RNA–Protein interactions for RNA: ENST00000449980.1

TRO-216, Transcript of trophinin, humanhuman

TSL 4

Gene TRO, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-216ENST00000449980 EFCAB5A4FU69 1503 aa8.9□□□□□ -0.98
TRO-216ENST00000449980 EEA1Q15075 1411 aa8.9□□□□□ -0.98
TRO-216ENST00000449980 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.98
TRO-216ENST00000449980 ILDR2Q71H61 639 aa8.9□□□□□ -0.98
TRO-216ENST00000449980 NUP153P49790 1475 aaKnown RBP8.89□□□□□ -0.99
TRO-216ENST00000449980 PTPRTO14522 1441 aa8.89□□□□□ -0.99
TRO-216ENST00000449980 UHRF1BP1Q6BDS2 1440 aa8.89□□□□□ -0.99
TRO-216ENST00000449980 CEBPAP49715 358 aaPredicted RBP8.89□□□□□ -0.99
TRO-216ENST00000449980 MADDQ8WXG6 1647 aa8.88□□□□□ -0.99
TRO-216ENST00000449980 ATP1B4Q9UN42 357 aaPredicted RBP8.88□□□□□ -0.99
TRO-216ENST00000449980 ZFYVE16Q7Z3T8 1539 aa8.88□□□□□ -0.99
TRO-216ENST00000449980 C9orf84Q5VXU9 1444 aa8.88□□□□□ -0.99
TRO-216ENST00000449980 ARHGEF40Q8TER5 1519 aa8.87□□□□□ -0.99
TRO-216ENST00000449980 RAPGEF6Q8TEU7 1601 aa8.87□□□□□ -0.99
TRO-216ENST00000449980 CFAP74Q9C0B2 1584 aa8.86□□□□□ -0.99
TRO-216ENST00000449980 ZMYM4Q5VZL5 1548 aa8.86□□□□□ -0.99
TRO-216ENST00000449980 CTTNBP2Q8WZ74 1663 aa8.86□□□□□ -0.99
TRO-216ENST00000449980 AFAP1Q8N556 730 aa8.86□□□□□ -0.99
TRO-216ENST00000449980 TRAPPC8Q9Y2L5 1435 aa8.86□□□□□ -0.99
TRO-216ENST00000449980 IQSEC2Q5JU85 1478 aa8.85□□□□□ -0.99
TRO-216ENST00000449980 PKD2Q13563 968 aa8.85□□□□□ -0.99
TRO-216ENST00000449980 ZNF518AQ6AHZ1 1483 aa8.84□□□□□ -0.99
TRO-216ENST00000449980 FRMPD1Q5SYB0 1578 aa8.84□□□□□ -0.99
TRO-216ENST00000449980 CNTLNQ9NXG0 1405 aa8.84□□□□□ -0.99
TRO-216ENST00000449980 SAMD9Q5K651 1589 aa8.83□□□□□ -1
TRO-216ENST00000449980 FMN1Q68DA7 1419 aa8.83□□□□□ -1
TRO-216ENST00000449980 UBTFP17480 764 aaKnown RBP8.83□□□□□ -1
TRO-216ENST00000449980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.83□□□□□ -1
TRO-216ENST00000449980 ARHGEF12Q9NZN5 1544 aa8.83□□□□□ -1
TRO-216ENST00000449980 CLIP1P30622 1438 aa8.82□□□□□ -1
TRO-216ENST00000449980 UBAP1LF5GYI3 381 aa8.82□□□□□ -1
TRO-216ENST00000449980 RIMS1Q86UR5 1692 aaKnown RBP8.81□□□□□ -1
TRO-216ENST00000449980 TTC37Q6PGP7 1564 aa8.81□□□□□ -1
TRO-216ENST00000449980 TOM1O60784 492 aa8.8□□□□□ -1
TRO-216ENST00000449980 HECW1Q76N89 1606 aa8.8□□□□□ -1
TRO-216ENST00000449980 MLH3Q9UHC1 1453 aa8.79□□□□□ -1
TRO-216ENST00000449980 NPATQ14207 1427 aa8.79□□□□□ -1
TRO-216ENST00000449980 ZMYM3Q14202 1370 aa8.78□□□□□ -1
TRO-216ENST00000449980 RICTORQ6R327 1708 aa8.78□□□□□ -1
TRO-216ENST00000449980 TROQ12816 1431 aaPredicted RBP8.78□□□□□ -1
TRO-216ENST00000449980 SETD1BQ9UPS6 1966 aaKnown RBP8.77□□□□□ -1
TRO-216ENST00000449980 CACNB1Q02641 598 aaPredicted RBP8.77□□□□□ -1.01
TRO-216ENST00000449980 AGLP35573 1532 aa8.76□□□□□ -1.01
TRO-216ENST00000449980 NCOA1Q15788 1441 aa8.76□□□□□ -1.01
TRO-216ENST00000449980 SPAG9O60271 1321 aaKnown RBP8.76□□□□□ -1.01
TRO-216ENST00000449980 NCKAP5LQ9HCH0 1330 aa8.75□□□□□ -1.01
TRO-216ENST00000449980 ARHGAP5Q13017 1502 aa8.75□□□□□ -1.01
TRO-216ENST00000449980 PREX1Q8TCU6 1659 aa8.74□□□□□ -1.01
TRO-216ENST00000449980 REREQ9P2R6 1566 aa8.73□□□□□ -1.01
TRO-216ENST00000449980 ZNF335Q9H4Z2 1342 aaPredicted RBP8.73□□□□□ -1.01
TRO-216ENST00000449980 GGT6Q6P531 493 aa8.72□□□□□ -1.01
TRO-216ENST00000449980 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
TRO-216ENST00000449980 THEMISQ8N1K5 641 aaPredicted RBP8.72□□□□□ -1.01
TRO-216ENST00000449980 ZNF777Q9ULD5 760 aaPredicted RBP8.72□□□□□ -1.01
TRO-216ENST00000449980 LTBP4Q8N2S1 1624 aa8.72□□□□□ -1.01
TRO-216ENST00000449980 FER1L4A9Z1Z3 1794 aa8.71□□□□□ -1.01
TRO-216ENST00000449980 CDK13Q14004 1512 aaKnown RBP8.71□□□□□ -1.01
TRO-216ENST00000449980 KDM5CP41229 1560 aa8.71□□□□□ -1.02
TRO-216ENST00000449980 SPATA31D1Q6ZQQ2 1576 aa8.71□□□□□ -1.02
TRO-216ENST00000449980 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.02
TRO-216ENST00000449980 CFDP1Q9UEE9 299 aaPredicted RBP8.71□□□□□ -1.02
TRO-216ENST00000449980 SCAF1Q9H7N4 1312 aaKnown RBP8.71□□□□□ -1.02
TRO-216ENST00000449980 PLA2R1Q13018 1463 aa8.7□□□□□ -1.02
TRO-216ENST00000449980 KIAA1107Q9UPP5 1409 aa8.7□□□□□ -1.02
TRO-216ENST00000449980 DCAF8L1A6NGE4 600 aa8.69□□□□□ -1.02
TRO-216ENST00000449980 HSPA1LP34931 641 aa8.69□□□□□ -1.02
TRO-216ENST00000449980 HNRNPMP52272 730 aaKnown RBP eCLIP8.69□□□□□ -1.02
TRO-216ENST00000449980 PIP4K2BP78356 416 aa8.69□□□□□ -1.02
TRO-216ENST00000449980 PLEKHH2Q8IVE3 1493 aa8.69□□□□□ -1.02
TRO-216ENST00000449980 PTPRKQ15262 1439 aa8.68□□□□□ -1.02
TRO-216ENST00000449980 KIF14Q15058 1648 aa8.68□□□□□ -1.02
TRO-216ENST00000449980 STRCQ7RTU9 1775 aa8.68□□□□□ -1.02
TRO-216ENST00000449980 CCDC18Q5T9S5 1454 aa8.67□□□□□ -1.02
TRO-216ENST00000449980 CAMSAP1Q5T5Y3 1602 aa8.66□□□□□ -1.02
TRO-216ENST00000449980 DIP2CQ9Y2E4 1556 aa8.65□□□□□ -1.02
TRO-216ENST00000449980 TCOF1Q13428 1488 aaKnown RBP8.65□□□□□ -1.02
TRO-216ENST00000449980 ARHGAP35Q9NRY4 1499 aa8.65□□□□□ -1.02
TRO-216ENST00000449980 CASKIN1Q8WXD9 1431 aa8.65□□□□□ -1.02
TRO-216ENST00000449980 WASHC2CQ9Y4E1 1318 aa8.65□□□□□ -1.02
TRO-216ENST00000449980 A2MP01023 1474 aa8.64□□□□□ -1.03
TRO-216ENST00000449980 CCNB3Q8WWL7 1395 aa8.64□□□□□ -1.03
TRO-216ENST00000449980 SIGLEC1Q9BZZ2 1709 aa8.64□□□□□ -1.03
TRO-216ENST00000449980 EHMT2Q96KQ7 1210 aa8.64□□□□□ -1.03
TRO-216ENST00000449980 CPS1P31327 1500 aa8.64□□□□□ -1.03
TRO-216ENST00000449980 MYO5CQ9NQX4 1742 aa8.63□□□□□ -1.03
TRO-216ENST00000449980 DHX29Q7Z478 1369 aaKnown RBP8.63□□□□□ -1.03
TRO-216ENST00000449980 TSPY4P0CV99 314 aa8.63□□□□□ -1.03
TRO-216ENST00000449980 TSPY10P0CW01 314 aa8.63□□□□□ -1.03
TRO-216ENST00000449980 RTEL1-TNFRSF6BF6WH68 1400 aa8.63□□□□□ -1.03
TRO-216ENST00000449980 KIF3BO15066 747 aa8.62□□□□□ -1.03
TRO-216ENST00000449980 A2ML1A8K2U0 1454 aa8.62□□□□□ -1.03
TRO-216ENST00000449980 SHANK2Q9UPX8 1470 aa8.62□□□□□ -1.03
TRO-216ENST00000449980 TNRQ92752 1358 aa8.61□□□□□ -1.03
TRO-216ENST00000449980 ABCC1P33527 1531 aa8.61□□□□□ -1.03
TRO-216ENST00000449980 GPATCH8Q9UKJ3 1502 aaKnown RBP8.61□□□□□ -1.03
TRO-216ENST00000449980 C3P01024 1663 aa8.61□□□□□ -1.03
TRO-216ENST00000449980 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
TRO-216ENST00000449980 MIA2Q96PC5 1412 aa8.6□□□□□ -1.03
TRO-216ENST00000449980 MTUS2Q5JR59 1369 aa8.6□□□□□ -1.03
TRO-216ENST00000449980 SAMD9LQ8IVG5 1584 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms