RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 CERKQ8TCT0 537 aa36.66■■■■□ 3.46
TNFRSF25-208ENST00000453341 SCAPERQ9BY12 1400 aa36.66■■■■□ 3.46
TNFRSF25-208ENST00000453341 PLCH2O75038 1416 aa36.63■■■■□ 3.45
TNFRSF25-208ENST00000453341 ARHGEF12Q9NZN5 1544 aa36.6■■■■□ 3.45
TNFRSF25-208ENST00000453341 ATP10AO60312 1499 aa36.56■■■■□ 3.44
TNFRSF25-208ENST00000453341 C9orf84Q5VXU9 1444 aa36.53■■■■□ 3.44
TNFRSF25-208ENST00000453341 PREX1Q8TCU6 1659 aa36.51■■■■□ 3.44
TNFRSF25-208ENST00000453341 MYO5CQ9NQX4 1742 aa36.48■■■■□ 3.43
TNFRSF25-208ENST00000453341 CEBPAP49715 358 aaPredicted RBP36.48■■■■□ 3.43
TNFRSF25-208ENST00000453341 EFCAB2Q5VUJ9 269 aa36.45■■■■□ 3.43
TNFRSF25-208ENST00000453341 KIF14Q15058 1648 aa36.42■■■■□ 3.42
TNFRSF25-208ENST00000453341 STRCQ7RTU9 1775 aa36.42■■■■□ 3.42
TNFRSF25-208ENST00000453341 ATP1B4Q9UN42 357 aaPredicted RBP36.38■■■■□ 3.41
TNFRSF25-208ENST00000453341 ZNF518AQ6AHZ1 1483 aa36.37■■■■□ 3.41
TNFRSF25-208ENST00000453341 KDM5CP41229 1560 aa36.37■■■■□ 3.41
TNFRSF25-208ENST00000453341 FMN1Q68DA7 1419 aa36.35■■■■□ 3.41
TNFRSF25-208ENST00000453341 AFAP1Q8N556 730 aa36.34■■■■□ 3.41
TNFRSF25-208ENST00000453341 ARHGAP35Q9NRY4 1499 aa36.32■■■■□ 3.41
TNFRSF25-208ENST00000453341 ARHGAP5Q13017 1502 aa36.32■■■■□ 3.4
TNFRSF25-208ENST00000453341 DIP2CQ9Y2E4 1556 aa36.32■■■■□ 3.4
TNFRSF25-208ENST00000453341 SETD1BQ9UPS6 1966 aaKnown RBP36.31■■■■□ 3.4
TNFRSF25-208ENST00000453341 UHRF1BP1Q6BDS2 1440 aa36.31■■■■□ 3.4
TNFRSF25-208ENST00000453341 TROQ12816 1431 aaPredicted RBP36.3■■■■□ 3.4
TNFRSF25-208ENST00000453341 CDK11AQ9UQ88 783 aaPredicted RBP36.29■■■■□ 3.4
TNFRSF25-208ENST00000453341 EHMT2Q96KQ7 1210 aa36.28■■■■□ 3.4
TNFRSF25-208ENST00000453341 DMRT2Q9Y5R5 561 aa36.28■■■■□ 3.4
TNFRSF25-208ENST00000453341 REREQ9P2R6 1566 aa36.25■■■■□ 3.39
TNFRSF25-208ENST00000453341 ILDR2Q71H61 639 aa36.25■■■■□ 3.39
TNFRSF25-208ENST00000453341 ABCA6Q8N139 1617 aa36.24■■■■□ 3.39
TNFRSF25-208ENST00000453341 LRRIQ1Q96JM4 1722 aa36.24■■■■□ 3.39
TNFRSF25-208ENST00000453341 DISP3Q9P2K9 1392 aa36.24■■■■□ 3.39
TNFRSF25-208ENST00000453341 UBTFP17480 764 aaKnown RBP36.22■■■■□ 3.39
TNFRSF25-208ENST00000453341 C3P01024 1663 aa36.22■■■■□ 3.39
TNFRSF25-208ENST00000453341 CDC42BPBQ9Y5S2 1711 aa36.21■■■■□ 3.39
TNFRSF25-208ENST00000453341 MYT1LQ9UL68 1186 aa36.2■■■■□ 3.39
TNFRSF25-208ENST00000453341 MLH3Q9UHC1 1453 aa36.18■■■■□ 3.38
TNFRSF25-208ENST00000453341 CLIP1P30622 1438 aa36.18■■■■□ 3.38
TNFRSF25-208ENST00000453341 PTPRTO14522 1441 aa36.16■■■■□ 3.38
TNFRSF25-208ENST00000453341 AGLP35573 1532 aa36.14■■■■□ 3.38
TNFRSF25-208ENST00000453341 TRAPPC8Q9Y2L5 1435 aa36.14■■■■□ 3.38
TNFRSF25-208ENST00000453341 ABCC1P33527 1531 aa36.12■■■■□ 3.37
TNFRSF25-208ENST00000453341 PREX2Q70Z35 1606 aa36.1■■■■□ 3.37
TNFRSF25-208ENST00000453341 ITSN2Q9NZM3 1697 aa36.08■■■■□ 3.37
TNFRSF25-208ENST00000453341 LTBP4Q8N2S1 1624 aa36.08■■■■□ 3.37
TNFRSF25-208ENST00000453341 SOCS7O14512 581 aa36.07■■■■□ 3.36
TNFRSF25-208ENST00000453341 KIDINS220Q9ULH0 1771 aa36.05■■■■□ 3.36
TNFRSF25-208ENST00000453341 ESF1Q9H501 851 aaKnown RBP36.03■■■■□ 3.36
TNFRSF25-208ENST00000453341 NCOA1Q15788 1441 aa36.02■■■■□ 3.36
TNFRSF25-208ENST00000453341 SPATA31D1Q6ZQQ2 1576 aa36.02■■■■□ 3.36
TNFRSF25-208ENST00000453341 CNTLNQ9NXG0 1405 aa35.98■■■■□ 3.35
TNFRSF25-208ENST00000453341 CDC42BPAQ5VT25 1732 aa35.96■■■■□ 3.35
TNFRSF25-208ENST00000453341 IQSEC2Q5JU85 1478 aa35.93■■■■□ 3.34
TNFRSF25-208ENST00000453341 CCDC18Q5T9S5 1454 aa35.92■■■■□ 3.34
TNFRSF25-208ENST00000453341 CASKIN1Q8WXD9 1431 aa35.92■■■■□ 3.34
TNFRSF25-208ENST00000453341 SAMD9LQ8IVG5 1584 aa35.91■■■■□ 3.34
TNFRSF25-208ENST00000453341 CAMSAP1Q5T5Y3 1602 aa35.9■■■■□ 3.34
TNFRSF25-208ENST00000453341 MROH2AA6NES4 1674 aa35.89■■■■□ 3.34
TNFRSF25-208ENST00000453341 NPATQ14207 1427 aa35.88■■■■□ 3.33
TNFRSF25-208ENST00000453341 ZMYM3Q14202 1370 aa35.84■■■■□ 3.33
TNFRSF25-208ENST00000453341 SYCP2Q9BX26 1530 aa35.83■■■■□ 3.33
TNFRSF25-208ENST00000453341 SUPT6HQ7KZ85 1726 aaKnown RBP35.81■■■■□ 3.32
TNFRSF25-208ENST00000453341 ZNF777Q9ULD5 760 aaPredicted RBP35.8■■■■□ 3.32
TNFRSF25-208ENST00000453341 NCKAP5LQ9HCH0 1330 aa35.8■■■■□ 3.32
TNFRSF25-208ENST00000453341 SPAG9O60271 1321 aaKnown RBP35.77■■■■□ 3.32
TNFRSF25-208ENST00000453341 GPATCH8Q9UKJ3 1502 aaKnown RBP35.76■■■■□ 3.31
TNFRSF25-208ENST00000453341 ZNF335Q9H4Z2 1342 aaPredicted RBP35.76■■■■□ 3.31
TNFRSF25-208ENST00000453341 CLTCQ00610 1675 aaKnown RBP35.75■■■■□ 3.31
TNFRSF25-208ENST00000453341 HNRNPMP52272 730 aaKnown RBP eCLIP35.74■■■■□ 3.31
TNFRSF25-208ENST00000453341 FYCO1Q9BQS8 1478 aa35.73■■■■□ 3.31
TNFRSF25-208ENST00000453341 PLXNC1O60486 1568 aa35.73■■■■□ 3.31
TNFRSF25-208ENST00000453341 MYO3AQ8NEV4 1616 aa35.73■■■■□ 3.31
TNFRSF25-208ENST00000453341 ZNF142P52746 1687 aaPredicted RBP35.73■■■■□ 3.31
TNFRSF25-208ENST00000453341 CHIC1Q5VXU3 224 aa35.73■■■■□ 3.31
TNFRSF25-208ENST00000453341 ATP7AQ04656 1500 aa35.73■■■■□ 3.31
TNFRSF25-208ENST00000453341 INO80Q9ULG1 1556 aaPredicted RBP35.7■■■■□ 3.31
TNFRSF25-208ENST00000453341 PLA2R1Q13018 1463 aa35.69■■■■□ 3.3
TNFRSF25-208ENST00000453341 PTPRKQ15262 1439 aa35.69■■■■□ 3.3
TNFRSF25-208ENST00000453341 CEP170BQ9Y4F5 1589 aaPredicted RBP35.67■■■■□ 3.3
TNFRSF25-208ENST00000453341 A2MP01023 1474 aa35.67■■■■□ 3.3
TNFRSF25-208ENST00000453341 UBAP1LF5GYI3 381 aa35.66■■■■□ 3.3
TNFRSF25-208ENST00000453341 TCOF1Q13428 1488 aaKnown RBP35.66■■■■□ 3.3
TNFRSF25-208ENST00000453341 KIAA1107Q9UPP5 1409 aa35.66■■■■□ 3.3
TNFRSF25-208ENST00000453341 PKD2Q13563 968 aa35.63■■■■□ 3.29
TNFRSF25-208ENST00000453341 PLEKHH2Q8IVE3 1493 aa35.6■■■■□ 3.29
TNFRSF25-208ENST00000453341 GGT6Q6P531 493 aa35.59■■■■□ 3.29
TNFRSF25-208ENST00000453341 CFDP1Q9UEE9 299 aaPredicted RBP35.59■■■■□ 3.29
TNFRSF25-208ENST00000453341 CCNB3Q8WWL7 1395 aa35.53■■■■□ 3.28
TNFRSF25-208ENST00000453341 PPP6R1Q9UPN7 881 aa35.52■■■■□ 3.28
TNFRSF25-208ENST00000453341 ADGBQ8N7X0 1667 aa35.52■■■■□ 3.28
TNFRSF25-208ENST00000453341 DNMT1P26358 1616 aaKnown RBP35.49■■■■□ 3.27
TNFRSF25-208ENST00000453341 A2ML1A8K2U0 1454 aa35.48■■■■□ 3.27
TNFRSF25-208ENST00000453341 ZNF644Q9H582 1327 aaPredicted RBP35.46■■■■□ 3.27
TNFRSF25-208ENST00000453341 MBD5Q9P267 1494 aa35.42■■■■□ 3.26
TNFRSF25-208ENST00000453341 TIAM1Q13009 1591 aa35.42■■■■□ 3.26
TNFRSF25-208ENST00000453341 MTUS2Q5JR59 1369 aa35.41■■■■□ 3.26
TNFRSF25-208ENST00000453341 NEURL4Q96JN8 1562 aa35.39■■■■□ 3.26
TNFRSF25-208ENST00000453341 POLR1AO95602 1720 aaPredicted RBP35.38■■■■□ 3.25
TNFRSF25-208ENST00000453341 RTEL1-TNFRSF6BF6WH68 1400 aa35.35■■■■□ 3.25
TNFRSF25-208ENST00000453341 HSPA1LP34931 641 aa35.35■■■■□ 3.25
TNFRSF25-208ENST00000453341 FBXO31Q5XUX0 539 aaPredicted RBP35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms