RNA–Protein interactions for RNA: ENST00000454838.6

CHID1-205, Transcript of chitinase domain containing 1, humanhuman

TSL 5 BASIC

Gene CHID1, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-205ENST00000454838 PTPN23Q9H3S7 1636 aa17.33■□□□□ 0.37
CHID1-205ENST00000454838 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.37
CHID1-205ENST00000454838 EIF4G2P78344 907 aaKnown RBP eCLIP17.32■□□□□ 0.368e-8■■■■■ 31.9
CHID1-205ENST00000454838 PRG4Q92954 1404 aaPredicted RBP17.32■□□□□ 0.36
CHID1-205ENST00000454838 EPRSP07814 1512 aaKnown RBP17.3■□□□□ 0.36
CHID1-205ENST00000454838 KDM6BO15054 1643 aa17.3■□□□□ 0.36
CHID1-205ENST00000454838 NBPF8Q3BBV2 869 aa17.29■□□□□ 0.36
CHID1-205ENST00000454838 MRS2Q9HD23 443 aa17.29■□□□□ 0.36
CHID1-205ENST00000454838 TIMELESSQ9UNS1 1208 aa17.29■□□□□ 0.36
CHID1-205ENST00000454838 KDM2AQ9Y2K7 1162 aa17.29■□□□□ 0.36
CHID1-205ENST00000454838 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
CHID1-205ENST00000454838 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
CHID1-205ENST00000454838 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
CHID1-205ENST00000454838 UGGT2Q9NYU1 1516 aa17.25■□□□□ 0.35
CHID1-205ENST00000454838 SUPT6HQ7KZ85 1726 aaKnown RBP17.25■□□□□ 0.35
CHID1-205ENST00000454838 SALL2Q9Y467 1007 aaPredicted RBP17.24■□□□□ 0.35
CHID1-205ENST00000454838 NUP160Q12769 1436 aa17.24■□□□□ 0.35
CHID1-205ENST00000454838 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
CHID1-205ENST00000454838 ERCC6L2Q5T890 1561 aa17.24■□□□□ 0.35
CHID1-205ENST00000454838 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
CHID1-205ENST00000454838 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
CHID1-205ENST00000454838 PTPRGP23470 1445 aa17.23■□□□□ 0.35
CHID1-205ENST00000454838 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
CHID1-205ENST00000454838 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
CHID1-205ENST00000454838 CDK11AQ9UQ88 783 aaPredicted RBP17.21■□□□□ 0.35
CHID1-205ENST00000454838 CHD1O14646 1710 aa17.2■□□□□ 0.34
CHID1-205ENST00000454838 EHBP1L1Q8N3D4 1523 aa17.2■□□□□ 0.34
CHID1-205ENST00000454838 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
CHID1-205ENST00000454838 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.18■□□□□ 0.346e-6■■■□□ 18
CHID1-205ENST00000454838 DENND4BO75064 1496 aaPredicted RBP17.16■□□□□ 0.34
CHID1-205ENST00000454838 PKD2Q13563 968 aa17.16■□□□□ 0.34
CHID1-205ENST00000454838 HECW1Q76N89 1606 aa17.15■□□□□ 0.34
CHID1-205ENST00000454838 HNRNPMP52272 730 aaKnown RBP eCLIP17.15■□□□□ 0.342e-7■■■■□ 25.4
CHID1-205ENST00000454838 PRKRIP1Q9H875 184 aaPredicted RBP17.13■□□□□ 0.33
CHID1-205ENST00000454838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHID1-205ENST00000454838 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
CHID1-205ENST00000454838 ANP32EQ9BTT0 268 aa17.13■□□□□ 0.33
CHID1-205ENST00000454838 RAPGEF6Q8TEU7 1601 aa17.12■□□□□ 0.33
CHID1-205ENST00000454838 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
CHID1-205ENST00000454838 KDM5BQ9UGL1 1544 aa17.1■□□□□ 0.33
CHID1-205ENST00000454838 CCDC7Q96M83 1385 aa17.1■□□□□ 0.33
CHID1-205ENST00000454838 ATP10BO94823 1461 aa17.1■□□□□ 0.33
CHID1-205ENST00000454838 DAPK1P53355 1430 aa17.09■□□□□ 0.33
CHID1-205ENST00000454838 ABCC5O15440 1437 aa17.08■□□□□ 0.32
CHID1-205ENST00000454838 ARHGEF11O15085 1522 aa17.07■□□□□ 0.32
CHID1-205ENST00000454838 KIF14Q15058 1648 aa17.06■□□□□ 0.32
CHID1-205ENST00000454838 CNTLNQ9NXG0 1405 aa17.06■□□□□ 0.32
CHID1-205ENST00000454838 ERICH6Q7L0X2 663 aa17.04■□□□□ 0.32
CHID1-205ENST00000454838 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
CHID1-205ENST00000454838 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
CHID1-205ENST00000454838 ANKRD30BQ9BXX2 1392 aa17.04■□□□□ 0.32
CHID1-205ENST00000454838 TROQ12816 1431 aaPredicted RBP17.03■□□□□ 0.32
CHID1-205ENST00000454838 CARD11Q9BXL7 1154 aa17.03■□□□□ 0.32
CHID1-205ENST00000454838 MSH5O43196 834 aa17.02■□□□□ 0.31
CHID1-205ENST00000454838 NUP155O75694 1391 aa17.01■□□□□ 0.31
CHID1-205ENST00000454838 MYT1LQ9UL68 1186 aa17.01■□□□□ 0.31
CHID1-205ENST00000454838 CYB5RLQ6IPT4 315 aa16.98■□□□□ 0.31
CHID1-205ENST00000454838 TMC1Q8TDI8 760 aa16.98■□□□□ 0.31
CHID1-205ENST00000454838 USP47Q96K76 1375 aa16.98■□□□□ 0.31
CHID1-205ENST00000454838 TCOF1Q13428 1488 aaKnown RBP16.98■□□□□ 0.31
CHID1-205ENST00000454838 ST20-MTHFSA0A0A6YYL1 179 aa16.98■□□□□ 0.31
CHID1-205ENST00000454838 GPATCH8Q9UKJ3 1502 aaKnown RBP16.97■□□□□ 0.31
CHID1-205ENST00000454838 AKNAQ7Z591 1439 aa16.97■□□□□ 0.31
CHID1-205ENST00000454838 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
CHID1-205ENST00000454838 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
CHID1-205ENST00000454838 MIA2Q96PC5 1412 aa16.97■□□□□ 0.31
CHID1-205ENST00000454838 NCOA1Q15788 1441 aa16.95■□□□□ 0.3
CHID1-205ENST00000454838 CAMSAP2Q08AD1 1489 aa16.95■□□□□ 0.3
CHID1-205ENST00000454838 RPRD2Q5VT52 1461 aaKnown RBP16.94■□□□□ 0.3
CHID1-205ENST00000454838 ABCA8O94911 1581 aa16.94■□□□□ 0.3
CHID1-205ENST00000454838 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
CHID1-205ENST00000454838 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
CHID1-205ENST00000454838 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
CHID1-205ENST00000454838 TEX14Q8IWB6 1497 aa16.91■□□□□ 0.3
CHID1-205ENST00000454838 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
CHID1-205ENST00000454838 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
CHID1-205ENST00000454838 PZPP20742 1482 aa16.89■□□□□ 0.29
CHID1-205ENST00000454838 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
CHID1-205ENST00000454838 ANKRD50Q9ULJ7 1429 aa16.89■□□□□ 0.29
CHID1-205ENST00000454838 NBPF1Q3BBV0 1214 aa16.88■□□□□ 0.29
CHID1-205ENST00000454838 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
CHID1-205ENST00000454838 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
CHID1-205ENST00000454838 NBR1Q14596 966 aa16.87■□□□□ 0.29
CHID1-205ENST00000454838 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
CHID1-205ENST00000454838 DNMT1P26358 1616 aaKnown RBP16.85■□□□□ 0.29
CHID1-205ENST00000454838 KIAA1107Q9UPP5 1409 aa16.84■□□□□ 0.29
CHID1-205ENST00000454838 NPM1P06748 294 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHID1-205ENST00000454838 ROCK1Q13464 1354 aa16.84■□□□□ 0.29
CHID1-205ENST00000454838 CLASP1Q7Z460 1538 aa16.83■□□□□ 0.28
CHID1-205ENST00000454838 SKAP1Q86WV1 359 aa16.83■□□□□ 0.28
CHID1-205ENST00000454838 ROCK2O75116 1388 aaKnown RBP16.82■□□□□ 0.28
CHID1-205ENST00000454838 KIF15Q9NS87 1388 aa16.82■□□□□ 0.28
CHID1-205ENST00000454838 ARHGAP5Q13017 1502 aa16.81■□□□□ 0.28
CHID1-205ENST00000454838 ABCC10Q5T3U5 1492 aa16.81■□□□□ 0.28
CHID1-205ENST00000454838 C9orf84Q5VXU9 1444 aa16.81■□□□□ 0.28
CHID1-205ENST00000454838 SPATA31E1Q6ZUB1 1445 aa16.8■□□□□ 0.28
CHID1-205ENST00000454838 PLIN1O60240 522 aa16.8■□□□□ 0.28
CHID1-205ENST00000454838 DHX29Q7Z478 1369 aaKnown RBP16.79■□□□□ 0.28
CHID1-205ENST00000454838 ABCC2Q92887 1545 aa16.79■□□□□ 0.28
CHID1-205ENST00000454838 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms