RNA–Protein interactions for RNA: ENST00000455730.2

LDHBP1-201, Transcript of lactate dehydrogenase B pseudogene 1, humanhuman

BASIC

Gene LDHBP1, Length 1,119 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP1-201ENST00000455730 MAGI2Q86UL8 1455 aa23.82■■□□□ 1.4
LDHBP1-201ENST00000455730 DMRT2Q9Y5R5 561 aa23.81■■□□□ 1.4
LDHBP1-201ENST00000455730 HECW1Q76N89 1606 aa23.8■■□□□ 1.4
LDHBP1-201ENST00000455730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.79■■□□□ 1.4
LDHBP1-201ENST00000455730 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
LDHBP1-201ENST00000455730 PLEKHD1A6NEE1 506 aa23.78■■□□□ 1.4
LDHBP1-201ENST00000455730 CEBPAP49715 358 aaPredicted RBP23.77■■□□□ 1.4
LDHBP1-201ENST00000455730 UHRF1BP1Q6BDS2 1440 aa23.72■■□□□ 1.39
LDHBP1-201ENST00000455730 ATP10AO60312 1499 aa23.71■■□□□ 1.39
LDHBP1-201ENST00000455730 SETD1BQ9UPS6 1966 aaKnown RBP23.71■■□□□ 1.39
LDHBP1-201ENST00000455730 C9orf84Q5VXU9 1444 aa23.7■■□□□ 1.38
LDHBP1-201ENST00000455730 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.38
LDHBP1-201ENST00000455730 PTPRTO14522 1441 aa23.68■■□□□ 1.38
LDHBP1-201ENST00000455730 LTBP4Q8N2S1 1624 aa23.66■■□□□ 1.38
LDHBP1-201ENST00000455730 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
LDHBP1-201ENST00000455730 IQSEC2Q5JU85 1478 aa23.62■■□□□ 1.37
LDHBP1-201ENST00000455730 PLCH2O75038 1416 aa23.61■■□□□ 1.37
LDHBP1-201ENST00000455730 C3P01024 1663 aa23.56■■□□□ 1.36
LDHBP1-201ENST00000455730 CDK13Q14004 1512 aaKnown RBP23.55■■□□□ 1.36
LDHBP1-201ENST00000455730 EFCAB2Q5VUJ9 269 aa23.52■■□□□ 1.36
LDHBP1-201ENST00000455730 CSRNP3Q8WYN3 585 aa23.52■■□□□ 1.36
LDHBP1-201ENST00000455730 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
LDHBP1-201ENST00000455730 MYO5CQ9NQX4 1742 aa23.51■■□□□ 1.35
LDHBP1-201ENST00000455730 ZNF518AQ6AHZ1 1483 aa23.5■■□□□ 1.35
LDHBP1-201ENST00000455730 KDM5CP41229 1560 aa23.48■■□□□ 1.35
LDHBP1-201ENST00000455730 DIP2CQ9Y2E4 1556 aa23.48■■□□□ 1.35
LDHBP1-201ENST00000455730 AFAP1Q8N556 730 aa23.48■■□□□ 1.35
LDHBP1-201ENST00000455730 TRAPPC8Q9Y2L5 1435 aa23.48■■□□□ 1.35
LDHBP1-201ENST00000455730 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
LDHBP1-201ENST00000455730 REREQ9P2R6 1566 aa23.46■■□□□ 1.35
LDHBP1-201ENST00000455730 UBAP1LF5GYI3 381 aa23.45■■□□□ 1.34
LDHBP1-201ENST00000455730 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
LDHBP1-201ENST00000455730 ABCA6Q8N139 1617 aa23.43■■□□□ 1.34
LDHBP1-201ENST00000455730 CAMSAP1Q5T5Y3 1602 aa23.42■■□□□ 1.34
LDHBP1-201ENST00000455730 ZNF335Q9H4Z2 1342 aaPredicted RBP23.4■■□□□ 1.34
LDHBP1-201ENST00000455730 ARHGAP5Q13017 1502 aa23.4■■□□□ 1.34
LDHBP1-201ENST00000455730 KIF14Q15058 1648 aa23.4■■□□□ 1.34
LDHBP1-201ENST00000455730 AGLP35573 1532 aa23.39■■□□□ 1.34
LDHBP1-201ENST00000455730 MLH3Q9UHC1 1453 aa23.36■■□□□ 1.33
LDHBP1-201ENST00000455730 NCKAP5LQ9HCH0 1330 aa23.35■■□□□ 1.33
LDHBP1-201ENST00000455730 CNTLNQ9NXG0 1405 aa23.35■■□□□ 1.33
LDHBP1-201ENST00000455730 ATP1B4Q9UN42 357 aaPredicted RBP23.34■■□□□ 1.33
LDHBP1-201ENST00000455730 MED1Q15648 1581 aaPredicted RBP23.33■■□□□ 1.33
LDHBP1-201ENST00000455730 NPATQ14207 1427 aa23.32■■□□□ 1.32
LDHBP1-201ENST00000455730 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
LDHBP1-201ENST00000455730 TROQ12816 1431 aaPredicted RBP23.29■■□□□ 1.32
LDHBP1-201ENST00000455730 MROH2AA6NES4 1674 aa23.28■■□□□ 1.32
LDHBP1-201ENST00000455730 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
LDHBP1-201ENST00000455730 HSPA1LP34931 641 aa23.26■■□□□ 1.31
LDHBP1-201ENST00000455730 KIDINS220Q9ULH0 1771 aa23.26■■□□□ 1.31
LDHBP1-201ENST00000455730 ABCC1P33527 1531 aa23.25■■□□□ 1.31
LDHBP1-201ENST00000455730 ZMYM3Q14202 1370 aa23.25■■□□□ 1.31
LDHBP1-201ENST00000455730 CLIP1P30622 1438 aa23.25■■□□□ 1.31
LDHBP1-201ENST00000455730 EEA1Q15075 1411 aa23.25■■□□□ 1.31
LDHBP1-201ENST00000455730 PLA2R1Q13018 1463 aa23.24■■□□□ 1.31
LDHBP1-201ENST00000455730 PKD2Q13563 968 aa23.24■■□□□ 1.31
LDHBP1-201ENST00000455730 FMN1Q68DA7 1419 aa23.24■■□□□ 1.31
LDHBP1-201ENST00000455730 ITSN2Q9NZM3 1697 aa23.23■■□□□ 1.31
LDHBP1-201ENST00000455730 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
LDHBP1-201ENST00000455730 ZNF142P52746 1687 aaPredicted RBP23.22■■□□□ 1.31
LDHBP1-201ENST00000455730 SUPT6HQ7KZ85 1726 aaKnown RBP23.22■■□□□ 1.31
LDHBP1-201ENST00000455730 TCOF1Q13428 1488 aaKnown RBP23.22■■□□□ 1.31
LDHBP1-201ENST00000455730 MYO3AQ8NEV4 1616 aa23.22■■□□□ 1.31
LDHBP1-201ENST00000455730 PIP4K2BP78356 416 aa23.2■■□□□ 1.3
LDHBP1-201ENST00000455730 PREX2Q70Z35 1606 aa23.19■■□□□ 1.3
LDHBP1-201ENST00000455730 PPP6R1Q9UPN7 881 aa23.19■■□□□ 1.3
LDHBP1-201ENST00000455730 CEP170BQ9Y4F5 1589 aaPredicted RBP23.18■■□□□ 1.3
LDHBP1-201ENST00000455730 CLTCQ00610 1675 aaKnown RBP23.16■■□□□ 1.3
LDHBP1-201ENST00000455730 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
LDHBP1-201ENST00000455730 LRRIQ1Q96JM4 1722 aa23.15■■□□□ 1.3
LDHBP1-201ENST00000455730 TOM1O60784 492 aa23.14■■□□□ 1.29
LDHBP1-201ENST00000455730 PTPRKQ15262 1439 aa23.13■■□□□ 1.29
LDHBP1-201ENST00000455730 ARHGAP35Q9NRY4 1499 aa23.12■■□□□ 1.29
LDHBP1-201ENST00000455730 SAMD9LQ8IVG5 1584 aa23.11■■□□□ 1.29
LDHBP1-201ENST00000455730 CPS1P31327 1500 aa23.08■■□□□ 1.29
LDHBP1-201ENST00000455730 CDC42BPAQ5VT25 1732 aa23.07■■□□□ 1.28
LDHBP1-201ENST00000455730 SPAG9O60271 1321 aaKnown RBP23.05■■□□□ 1.28
LDHBP1-201ENST00000455730 PLXNC1O60486 1568 aa23.04■■□□□ 1.28
LDHBP1-201ENST00000455730 A2ML1A8K2U0 1454 aa23.04■■□□□ 1.28
LDHBP1-201ENST00000455730 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
LDHBP1-201ENST00000455730 DNMT1P26358 1616 aaKnown RBP23.04■■□□□ 1.28
LDHBP1-201ENST00000455730 SYCP2Q9BX26 1530 aa23.03■■□□□ 1.28
LDHBP1-201ENST00000455730 EHMT2Q96KQ7 1210 aa23.03■■□□□ 1.28
LDHBP1-201ENST00000455730 POLR1AO95602 1720 aaPredicted RBP23.02■■□□□ 1.28
LDHBP1-201ENST00000455730 UBTFP17480 764 aaKnown RBP23.02■■□□□ 1.28
LDHBP1-201ENST00000455730 GGT6Q6P531 493 aa23.02■■□□□ 1.28
LDHBP1-201ENST00000455730 ZNF777Q9ULD5 760 aaPredicted RBP23.02■■□□□ 1.28
LDHBP1-201ENST00000455730 NEURL4Q96JN8 1562 aa23.01■■□□□ 1.27
LDHBP1-201ENST00000455730 A2MP01023 1474 aa23.01■■□□□ 1.27
LDHBP1-201ENST00000455730 ATP7AQ04656 1500 aa23.01■■□□□ 1.27
LDHBP1-201ENST00000455730 ALKQ9UM73 1620 aa23■■□□□ 1.27
LDHBP1-201ENST00000455730 HNRNPMP52272 730 aaKnown RBP eCLIP22.98■■□□□ 1.27
LDHBP1-201ENST00000455730 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
LDHBP1-201ENST00000455730 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
LDHBP1-201ENST00000455730 VWDEQ8N2E2 1590 aa22.94■■□□□ 1.26
LDHBP1-201ENST00000455730 SENP3Q9H4L4 574 aaPredicted RBP22.94■■□□□ 1.26
LDHBP1-201ENST00000455730 GPATCH8Q9UKJ3 1502 aaKnown RBP22.91■■□□□ 1.26
LDHBP1-201ENST00000455730 CASKIN1Q8WXD9 1431 aa22.9■■□□□ 1.26
LDHBP1-201ENST00000455730 KIAA1107Q9UPP5 1409 aa22.9■■□□□ 1.26
LDHBP1-201ENST00000455730 TNRQ92752 1358 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms