RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 TULP1O00294 542 aaPredicted RBP12.89□□□□□ -0.35
LINC01940-201ENST00000455228 PPP4R2Q9NY27 417 aa12.89□□□□□ -0.35
LINC01940-201ENST00000455228 FAM9BQ8IZU0 186 aa12.88□□□□□ -0.35
LINC01940-201ENST00000455228 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
LINC01940-201ENST00000455228 RRP7BPQ9NSQ0 103 aa12.88□□□□□ -0.35
LINC01940-201ENST00000455228 BCCIPQ9P287 314 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC01940-201ENST00000455228 CHIC2Q9UKJ5 165 aa12.88□□□□□ -0.35
LINC01940-201ENST00000455228 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
LINC01940-201ENST00000455228 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
LINC01940-201ENST00000455228 IPO9Q96P70 1041 aaKnown RBP12.87□□□□□ -0.35
LINC01940-201ENST00000455228 AQRO60306 1485 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01940-201ENST00000455228 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
LINC01940-201ENST00000455228 PTPRKQ15262 1439 aa12.86□□□□□ -0.35
LINC01940-201ENST00000455228 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
LINC01940-201ENST00000455228 MRS2Q9HD23 443 aa12.85□□□□□ -0.35
LINC01940-201ENST00000455228 NAIPQ13075 1403 aa12.85□□□□□ -0.35
LINC01940-201ENST00000455228 RAD54L2Q9Y4B4 1467 aa12.84□□□□□ -0.35
LINC01940-201ENST00000455228 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
LINC01940-201ENST00000455228 BRPF3Q9ULD4 1205 aa12.84□□□□□ -0.35
LINC01940-201ENST00000455228 NBR1Q14596 966 aa12.83□□□□□ -0.36
LINC01940-201ENST00000455228 B4GALNT3Q6L9W6 998 aa12.83□□□□□ -0.36
LINC01940-201ENST00000455228 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
LINC01940-201ENST00000455228 NAP1L5Q96NT1 182 aaPredicted RBP12.83□□□□□ -0.36
LINC01940-201ENST00000455228 MYOM3Q5VTT5 1437 aa12.83□□□□□ -0.36
LINC01940-201ENST00000455228 FANCD2Q9BXW9 1451 aa12.82□□□□□ -0.36
LINC01940-201ENST00000455228 NCOA2Q15596 1464 aa12.81□□□□□ -0.36
LINC01940-201ENST00000455228 CCDC184Q52MB2 194 aa12.81□□□□□ -0.36
LINC01940-201ENST00000455228 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
LINC01940-201ENST00000455228 PRKRIP1Q9H875 184 aaPredicted RBP12.79□□□□□ -0.36
LINC01940-201ENST00000455228 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
LINC01940-201ENST00000455228 CNGB1Q14028 1251 aaPredicted RBP12.79□□□□□ -0.36
LINC01940-201ENST00000455228 NPM2Q86SE8 214 aaKnown RBP12.79□□□□□ -0.36
LINC01940-201ENST00000455228 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
LINC01940-201ENST00000455228 L3MBTL2Q969R5 705 aa12.78□□□□□ -0.36
LINC01940-201ENST00000455228 ABCA10Q8WWZ4 1543 aa12.78□□□□□ -0.36
LINC01940-201ENST00000455228 GSE1Q14687 1217 aa12.77□□□□□ -0.36
LINC01940-201ENST00000455228 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
LINC01940-201ENST00000455228 MPHOSPH9Q99550 1183 aa12.77□□□□□ -0.37
LINC01940-201ENST00000455228 FOXD1Q16676 465 aa12.76□□□□□ -0.37
LINC01940-201ENST00000455228 ZBED9Q6R2W3 1325 aa12.76□□□□□ -0.37
LINC01940-201ENST00000455228 POLA1P09884 1462 aaPredicted RBP12.76□□□□□ -0.37
LINC01940-201ENST00000455228 PDCL3Q9H2J4 239 aa12.76□□□□□ -0.37
LINC01940-201ENST00000455228 CTTNBP2Q8WZ74 1663 aa12.75□□□□□ -0.37
LINC01940-201ENST00000455228 PPM1GO15355 546 aaPredicted RBP12.75□□□□□ -0.37
LINC01940-201ENST00000455228 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
LINC01940-201ENST00000455228 POLR3GLQ9BT43 218 aa12.75□□□□□ -0.37
LINC01940-201ENST00000455228 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
LINC01940-201ENST00000455228 CUL7Q14999 1698 aa12.74□□□□□ -0.37
LINC01940-201ENST00000455228 CC2D2AQ9P2K1 1620 aa12.74□□□□□ -0.37
LINC01940-201ENST00000455228 DNMBPQ6XZF7 1577 aa12.74□□□□□ -0.37
LINC01940-201ENST00000455228 SUPT6HQ7KZ85 1726 aaKnown RBP12.74□□□□□ -0.37
LINC01940-201ENST00000455228 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
LINC01940-201ENST00000455228 TOPBP1Q92547 1522 aa12.73□□□□□ -0.37
LINC01940-201ENST00000455228 ARID3CA6NKF2 412 aa12.73□□□□□ -0.37
LINC01940-201ENST00000455228 KDM5BQ9UGL1 1544 aa12.73□□□□□ -0.37
LINC01940-201ENST00000455228 ARID4BQ4LE39 1312 aaPredicted RBP12.73□□□□□ -0.37
LINC01940-201ENST00000455228 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
LINC01940-201ENST00000455228 TDRD9Q8NDG6 1382 aaKnown RBP12.72□□□□□ -0.37
LINC01940-201ENST00000455228 EHBP1L1Q8N3D4 1523 aa12.72□□□□□ -0.37
LINC01940-201ENST00000455228 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
LINC01940-201ENST00000455228 DHX37Q8IY37 1157 aaKnown RBP12.71□□□□□ -0.37
LINC01940-201ENST00000455228 UTP14CQ5TAP6 766 aaKnown RBP12.7□□□□□ -0.38
LINC01940-201ENST00000455228 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
LINC01940-201ENST00000455228 HSP90B1P14625 803 aaKnown RBP12.7□□□□□ -0.38
LINC01940-201ENST00000455228 NCOA1Q15788 1441 aa12.69□□□□□ -0.38
LINC01940-201ENST00000455228 NEFMP07197 916 aa12.69□□□□□ -0.38
LINC01940-201ENST00000455228 ANP32AP39687 249 aaKnown RBP12.68□□□□□ -0.38
LINC01940-201ENST00000455228 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
LINC01940-201ENST00000455228 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
LINC01940-201ENST00000455228 CLCN1P35523 988 aa12.68□□□□□ -0.38
LINC01940-201ENST00000455228 SMAP1Q8IYB5 467 aaPredicted RBP12.68□□□□□ -0.38
LINC01940-201ENST00000455228 NBPF8Q3BBV2 869 aa12.67□□□□□ -0.38
LINC01940-201ENST00000455228 ZFP91Q96JP5 570 aaPredicted RBP12.67□□□□□ -0.38
LINC01940-201ENST00000455228 CHMP4BQ9H444 224 aaKnown RBP12.67□□□□□ -0.38
LINC01940-201ENST00000455228 UGGT2Q9NYU1 1516 aa12.67□□□□□ -0.38
LINC01940-201ENST00000455228 CANXP27824 592 aaKnown RBP12.67□□□□□ -0.38
LINC01940-201ENST00000455228 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
LINC01940-201ENST00000455228 ZBTB47Q9UFB7 747 aaPredicted RBP12.65□□□□□ -0.38
LINC01940-201ENST00000455228 THOC2Q8NI27 1593 aaKnown RBP12.65□□□□□ -0.38
LINC01940-201ENST00000455228 HECW1Q76N89 1606 aa12.65□□□□□ -0.38
LINC01940-201ENST00000455228 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
LINC01940-201ENST00000455228 RRAGDQ9NQL2 400 aaPredicted RBP12.65□□□□□ -0.38
LINC01940-201ENST00000455228 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
LINC01940-201ENST00000455228 SAMD9Q5K651 1589 aa12.64□□□□□ -0.39
LINC01940-201ENST00000455228 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
LINC01940-201ENST00000455228 MMP14P50281 582 aa12.64□□□□□ -0.39
LINC01940-201ENST00000455228 GAPVD1Q14C86 1478 aa12.64□□□□□ -0.39
LINC01940-201ENST00000455228 NESP48681 1621 aa12.64□□□□□ -0.39
LINC01940-201ENST00000455228 NUDCQ9Y266 331 aa12.64□□□□□ -0.39
LINC01940-201ENST00000455228 DENND4BO75064 1496 aaPredicted RBP12.64□□□□□ -0.39
LINC01940-201ENST00000455228 LRRIQ1Q96JM4 1722 aa12.63□□□□□ -0.39
LINC01940-201ENST00000455228 TMEM51Q9NW97 253 aa12.63□□□□□ -0.39
LINC01940-201ENST00000455228 AKNAQ7Z591 1439 aa12.63□□□□□ -0.39
LINC01940-201ENST00000455228 TCOF1Q13428 1488 aaKnown RBP12.63□□□□□ -0.39
LINC01940-201ENST00000455228 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
LINC01940-201ENST00000455228 GCC2Q8IWJ2 1684 aa12.62□□□□□ -0.39
LINC01940-201ENST00000455228 RGS3P49796 1198 aa12.62□□□□□ -0.39
LINC01940-201ENST00000455228 KDM6BO15054 1643 aa12.61□□□□□ -0.39
LINC01940-201ENST00000455228 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
LINC01940-201ENST00000455228 MAGI3Q5TCQ9 1506 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms