RNA–Protein interactions for RNA: ENST00000451422.1

ANKRD28-204, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 2,485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-204ENST00000451422 MIA2Q96PC5 1412 aa10.64□□□□□ -0.71
ANKRD28-204ENST00000451422 NUP153P49790 1475 aaKnown RBP10.64□□□□□ -0.71
ANKRD28-204ENST00000451422 PHF23Q9BUL5 403 aaPredicted RBP10.64□□□□□ -0.71
ANKRD28-204ENST00000451422 KDM5BQ9UGL1 1544 aa10.63□□□□□ -0.71
ANKRD28-204ENST00000451422 GCC2Q8IWJ2 1684 aa10.63□□□□□ -0.71
ANKRD28-204ENST00000451422 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
ANKRD28-204ENST00000451422 ZNF777Q9ULD5 760 aaPredicted RBP10.62□□□□□ -0.71
ANKRD28-204ENST00000451422 CDK11AQ9UQ88 783 aaPredicted RBP10.62□□□□□ -0.71
ANKRD28-204ENST00000451422 SYNJ2O15056 1496 aa10.62□□□□□ -0.71
ANKRD28-204ENST00000451422 DAPK1P53355 1430 aa10.61□□□□□ -0.71
ANKRD28-204ENST00000451422 PRG4Q92954 1404 aaPredicted RBP10.61□□□□□ -0.71
ANKRD28-204ENST00000451422 PLB1Q6P1J6 1458 aa10.6□□□□□ -0.71
ANKRD28-204ENST00000451422 RAPGEF6Q8TEU7 1601 aa10.6□□□□□ -0.71
ANKRD28-204ENST00000451422 HSPA5P11021 654 aaKnown RBP10.6□□□□□ -0.71
ANKRD28-204ENST00000451422 L3MBTL2Q969R5 705 aa10.6□□□□□ -0.71
ANKRD28-204ENST00000451422 ABCC5O15440 1437 aa10.6□□□□□ -0.71
ANKRD28-204ENST00000451422 AKNAQ7Z591 1439 aa10.6□□□□□ -0.71
ANKRD28-204ENST00000451422 CCER2I3L3R5 266 aa10.59□□□□□ -0.71
ANKRD28-204ENST00000451422 BCANQ96GW7 911 aa10.59□□□□□ -0.71
ANKRD28-204ENST00000451422 CFDP1Q9UEE9 299 aaPredicted RBP10.59□□□□□ -0.71
ANKRD28-204ENST00000451422 CEP170Q5SW79 1584 aa10.58□□□□□ -0.72
ANKRD28-204ENST00000451422 SLC4A1APQ9BWU0 796 aaKnown RBP10.58□□□□□ -0.72
ANKRD28-204ENST00000451422 JPH4Q96JJ6 628 aa10.58□□□□□ -0.72
ANKRD28-204ENST00000451422 WASHC2AQ641Q2 1341 aa10.57□□□□□ -0.72
ANKRD28-204ENST00000451422 CYB5RLQ6IPT4 315 aa10.57□□□□□ -0.72
ANKRD28-204ENST00000451422 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.726e-8■■■■■ 27.4
ANKRD28-204ENST00000451422 DNMT1P26358 1616 aaKnown RBP10.56□□□□□ -0.72
ANKRD28-204ENST00000451422 ROCK1Q13464 1354 aa10.56□□□□□ -0.72
ANKRD28-204ENST00000451422 TROQ12816 1431 aaPredicted RBP10.56□□□□□ -0.72
ANKRD28-204ENST00000451422 FKBP8Q14318 412 aa10.55□□□□□ -0.72
ANKRD28-204ENST00000451422 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
ANKRD28-204ENST00000451422 CAMSAP2Q08AD1 1489 aa10.54□□□□□ -0.72
ANKRD28-204ENST00000451422 NBPF8Q3BBV2 869 aa10.54□□□□□ -0.72
ANKRD28-204ENST00000451422 KIF14Q15058 1648 aa10.54□□□□□ -0.72
ANKRD28-204ENST00000451422 CARMIL2Q6F5E8 1435 aa10.53□□□□□ -0.72
ANKRD28-204ENST00000451422 C11orf95C9JLR9 678 aaPredicted RBP10.53□□□□□ -0.72
ANKRD28-204ENST00000451422 GPATCH8Q9UKJ3 1502 aaKnown RBP10.53□□□□□ -0.72
ANKRD28-204ENST00000451422 NUP160Q12769 1436 aa10.51□□□□□ -0.73
ANKRD28-204ENST00000451422 PLEKHD1A6NEE1 506 aa10.51□□□□□ -0.73
ANKRD28-204ENST00000451422 SHROOM2Q13796 1616 aa10.51□□□□□ -0.73
ANKRD28-204ENST00000451422 RPRD2Q5VT52 1461 aaKnown RBP10.51□□□□□ -0.73
ANKRD28-204ENST00000451422 NCOA1Q15788 1441 aa10.5□□□□□ -0.73
ANKRD28-204ENST00000451422 ZNF326Q5BKZ1 582 aaKnown RBP10.5□□□□□ -0.73
ANKRD28-204ENST00000451422 HNRNPUQ00839 825 aaKnown RBP eCLIP10.49□□□□□ -0.73
ANKRD28-204ENST00000451422 PZPP20742 1482 aa10.49□□□□□ -0.73
ANKRD28-204ENST00000451422 TEX14Q8IWB6 1497 aa10.49□□□□□ -0.73
ANKRD28-204ENST00000451422 PKD2Q13563 968 aa10.48□□□□□ -0.73
ANKRD28-204ENST00000451422 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
ANKRD28-204ENST00000451422 NEFLP07196 543 aa10.48□□□□□ -0.73
ANKRD28-204ENST00000451422 ITSN2Q9NZM3 1697 aa10.47□□□□□ -0.73
ANKRD28-204ENST00000451422 CNGB1Q14028 1251 aaPredicted RBP10.47□□□□□ -0.73
ANKRD28-204ENST00000451422 CCDC7Q96M83 1385 aa10.47□□□□□ -0.73
ANKRD28-204ENST00000451422 ANKRD30AQ9BXX3 1397 aa10.47□□□□□ -0.73
ANKRD28-204ENST00000451422 ATP10BO94823 1461 aa10.46□□□□□ -0.73
ANKRD28-204ENST00000451422 TSHZ2Q9NRE2 1034 aa10.46□□□□□ -0.73
ANKRD28-204ENST00000451422 CNTLNQ9NXG0 1405 aa10.46□□□□□ -0.74
ANKRD28-204ENST00000451422 HNRNPMP52272 730 aaKnown RBP eCLIP10.46□□□□□ -0.742e-7■■■□□ 18.1
ANKRD28-204ENST00000451422 POLR3GLQ9BT43 218 aa10.46□□□□□ -0.74
ANKRD28-204ENST00000451422 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.74
ANKRD28-204ENST00000451422 ERCC6L2Q5T890 1561 aa10.45□□□□□ -0.74
ANKRD28-204ENST00000451422 ANKRD50Q9ULJ7 1429 aa10.45□□□□□ -0.74
ANKRD28-204ENST00000451422 ADCY10Q96PN6 1610 aa10.45□□□□□ -0.74
ANKRD28-204ENST00000451422 KIF7Q2M1P5 1343 aa10.44□□□□□ -0.74
ANKRD28-204ENST00000451422 ABCA8O94911 1581 aa10.44□□□□□ -0.74
ANKRD28-204ENST00000451422 KIAA1107Q9UPP5 1409 aa10.44□□□□□ -0.74
ANKRD28-204ENST00000451422 ADGBQ8N7X0 1667 aa10.44□□□□□ -0.74
ANKRD28-204ENST00000451422 NUP155O75694 1391 aa10.44□□□□□ -0.74
ANKRD28-204ENST00000451422 FAM9BQ8IZU0 186 aa10.44□□□□□ -0.74
ANKRD28-204ENST00000451422 TSPY4P0CV99 314 aa10.43□□□□□ -0.74
ANKRD28-204ENST00000451422 TSPY10P0CW01 314 aa10.43□□□□□ -0.74
ANKRD28-204ENST00000451422 PRKRIP1Q9H875 184 aaPredicted RBP10.43□□□□□ -0.74
ANKRD28-204ENST00000451422 ADGRL2O95490 1459 aa10.43□□□□□ -0.74
ANKRD28-204ENST00000451422 PTPRGP23470 1445 aa10.43□□□□□ -0.74
ANKRD28-204ENST00000451422 C9orf84Q5VXU9 1444 aa10.43□□□□□ -0.74
ANKRD28-204ENST00000451422 CDC42BPAQ5VT25 1732 aa10.43□□□□□ -0.74
ANKRD28-204ENST00000451422 ABCC10Q5T3U5 1492 aa10.42□□□□□ -0.74
ANKRD28-204ENST00000451422 CROCC2H7BZ55 1655 aa10.42□□□□□ -0.74
ANKRD28-204ENST00000451422 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
ANKRD28-204ENST00000451422 SPATA31E1Q6ZUB1 1445 aa10.42□□□□□ -0.74
ANKRD28-204ENST00000451422 MRS2Q9HD23 443 aa10.42□□□□□ -0.74
ANKRD28-204ENST00000451422 KDM2AQ9Y2K7 1162 aa10.41□□□□□ -0.74
ANKRD28-204ENST00000451422 TRHP20396 242 aaPredicted RBP10.4□□□□□ -0.74
ANKRD28-204ENST00000451422 KIF15Q9NS87 1388 aa10.39□□□□□ -0.75
ANKRD28-204ENST00000451422 USP47Q96K76 1375 aa10.39□□□□□ -0.75
ANKRD28-204ENST00000451422 MBD5Q9P267 1494 aa10.38□□□□□ -0.75
ANKRD28-204ENST00000451422 SHANK2Q9UPX8 1470 aa10.36□□□□□ -0.75
ANKRD28-204ENST00000451422 DCAF11Q8TEB1 546 aa10.36□□□□□ -0.75
ANKRD28-204ENST00000451422 CARD11Q9BXL7 1154 aa10.36□□□□□ -0.75
ANKRD28-204ENST00000451422 KIF13AQ9H1H9 1805 aa10.36□□□□□ -0.75
ANKRD28-204ENST00000451422 SENP3-EIF4A1A0A087X0R7 540 aa10.35□□□□□ -0.75
ANKRD28-204ENST00000451422 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.35□□□□□ -0.75
ANKRD28-204ENST00000451422 BCORL1Q5H9F3 1711 aa10.35□□□□□ -0.75
ANKRD28-204ENST00000451422 SAMD9LQ8IVG5 1584 aa10.34□□□□□ -0.75
ANKRD28-204ENST00000451422 CCDC141Q6ZP82 1450 aa10.33□□□□□ -0.76
ANKRD28-204ENST00000451422 RGL3Q3MIN7 710 aa10.33□□□□□ -0.76
ANKRD28-204ENST00000451422 CDC42BPBQ9Y5S2 1711 aa10.33□□□□□ -0.76
ANKRD28-204ENST00000451422 ST20-MTHFSA0A0A6YYL1 179 aa10.32□□□□□ -0.76
ANKRD28-204ENST00000451422 DHX29Q7Z478 1369 aaKnown RBP10.32□□□□□ -0.76
ANKRD28-204ENST00000451422 ARHGAP5Q13017 1502 aa10.32□□□□□ -0.76
ANKRD28-204ENST00000451422 SYCP2Q9BX26 1530 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms