RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 DAXXQ9UER7 740 aaPredicted RBP18.87■□□□□ 0.61
CHFR-205ENST00000450056 CCDC18Q5T9S5 1454 aa18.86■□□□□ 0.61
CHFR-205ENST00000450056 TMC1Q8TDI8 760 aa18.86■□□□□ 0.61
CHFR-205ENST00000450056 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
CHFR-205ENST00000450056 GRIN2BQ13224 1484 aa18.86■□□□□ 0.61
CHFR-205ENST00000450056 SAMD9Q5K651 1589 aa18.85■□□□□ 0.61
CHFR-205ENST00000450056 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
CHFR-205ENST00000450056 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
CHFR-205ENST00000450056 NUDCQ9Y266 331 aa18.83■□□□□ 0.61
CHFR-205ENST00000450056 EIF4G3O43432 1585 aaKnown RBP18.83■□□□□ 0.6
CHFR-205ENST00000450056 SLC4A3P48751 1232 aa18.82■□□□□ 0.6
CHFR-205ENST00000450056 BRPF3Q9ULD4 1205 aa18.82■□□□□ 0.6
CHFR-205ENST00000450056 PCF11O94913 1555 aaKnown RBP18.81■□□□□ 0.6
CHFR-205ENST00000450056 SKAP1Q86WV1 359 aa18.8■□□□□ 0.6
CHFR-205ENST00000450056 EXOC6Q8TAG9 804 aa18.79■□□□□ 0.6
CHFR-205ENST00000450056 CNTLNQ9NXG0 1405 aa18.79■□□□□ 0.6
CHFR-205ENST00000450056 CFAP43Q8NDM7 1665 aa18.78■□□□□ 0.6
CHFR-205ENST00000450056 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
CHFR-205ENST00000450056 PDE4AP27815 886 aa18.75■□□□□ 0.59
CHFR-205ENST00000450056 UACAQ9BZF9 1416 aa18.75■□□□□ 0.59
CHFR-205ENST00000450056 KIF7Q2M1P5 1343 aa18.74■□□□□ 0.59
CHFR-205ENST00000450056 MPHOSPH9Q99550 1183 aa18.74■□□□□ 0.59
CHFR-205ENST00000450056 FYCO1Q9BQS8 1478 aa18.73■□□□□ 0.59
CHFR-205ENST00000450056 NBPF8Q3BBV2 869 aa18.73■□□□□ 0.59
CHFR-205ENST00000450056 SNAPC4Q5SXM2 1469 aa18.72■□□□□ 0.59
CHFR-205ENST00000450056 CASKIN1Q8WXD9 1431 aa18.72■□□□□ 0.59
CHFR-205ENST00000450056 PTPRKQ15262 1439 aa18.71■□□□□ 0.59
CHFR-205ENST00000450056 IQGAP2Q13576 1575 aa18.71■□□□□ 0.59
CHFR-205ENST00000450056 FGD6Q6ZV73 1430 aa18.71■□□□□ 0.59
CHFR-205ENST00000450056 ARXQ96QS3 562 aa18.71■□□□□ 0.59
CHFR-205ENST00000450056 PLIN1O60240 522 aa18.7■□□□□ 0.58
CHFR-205ENST00000450056 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
CHFR-205ENST00000450056 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
CHFR-205ENST00000450056 FMN1Q68DA7 1419 aa18.68■□□□□ 0.58
CHFR-205ENST00000450056 LRRIQ1Q96JM4 1722 aa18.68■□□□□ 0.58
CHFR-205ENST00000450056 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
CHFR-205ENST00000450056 GRIN2AQ12879 1464 aa18.66■□□□□ 0.58
CHFR-205ENST00000450056 UGGT2Q9NYU1 1516 aa18.65■□□□□ 0.58
CHFR-205ENST00000450056 KDM2AQ9Y2K7 1162 aa18.64■□□□□ 0.58
CHFR-205ENST00000450056 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
CHFR-205ENST00000450056 RCAN3Q9UKA8 241 aa18.63■□□□□ 0.57
CHFR-205ENST00000450056 NAIPQ13075 1403 aa18.63■□□□□ 0.57
CHFR-205ENST00000450056 RRP1P56182 461 aaKnown RBP18.62■□□□□ 0.57
CHFR-205ENST00000450056 GSE1Q14687 1217 aa18.62■□□□□ 0.57
CHFR-205ENST00000450056 KIAA0586Q9BVV6 1533 aa18.61■□□□□ 0.57
CHFR-205ENST00000450056 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
CHFR-205ENST00000450056 SMG6Q86US8 1419 aaKnown RBP18.61■□□□□ 0.57
CHFR-205ENST00000450056 SYNJ2O15056 1496 aa18.6■□□□□ 0.57
CHFR-205ENST00000450056 FRAT1Q92837 279 aaPredicted RBP18.59■□□□□ 0.57
CHFR-205ENST00000450056 CEP170Q5SW79 1584 aa18.58■□□□□ 0.57
CHFR-205ENST00000450056 NFKBIBQ15653 356 aa18.58■□□□□ 0.57
CHFR-205ENST00000450056 BACH2Q9BYV9 841 aa18.58■□□□□ 0.57
CHFR-205ENST00000450056 USP35Q9P2H5 1018 aa18.58■□□□□ 0.56
CHFR-205ENST00000450056 RGS3P49796 1198 aa18.56■□□□□ 0.56
CHFR-205ENST00000450056 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
CHFR-205ENST00000450056 DISP1Q96F81 1524 aa18.56■□□□□ 0.56
CHFR-205ENST00000450056 KIAA0556O60303 1618 aa18.55■□□□□ 0.56
CHFR-205ENST00000450056 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
CHFR-205ENST00000450056 NCOA1Q15788 1441 aa18.55■□□□□ 0.56
CHFR-205ENST00000450056 DDRGK1Q96HY6 314 aa18.54■□□□□ 0.56
CHFR-205ENST00000450056 ZNF777Q9ULD5 760 aaPredicted RBP18.54■□□□□ 0.56
CHFR-205ENST00000450056 NUP160Q12769 1436 aa18.52■□□□□ 0.56
CHFR-205ENST00000450056 CRBNQ96SW2 442 aa18.51■□□□□ 0.55
CHFR-205ENST00000450056 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
CHFR-205ENST00000450056 CARD11Q9BXL7 1154 aa18.5■□□□□ 0.55
CHFR-205ENST00000450056 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
CHFR-205ENST00000450056 NCOA2Q15596 1464 aa18.49■□□□□ 0.55
CHFR-205ENST00000450056 FRAT2O75474 233 aaPredicted RBP18.48■□□□□ 0.55
CHFR-205ENST00000450056 MYOM3Q5VTT5 1437 aa18.48■□□□□ 0.55
CHFR-205ENST00000450056 CC2D1BQ5T0F9 858 aaKnown RBP18.47■□□□□ 0.55
CHFR-205ENST00000450056 MAGI3Q5TCQ9 1506 aa18.47■□□□□ 0.55
CHFR-205ENST00000450056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.542e-6■■■□□ 17.8
CHFR-205ENST00000450056 CHMP7Q8WUX9 453 aaPredicted RBP18.45■□□□□ 0.54
CHFR-205ENST00000450056 USP47Q96K76 1375 aa18.45■□□□□ 0.54
CHFR-205ENST00000450056 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
CHFR-205ENST00000450056 ARHGEF11O15085 1522 aa18.44■□□□□ 0.54
CHFR-205ENST00000450056 RNF123Q5XPI4 1314 aa18.44■□□□□ 0.54
CHFR-205ENST00000450056 EPRSP07814 1512 aaKnown RBP18.43■□□□□ 0.54
CHFR-205ENST00000450056 ZNF644Q9H582 1327 aaPredicted RBP18.43■□□□□ 0.54
CHFR-205ENST00000450056 ST20-MTHFSA0A0A6YYL1 179 aa18.42■□□□□ 0.54
CHFR-205ENST00000450056 UBE2Q2Q8WVN8 375 aa18.42■□□□□ 0.54
CHFR-205ENST00000450056 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
CHFR-205ENST00000450056 MS4A1P11836 297 aa18.42■□□□□ 0.54
CHFR-205ENST00000450056 SUPT6HQ7KZ85 1726 aaKnown RBP18.41■□□□□ 0.54
CHFR-205ENST00000450056 KDM5BQ9UGL1 1544 aa18.41■□□□□ 0.54
CHFR-205ENST00000450056 C20orf194Q5TEA3 1177 aa18.4■□□□□ 0.54
CHFR-205ENST00000450056 SLKQ9H2G2 1235 aaPredicted RBP18.4■□□□□ 0.54
CHFR-205ENST00000450056 RAPGEF6Q8TEU7 1601 aa18.39■□□□□ 0.53
CHFR-205ENST00000450056 PKD2Q13563 968 aa18.39■□□□□ 0.53
CHFR-205ENST00000450056 CDK13Q14004 1512 aaKnown RBP18.39■□□□□ 0.53
CHFR-205ENST00000450056 CHD1O14646 1710 aa18.38■□□□□ 0.53
CHFR-205ENST00000450056 NUP153P49790 1475 aaKnown RBP18.36■□□□□ 0.53
CHFR-205ENST00000450056 DHX29Q7Z478 1369 aaKnown RBP18.36■□□□□ 0.53
CHFR-205ENST00000450056 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
CHFR-205ENST00000450056 MYBBP1AQ9BQG0 1328 aaKnown RBP18.36■□□□□ 0.53
CHFR-205ENST00000450056 DCAF11Q8TEB1 546 aa18.36■□□□□ 0.53
CHFR-205ENST00000450056 FBLN2P98095 1184 aa18.35■□□□□ 0.53
CHFR-205ENST00000450056 SPRYD3Q8NCJ5 442 aa18.35■□□□□ 0.53
CHFR-205ENST00000450056 ANKRD30BQ9BXX2 1392 aa18.32■□□□□ 0.52
CHFR-205ENST00000450056 JPH4Q96JJ6 628 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms