RNA–Protein interactions for RNA: ENST00000455987.5

SYCP1-203, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best)

Gene SYCP1, Length 2,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-203ENST00000455987 SETD1BQ9UPS6 1966 aaKnown RBP9.98□□□□□ -0.81
SYCP1-203ENST00000455987 MLECQ14165 292 aa9.97□□□□□ -0.81
SYCP1-203ENST00000455987 ATP10AO60312 1499 aa9.97□□□□□ -0.81
SYCP1-203ENST00000455987 SCAPERQ9BY12 1400 aa9.97□□□□□ -0.81
SYCP1-203ENST00000455987 STRCQ7RTU9 1775 aa9.97□□□□□ -0.81
SYCP1-203ENST00000455987 PLCH2O75038 1416 aa9.96□□□□□ -0.81
SYCP1-203ENST00000455987 C9orf84Q5VXU9 1444 aa9.96□□□□□ -0.81
SYCP1-203ENST00000455987 DISP3Q9P2K9 1392 aa9.95□□□□□ -0.82
SYCP1-203ENST00000455987 SOCS7O14512 581 aa9.95□□□□□ -0.82
SYCP1-203ENST00000455987 DMRT2Q9Y5R5 561 aa9.95□□□□□ -0.82
SYCP1-203ENST00000455987 MYO5CQ9NQX4 1742 aa9.94□□□□□ -0.82
SYCP1-203ENST00000455987 ILDR2Q71H61 639 aa9.94□□□□□ -0.82
SYCP1-203ENST00000455987 EEA1Q15075 1411 aa9.94□□□□□ -0.82
SYCP1-203ENST00000455987 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
SYCP1-203ENST00000455987 RANGAP1P46060 587 aaPredicted RBP9.93□□□□□ -0.82
SYCP1-203ENST00000455987 UHRF1BP1Q6BDS2 1440 aa9.92□□□□□ -0.82
SYCP1-203ENST00000455987 CEBPAP49715 358 aaPredicted RBP9.92□□□□□ -0.82
SYCP1-203ENST00000455987 KDM5CP41229 1560 aa9.92□□□□□ -0.82
SYCP1-203ENST00000455987 EFCAB2Q5VUJ9 269 aa9.91□□□□□ -0.82
SYCP1-203ENST00000455987 ZNF518AQ6AHZ1 1483 aa9.91□□□□□ -0.82
SYCP1-203ENST00000455987 SPATA31D1Q6ZQQ2 1576 aa9.91□□□□□ -0.82
SYCP1-203ENST00000455987 PTPRTO14522 1441 aa9.91□□□□□ -0.82
SYCP1-203ENST00000455987 REREQ9P2R6 1566 aa9.9□□□□□ -0.82
SYCP1-203ENST00000455987 DIP2CQ9Y2E4 1556 aa9.89□□□□□ -0.83
SYCP1-203ENST00000455987 C3P01024 1663 aa9.89□□□□□ -0.83
SYCP1-203ENST00000455987 KIF14Q15058 1648 aa9.88□□□□□ -0.83
SYCP1-203ENST00000455987 IQSEC2Q5JU85 1478 aa9.88□□□□□ -0.83
SYCP1-203ENST00000455987 LTBP4Q8N2S1 1624 aa9.88□□□□□ -0.83
SYCP1-203ENST00000455987 AGLP35573 1532 aa9.87□□□□□ -0.83
SYCP1-203ENST00000455987 ABCA6Q8N139 1617 aa9.87□□□□□ -0.83
SYCP1-203ENST00000455987 FMN1Q68DA7 1419 aa9.87□□□□□ -0.83
SYCP1-203ENST00000455987 ARHGAP5Q13017 1502 aa9.87□□□□□ -0.83
SYCP1-203ENST00000455987 CDK11AQ9UQ88 783 aaPredicted RBP9.86□□□□□ -0.83
SYCP1-203ENST00000455987 MLH3Q9UHC1 1453 aa9.86□□□□□ -0.83
SYCP1-203ENST00000455987 AFAP1Q8N556 730 aa9.86□□□□□ -0.83
SYCP1-203ENST00000455987 TROQ12816 1431 aaPredicted RBP9.86□□□□□ -0.83
SYCP1-203ENST00000455987 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
SYCP1-203ENST00000455987 CDC42BPBQ9Y5S2 1711 aa9.85□□□□□ -0.83
SYCP1-203ENST00000455987 NCOA1Q15788 1441 aa9.84□□□□□ -0.83
SYCP1-203ENST00000455987 CLIP1P30622 1438 aa9.84□□□□□ -0.83
SYCP1-203ENST00000455987 CNTLNQ9NXG0 1405 aa9.83□□□□□ -0.84
SYCP1-203ENST00000455987 ABCC1P33527 1531 aa9.82□□□□□ -0.84
SYCP1-203ENST00000455987 LRRIQ1Q96JM4 1722 aa9.82□□□□□ -0.84
SYCP1-203ENST00000455987 ITSN2Q9NZM3 1697 aa9.82□□□□□ -0.84
SYCP1-203ENST00000455987 PREX2Q70Z35 1606 aa9.82□□□□□ -0.84
SYCP1-203ENST00000455987 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
SYCP1-203ENST00000455987 MYT1LQ9UL68 1186 aa9.82□□□□□ -0.84
SYCP1-203ENST00000455987 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
SYCP1-203ENST00000455987 ARHGAP35Q9NRY4 1499 aa9.82□□□□□ -0.84
SYCP1-203ENST00000455987 KIDINS220Q9ULH0 1771 aa9.82□□□□□ -0.84
SYCP1-203ENST00000455987 MROH2AA6NES4 1674 aa9.81□□□□□ -0.84
SYCP1-203ENST00000455987 NPATQ14207 1427 aa9.81□□□□□ -0.84
SYCP1-203ENST00000455987 CAMSAP1Q5T5Y3 1602 aa9.8□□□□□ -0.84
SYCP1-203ENST00000455987 ZNF142P52746 1687 aaPredicted RBP9.78□□□□□ -0.84
SYCP1-203ENST00000455987 CDC42BPAQ5VT25 1732 aa9.78□□□□□ -0.84
SYCP1-203ENST00000455987 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
SYCP1-203ENST00000455987 PLA2R1Q13018 1463 aa9.76□□□□□ -0.85
SYCP1-203ENST00000455987 SAMD9LQ8IVG5 1584 aa9.76□□□□□ -0.85
SYCP1-203ENST00000455987 CCDC18Q5T9S5 1454 aa9.76□□□□□ -0.85
SYCP1-203ENST00000455987 ZMYM3Q14202 1370 aa9.76□□□□□ -0.85
SYCP1-203ENST00000455987 MYO3AQ8NEV4 1616 aa9.76□□□□□ -0.85
SYCP1-203ENST00000455987 SUPT6HQ7KZ85 1726 aaKnown RBP9.75□□□□□ -0.85
SYCP1-203ENST00000455987 UBAP1LF5GYI3 381 aa9.75□□□□□ -0.85
SYCP1-203ENST00000455987 ZNF335Q9H4Z2 1342 aaPredicted RBP9.75□□□□□ -0.85
SYCP1-203ENST00000455987 TCOF1Q13428 1488 aaKnown RBP9.75□□□□□ -0.85
SYCP1-203ENST00000455987 PKD2Q13563 968 aa9.74□□□□□ -0.85
SYCP1-203ENST00000455987 CLTCQ00610 1675 aaKnown RBP9.74□□□□□ -0.85
SYCP1-203ENST00000455987 NCKAP5LQ9HCH0 1330 aa9.74□□□□□ -0.85
SYCP1-203ENST00000455987 CEP170BQ9Y4F5 1589 aaPredicted RBP9.74□□□□□ -0.85
SYCP1-203ENST00000455987 CASKIN1Q8WXD9 1431 aa9.73□□□□□ -0.85
SYCP1-203ENST00000455987 PLXNC1O60486 1568 aa9.73□□□□□ -0.85
SYCP1-203ENST00000455987 SYCP2Q9BX26 1530 aa9.72□□□□□ -0.85
SYCP1-203ENST00000455987 ATP7AQ04656 1500 aa9.72□□□□□ -0.85
SYCP1-203ENST00000455987 PTPRKQ15262 1439 aa9.72□□□□□ -0.85
SYCP1-203ENST00000455987 INO80Q9ULG1 1556 aaPredicted RBP9.72□□□□□ -0.85
SYCP1-203ENST00000455987 SPAG9O60271 1321 aaKnown RBP9.71□□□□□ -0.85
SYCP1-203ENST00000455987 EHMT2Q96KQ7 1210 aa9.7□□□□□ -0.86
SYCP1-203ENST00000455987 A2MP01023 1474 aa9.7□□□□□ -0.86
SYCP1-203ENST00000455987 KIAA1107Q9UPP5 1409 aa9.7□□□□□ -0.86
SYCP1-203ENST00000455987 GPATCH8Q9UKJ3 1502 aaKnown RBP9.7□□□□□ -0.86
SYCP1-203ENST00000455987 MED1Q15648 1581 aaPredicted RBP9.69□□□□□ -0.86
SYCP1-203ENST00000455987 PLEKHH2Q8IVE3 1493 aa9.69□□□□□ -0.86
SYCP1-203ENST00000455987 PPP6R1Q9UPN7 881 aa9.69□□□□□ -0.86
SYCP1-203ENST00000455987 FYCO1Q9BQS8 1478 aa9.69□□□□□ -0.86
SYCP1-203ENST00000455987 ZNF777Q9ULD5 760 aaPredicted RBP9.69□□□□□ -0.86
SYCP1-203ENST00000455987 ADGBQ8N7X0 1667 aa9.68□□□□□ -0.86
SYCP1-203ENST00000455987 A2ML1A8K2U0 1454 aa9.68□□□□□ -0.86
SYCP1-203ENST00000455987 POLR1AO95602 1720 aaPredicted RBP9.68□□□□□ -0.86
SYCP1-203ENST00000455987 DNMT1P26358 1616 aaKnown RBP9.68□□□□□ -0.86
SYCP1-203ENST00000455987 HNRNPMP52272 730 aaKnown RBP eCLIP9.68□□□□□ -0.86
SYCP1-203ENST00000455987 CPS1P31327 1500 aa9.67□□□□□ -0.86
SYCP1-203ENST00000455987 HSPA1LP34931 641 aa9.66□□□□□ -0.86
SYCP1-203ENST00000455987 GGT6Q6P531 493 aa9.66□□□□□ -0.86
SYCP1-203ENST00000455987 NEURL4Q96JN8 1562 aa9.66□□□□□ -0.86
SYCP1-203ENST00000455987 TOM1O60784 492 aa9.65□□□□□ -0.87
SYCP1-203ENST00000455987 SHANK2Q9UPX8 1470 aa9.64□□□□□ -0.87
SYCP1-203ENST00000455987 CFDP1Q9UEE9 299 aaPredicted RBP9.64□□□□□ -0.87
SYCP1-203ENST00000455987 SCAF1Q9H7N4 1312 aaKnown RBP9.63□□□□□ -0.87
SYCP1-203ENST00000455987 FAM135AQ9P2D6 1515 aa9.63□□□□□ -0.87
SYCP1-203ENST00000455987 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms