RNA–Protein interactions for RNA: ENST00000450297.1

SPTLC3-204, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-204ENST00000450297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.98■□□□□ 0.15
SPTLC3-204ENST00000450297 ARHGEF40Q8TER5 1519 aa15.97■□□□□ 0.15
SPTLC3-204ENST00000450297 CDK13Q14004 1512 aaKnown RBP15.96■□□□□ 0.15
SPTLC3-204ENST00000450297 MYT1LQ9UL68 1186 aa15.96■□□□□ 0.15
SPTLC3-204ENST00000450297 CDK11AQ9UQ88 783 aaPredicted RBP15.96■□□□□ 0.15
SPTLC3-204ENST00000450297 PCF11O94913 1555 aaKnown RBP15.96■□□□□ 0.14
SPTLC3-204ENST00000450297 CFAP74Q9C0B2 1584 aa15.96■□□□□ 0.14
SPTLC3-204ENST00000450297 SCAPERQ9BY12 1400 aa15.95■□□□□ 0.14
SPTLC3-204ENST00000450297 YEATS2Q9ULM3 1422 aa15.95■□□□□ 0.14
SPTLC3-204ENST00000450297 ZFYVE16Q7Z3T8 1539 aa15.95■□□□□ 0.14
SPTLC3-204ENST00000450297 EFCAB2Q5VUJ9 269 aa15.95■□□□□ 0.14
SPTLC3-204ENST00000450297 LMTK3Q96Q04 1460 aa15.94■□□□□ 0.14
SPTLC3-204ENST00000450297 TTC37Q6PGP7 1564 aa15.94■□□□□ 0.14
SPTLC3-204ENST00000450297 RIMS1Q86UR5 1692 aaKnown RBP15.93■□□□□ 0.14
SPTLC3-204ENST00000450297 PLCH2O75038 1416 aa15.92■□□□□ 0.14
SPTLC3-204ENST00000450297 MAGI2Q86UL8 1455 aa15.91■□□□□ 0.14
SPTLC3-204ENST00000450297 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
SPTLC3-204ENST00000450297 FMN1Q68DA7 1419 aa15.91■□□□□ 0.14
SPTLC3-204ENST00000450297 ZMYM4Q5VZL5 1548 aa15.89■□□□□ 0.13
SPTLC3-204ENST00000450297 HECW1Q76N89 1606 aa15.88■□□□□ 0.13
SPTLC3-204ENST00000450297 ATP10AO60312 1499 aa15.86■□□□□ 0.13
SPTLC3-204ENST00000450297 AFAP1Q8N556 730 aa15.86■□□□□ 0.13
SPTLC3-204ENST00000450297 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
SPTLC3-204ENST00000450297 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
SPTLC3-204ENST00000450297 CLIP1P30622 1438 aa15.85■□□□□ 0.13
SPTLC3-204ENST00000450297 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
SPTLC3-204ENST00000450297 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
SPTLC3-204ENST00000450297 CERKQ8TCT0 537 aa15.83■□□□□ 0.12
SPTLC3-204ENST00000450297 ARHGAP5Q13017 1502 aa15.83■□□□□ 0.12
SPTLC3-204ENST00000450297 ESF1Q9H501 851 aaKnown RBP15.82■□□□□ 0.12
SPTLC3-204ENST00000450297 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
SPTLC3-204ENST00000450297 SIGLEC1Q9BZZ2 1709 aa15.8■□□□□ 0.12
SPTLC3-204ENST00000450297 KIF14Q15058 1648 aa15.79■□□□□ 0.12
SPTLC3-204ENST00000450297 ZNF518AQ6AHZ1 1483 aa15.79■□□□□ 0.12
SPTLC3-204ENST00000450297 FER1L4A9Z1Z3 1794 aa15.78■□□□□ 0.12
SPTLC3-204ENST00000450297 MYO5CQ9NQX4 1742 aa15.78■□□□□ 0.12
SPTLC3-204ENST00000450297 ARHGEF12Q9NZN5 1544 aa15.77■□□□□ 0.11
SPTLC3-204ENST00000450297 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
SPTLC3-204ENST00000450297 HOXD11P31277 338 aaPredicted RBP15.75■□□□□ 0.11
SPTLC3-204ENST00000450297 UHRF1BP1Q6BDS2 1440 aa15.74■□□□□ 0.11
SPTLC3-204ENST00000450297 TRAPPC8Q9Y2L5 1435 aa15.7■□□□□ 0.1
SPTLC3-204ENST00000450297 KDM5CP41229 1560 aa15.7■□□□□ 0.1
SPTLC3-204ENST00000450297 CASKIN1Q8WXD9 1431 aa15.69■□□□□ 0.1
SPTLC3-204ENST00000450297 CCDC18Q5T9S5 1454 aa15.69■□□□□ 0.1
SPTLC3-204ENST00000450297 MLH3Q9UHC1 1453 aa15.69■□□□□ 0.1
SPTLC3-204ENST00000450297 PREX1Q8TCU6 1659 aa15.68■□□□□ 0.1
SPTLC3-204ENST00000450297 DIP2CQ9Y2E4 1556 aa15.68■□□□□ 0.1
SPTLC3-204ENST00000450297 RNF216Q9NWF9 866 aaPredicted RBP15.67■□□□□ 0.1
SPTLC3-204ENST00000450297 SPAG9O60271 1321 aaKnown RBP15.66■□□□□ 0.1
SPTLC3-204ENST00000450297 HNRNPMP52272 730 aaKnown RBP eCLIP15.65■□□□□ 0.1
SPTLC3-204ENST00000450297 ABCC1P33527 1531 aa15.64■□□□□ 0.09
SPTLC3-204ENST00000450297 ABCA6Q8N139 1617 aa15.64■□□□□ 0.09
SPTLC3-204ENST00000450297 CFDP1Q9UEE9 299 aaPredicted RBP15.63■□□□□ 0.09
SPTLC3-204ENST00000450297 PREX2Q70Z35 1606 aa15.63■□□□□ 0.09
SPTLC3-204ENST00000450297 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
SPTLC3-204ENST00000450297 REREQ9P2R6 1566 aa15.62■□□□□ 0.09
SPTLC3-204ENST00000450297 CNTLNQ9NXG0 1405 aa15.62■□□□□ 0.09
SPTLC3-204ENST00000450297 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
SPTLC3-204ENST00000450297 LRRIQ1Q96JM4 1722 aa15.62■□□□□ 0.09
SPTLC3-204ENST00000450297 AGLP35573 1532 aa15.62■□□□□ 0.09
SPTLC3-204ENST00000450297 DISP3Q9P2K9 1392 aa15.61■□□□□ 0.09
SPTLC3-204ENST00000450297 FYCO1Q9BQS8 1478 aa15.6■□□□□ 0.09
SPTLC3-204ENST00000450297 CCNB3Q8WWL7 1395 aa15.6■□□□□ 0.09
SPTLC3-204ENST00000450297 PTPRTO14522 1441 aa15.6■□□□□ 0.09
SPTLC3-204ENST00000450297 GGT6Q6P531 493 aa15.59■□□□□ 0.09
SPTLC3-204ENST00000450297 ITSN2Q9NZM3 1697 aa15.58■□□□□ 0.08
SPTLC3-204ENST00000450297 ZMYM3Q14202 1370 aa15.58■□□□□ 0.08
SPTLC3-204ENST00000450297 GPATCH8Q9UKJ3 1502 aaKnown RBP15.58■□□□□ 0.08
SPTLC3-204ENST00000450297 C3P01024 1663 aa15.57■□□□□ 0.08
SPTLC3-204ENST00000450297 STRCQ7RTU9 1775 aa15.57■□□□□ 0.08
SPTLC3-204ENST00000450297 MTUS2Q5JR59 1369 aa15.57■□□□□ 0.08
SPTLC3-204ENST00000450297 SYCP2Q9BX26 1530 aa15.57■□□□□ 0.08
SPTLC3-204ENST00000450297 DCAF8L1A6NGE4 600 aa15.56■□□□□ 0.08
SPTLC3-204ENST00000450297 NCKAP5LQ9HCH0 1330 aa15.56■□□□□ 0.08
SPTLC3-204ENST00000450297 SAMD9LQ8IVG5 1584 aa15.56■□□□□ 0.08
SPTLC3-204ENST00000450297 KIDINS220Q9ULH0 1771 aa15.55■□□□□ 0.08
SPTLC3-204ENST00000450297 SETD1BQ9UPS6 1966 aaKnown RBP15.55■□□□□ 0.08
SPTLC3-204ENST00000450297 PLEKHH2Q8IVE3 1493 aa15.54■□□□□ 0.08
SPTLC3-204ENST00000450297 NCOA1Q15788 1441 aa15.54■□□□□ 0.08
SPTLC3-204ENST00000450297 CDC42BPAQ5VT25 1732 aa15.54■□□□□ 0.08
SPTLC3-204ENST00000450297 NPATQ14207 1427 aa15.53■□□□□ 0.08
SPTLC3-204ENST00000450297 A2MP01023 1474 aa15.52■□□□□ 0.08
SPTLC3-204ENST00000450297 KIAA1107Q9UPP5 1409 aa15.52■□□□□ 0.08
SPTLC3-204ENST00000450297 ZNF644Q9H582 1327 aaPredicted RBP15.51■□□□□ 0.07
SPTLC3-204ENST00000450297 ATP7AQ04656 1500 aa15.51■□□□□ 0.07
SPTLC3-204ENST00000450297 CAMSAP1Q5T5Y3 1602 aa15.5■□□□□ 0.07
SPTLC3-204ENST00000450297 ILDR2Q71H61 639 aa15.5■□□□□ 0.07
SPTLC3-204ENST00000450297 SUPT6HQ7KZ85 1726 aaKnown RBP15.49■□□□□ 0.07
SPTLC3-204ENST00000450297 UBAP1LF5GYI3 381 aa15.49■□□□□ 0.07
SPTLC3-204ENST00000450297 ZNF335Q9H4Z2 1342 aaPredicted RBP15.48■□□□□ 0.07
SPTLC3-204ENST00000450297 PKD2Q13563 968 aa15.48■□□□□ 0.07
SPTLC3-204ENST00000450297 LTBP4Q8N2S1 1624 aa15.46■□□□□ 0.07
SPTLC3-204ENST00000450297 PTPRKQ15262 1439 aa15.45■□□□□ 0.06
SPTLC3-204ENST00000450297 SOCS7O14512 581 aa15.45■□□□□ 0.06
SPTLC3-204ENST00000450297 MROH2AA6NES4 1674 aa15.44■□□□□ 0.06
SPTLC3-204ENST00000450297 CLTCQ00610 1675 aaKnown RBP15.44■□□□□ 0.06
SPTLC3-204ENST00000450297 KIF3BO15066 747 aa15.44■□□□□ 0.06
SPTLC3-204ENST00000450297 IQSEC2Q5JU85 1478 aa15.43■□□□□ 0.06
SPTLC3-204ENST00000450297 INO80Q9ULG1 1556 aaPredicted RBP15.43■□□□□ 0.06
SPTLC3-204ENST00000450297 PLXNC1O60486 1568 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms