315 FHAD1B1AJZ9 1412 aa6.12□□□□□ -1.43
DEPDC1-202ENST00000456315 ANP32AP39687 249 aaKnown RBP6.12□□□□□ -1.43
DEPDC1-202ENST00000456315 BCORL1Q5H9F3 1711 aa6.12□□□□□ -1.43
DEPDC1-202ENST00000456315 RTL5Q5HYW3 569 aaPredicted RBP6.12□□□□□ -1.43
DEPDC1-202ENST00000456315 SPINK5Q9NQ38 1064 aaPredicted RBP6.12□□□□□ -1.43
DEPDC1-202ENST00000456315 ARXQ96QS3 562 aa6.11□□□□□ -1.43
DEPDC1-202ENST00000456315 TIAM1Q13009 1591 aa6.11□□□□□ -1.43
DEPDC1-202ENST00000456315 XRCC6P12956 609 aaKnown RBP eCLIP6.11□□□□□ -1.43
DEPDC1-202ENST00000456315 MYOM3Q5VTT5 1437 aa6.11□□□□□ -1.43
DEPDC1-202ENST00000456315 PRDM4Q9UKN5 801 aa6.1□□□□□ -1.43
DEPDC1-202ENST00000456315 KIF21AQ7Z4S6 1674 aa6.1□□□□□ -1.43
DEPDC1-202ENST00000456315 AEBP2Q6ZN18 517 aaPredicted RBP6.1□□□□□ -1.43
DEPDC1-202ENST00000456315 ATP1B4Q9UN42 357 aaPredicted RBP6.1□□□□□ -1.43
DEPDC1-202ENST00000456315 ANTXR1Q9H6X2 564 aa6.1□□□□□ -1.43
DEPDC1-202ENST00000456315 DMRT2Q9Y5R5 561 aa6.1□□□□□ -1.43
DEPDC1-202ENST00000456315 RRP1P56182 461 aaKnown RBP6.09□□□□□ -1.43
DEPDC1-202ENST00000456315 EIF4G2P78344 907 aaKnown RBP eCLIP6.09□□□□□ -1.43
DEPDC1-202ENST00000456315 CCDC18Q5T9S5 1454 aa6.09□□□□□ -1.44
DEPDC1-202ENST00000456315 GAS2L3Q86XJ1 694 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 USP35Q9P2H5 1018 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 MAP3K1Q13233 1512 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 FHOD3Q2V2M9 1422 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 UACAQ9BZF9 1416 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 LRPPRCP42704 1394 aaKnown RBP6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 CRBNQ96SW2 442 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 KDM2BQ8NHM5 1336 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 HFM1A2PYH4 1435 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 CUX1P39880 1505 aa6.08□□□□□ -1.44
DEPDC1-202ENST00000456315 JARID2Q92833 1246 aaPredicted RBP6.07□□□□□ -1.44
DEPDC1-202ENST00000456315 ZNF644Q9H582 1327 aaPredicted RBP6.07□□□□□ -1.44
DEPDC1-202ENST00000456315 PER1O15534 1290 aaPredicted RBP6.06□□□□□ -1.44
DEPDC1-202ENST00000456315 SLKQ9H2G2 1235 aaPredicted RBP6.06□□□□□ -1.44
DEPDC1-202ENST00000456315 TOP2BQ02880 1626 aa6.06□□□□□ -1.44
DEPDC1-202ENST00000456315 RGS3P49796 1198 aa6.05□□□□□ -1.44
DEPDC1-202ENST00000456315 ERICH3Q5RHP9 1530 aa6.05□□□□□ -1.44
DEPDC1-202ENST00000456315 POLR3GLQ9BT43 218 aa6.05□□□□□ -1.44
DEPDC1-202ENST00000456315 TNNQ9UQP3 1299 aa6.05□□□□□ -1.44
DEPDC1-202ENST00000456315 FGD6Q6ZV73 1430 aa6.05□□□□□ -1.44
DEPDC1-202ENST00000456315 IGHDP01880 384 aa6.05□□□□□ -1.44
DEPDC1-202ENST00000456315 RCAN3Q9UKA8 241 aa6.05□□□□□ -1.44
DEPDC1-202ENST00000456315 RIMBP3CA6NJZ7 1639 aa6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 RIMBP3BA6NNM3 1639 aa6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 RIMBP3Q9UFD9 1639 aa6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 TEX14Q8IWB6 1497 aa6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 TCERG1O14776 1098 aaKnown RBP6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 MPHOSPH9Q99550 1183 aa6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 FAM43AQ8N2R8 423 aa6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 A0A0U1RQG5 324 aaPredicted RBP6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 RIPK4P57078 832 aa6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 NLRP1Q9C000 1473 aa6.04□□□□□ -1.44
DEPDC1-202ENST00000456315 ANKRD30BQ9BXX2 1392 aa6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 EP400Q96L91 3159 aa6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 FSD2A1L4K1 749 aa6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 MAGI3Q5TCQ9 1506 aa6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 GZF1Q9H116 711 aaPredicted RBP6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 ATAD2BQ9ULI0 1458 aa6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 CFTRP13569 1480 aa6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 PCF11O94913 1555 aaKnown RBP6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 PTPN23Q9H3S7 1636 aa6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 ARID3CA6NKF2 412 aa6.03□□□□□ -1.44
DEPDC1-202ENST00000456315 PLEKHH1Q9ULM0 1364 aa6.02□□□□□ -1.45
DEPDC1-202ENST00000456315 ST20-MTHFSA0A0A6YYL1 179 aa6.02□□□□□ -1.45
DEPDC1-202ENST00000456315 PODXL2Q9NZ53 605 aa6.01□□□□□ -1.45
DEPDC1-202ENST00000456315 CHAMP1Q96JM3 812 aa6.01□□□□□ -1.45
DEPDC1-202ENST00000456315 RBM10P98175 930 aaKnown RBP6.01□□□□□ -1.45
DEPDC1-202ENST00000456315 AAMPQ13685 434 aa6.01□□□□□ -1.45
DEPDC1-202ENST00000456315 LRRIQ1Q96JM4 1722 aa6□□□□□ -1.45
DEPDC1-202ENST00000456315 MS4A1P11836 297 aa6□□□□□ -1.45
DEPDC1-202ENST00000456315 PPM1GO15355 546 aaPredicted RBP6□□□□□ -1.45
DEPDC1-202ENST00000456315 SPRYD3Q8NCJ5 442 aa6□□□□□ -1.45
DEPDC1-202ENST00000456315 AK9Q5TCS8 1911 aa6□□□□□ -1.45
DEPDC1-202ENST00000456315 BCAR3O75815 825 aa6□□□□□ -1.45
DEPDC1-202ENST00000456315 ZNF692Q9BU19 519 aaPredicted RBP6□□□□□ -1.45
DEPDC1-202ENST00000456315 RSPH6AQ9H0K4 717 aa6□□□□□ -1.45
DEPDC1-202ENST00000456315 CLCN1P35523 988 aa5.99□□□□□ -1.45
DEPDC1-202ENST00000456315 ZNF326Q5BKZ1 582 aaKnown RBP5.99□□□□□ -1.45
DEPDC1-202ENST00000456315 DUSP27Q5VZP5 1158 aa5.99□□□□□ -1.45
DEPDC1-202ENST00000456315 TMC1Q8TDI8 760 aa5.99□□□□□ -1.45
DEPDC1-202ENST00000456315 TSC1Q92574 1164 aa5.99□□□□□ -1.45
DEPDC1-202ENST00000456315 CEP350Q5VT06 3117 aa5.99□□□□□ -1.45
DEPDC1-202ENST00000456315 NBPF1Q3BBV0 1214 aa5.99□□□□□ -1.45
DEPDC1-202ENST00000456315 CARMIL1Q5VZK9 1371 aa5.99□□□□□ -1.45
DEPDC1-202ENST00000456315 TBC1D2Q9BYX2 928 aa5.98□□□□□ -1.45
DEPDC1-202ENST00000456315 KIF13AQ9H1H9 1805 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms