RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 EIF4G3O43432 1585 aaKnown RBP11.82□□□□□ -0.52
HCG18-238ENST00000449544 ARHGAP5Q13017 1502 aa11.8□□□□□ -0.52
HCG18-238ENST00000449544 NUP155O75694 1391 aa11.79□□□□□ -0.52
HCG18-238ENST00000449544 NUTM2FA1L443 756 aa11.79□□□□□ -0.52
HCG18-238ENST00000449544 AKNAQ7Z591 1439 aa11.77□□□□□ -0.52
HCG18-238ENST00000449544 IQGAP2Q13576 1575 aa11.77□□□□□ -0.52
HCG18-238ENST00000449544 ARHGAP35Q9NRY4 1499 aa11.77□□□□□ -0.53
HCG18-238ENST00000449544 TONSLQ96HA7 1378 aa11.77□□□□□ -0.53
HCG18-238ENST00000449544 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
HCG18-238ENST00000449544 DENND4BO75064 1496 aaPredicted RBP11.75□□□□□ -0.53
HCG18-238ENST00000449544 TOM1O60784 492 aa11.75□□□□□ -0.53
HCG18-238ENST00000449544 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.75□□□□□ -0.53
HCG18-238ENST00000449544 SOX12O15370 315 aa11.75□□□□□ -0.53
HCG18-238ENST00000449544 PKD2Q13563 968 aa11.74□□□□□ -0.53
HCG18-238ENST00000449544 ZNF644Q9H582 1327 aaPredicted RBP11.74□□□□□ -0.53
HCG18-238ENST00000449544 PPP6R1Q9UPN7 881 aa11.74□□□□□ -0.53
HCG18-238ENST00000449544 SRPK2P78362 688 aaKnown RBP11.73□□□□□ -0.53
HCG18-238ENST00000449544 FOXD1Q16676 465 aa11.73□□□□□ -0.53
HCG18-238ENST00000449544 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
HCG18-238ENST00000449544 NGDNQ8NEJ9 315 aaKnown RBP11.72□□□□□ -0.53
HCG18-238ENST00000449544 NUTM2BA6NNL0 878 aaPredicted RBP11.72□□□□□ -0.53
HCG18-238ENST00000449544 NUTM2EB1AL46 878 aaPredicted RBP11.72□□□□□ -0.53
HCG18-238ENST00000449544 NUTM2AQ8IVF1 878 aaPredicted RBP11.72□□□□□ -0.53
HCG18-238ENST00000449544 THOC2Q8NI27 1593 aaKnown RBP11.71□□□□□ -0.54
HCG18-238ENST00000449544 DCAF8L1A6NGE4 600 aa11.71□□□□□ -0.54
HCG18-238ENST00000449544 VPS8Q8N3P4 1428 aa11.7□□□□□ -0.54
HCG18-238ENST00000449544 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
HCG18-238ENST00000449544 VGFO15240 615 aaPredicted RBP11.7□□□□□ -0.54
HCG18-238ENST00000449544 ADGRL1O94910 1474 aa11.69□□□□□ -0.54
HCG18-238ENST00000449544 DCAF11Q8TEB1 546 aa11.69□□□□□ -0.54
HCG18-238ENST00000449544 ZEB1P37275 1124 aaPredicted RBP11.69□□□□□ -0.54
HCG18-238ENST00000449544 SF3B2Q13435 895 aaKnown RBP11.69□□□□□ -0.54
HCG18-238ENST00000449544 SLC26A8Q96RN1 970 aa11.69□□□□□ -0.54
HCG18-238ENST00000449544 TROQ12816 1431 aaPredicted RBP11.68□□□□□ -0.54
HCG18-238ENST00000449544 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
HCG18-238ENST00000449544 NUP160Q12769 1436 aa11.67□□□□□ -0.54
HCG18-238ENST00000449544 ARXQ96QS3 562 aa11.66□□□□□ -0.54
HCG18-238ENST00000449544 FANCAO15360 1455 aa11.65□□□□□ -0.54
HCG18-238ENST00000449544 WDR7Q9Y4E6 1490 aa11.65□□□□□ -0.54
HCG18-238ENST00000449544 EVA1CP58658 441 aa11.65□□□□□ -0.54
HCG18-238ENST00000449544 CUL7Q14999 1698 aa11.65□□□□□ -0.54
HCG18-238ENST00000449544 PLEKHH2Q8IVE3 1493 aa11.64□□□□□ -0.55
HCG18-238ENST00000449544 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
HCG18-238ENST00000449544 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
HCG18-238ENST00000449544 KIF15Q9NS87 1388 aa11.63□□□□□ -0.55
HCG18-238ENST00000449544 NPHP1O15259 732 aa11.63□□□□□ -0.55
HCG18-238ENST00000449544 CEP170Q5SW79 1584 aa11.62□□□□□ -0.55
HCG18-238ENST00000449544 PSME1Q06323 249 aa11.62□□□□□ -0.55
HCG18-238ENST00000449544 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
HCG18-238ENST00000449544 MYOM3Q5VTT5 1437 aa11.61□□□□□ -0.55
HCG18-238ENST00000449544 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
HCG18-238ENST00000449544 CDCA8Q53HL2 280 aa11.6□□□□□ -0.55
HCG18-238ENST00000449544 CARD11Q9BXL7 1154 aa11.6□□□□□ -0.55
HCG18-238ENST00000449544 ADAMTS12P58397 1594 aa11.59□□□□□ -0.55
HCG18-238ENST00000449544 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
HCG18-238ENST00000449544 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
HCG18-238ENST00000449544 LMTK3Q96Q04 1460 aa11.58□□□□□ -0.56
HCG18-238ENST00000449544 TRAK1Q9UPV9 953 aa11.56□□□□□ -0.56
HCG18-238ENST00000449544 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
HCG18-238ENST00000449544 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
HCG18-238ENST00000449544 CDK13Q14004 1512 aaKnown RBP11.54□□□□□ -0.56
HCG18-238ENST00000449544 HDGFL2Q7Z4V5 671 aaPredicted RBP11.54□□□□□ -0.56
HCG18-238ENST00000449544 UHRF1BP1Q6BDS2 1440 aa11.54□□□□□ -0.56
HCG18-238ENST00000449544 NGLY1Q96IV0 654 aa11.54□□□□□ -0.56
HCG18-238ENST00000449544 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
HCG18-238ENST00000449544 ATP10BO94823 1461 aa11.54□□□□□ -0.56
HCG18-238ENST00000449544 MPHOSPH9Q99550 1183 aa11.54□□□□□ -0.56
HCG18-238ENST00000449544 RBM33Q96EV2 1170 aaKnown RBP11.53□□□□□ -0.56
HCG18-238ENST00000449544 MSH5O43196 834 aa11.53□□□□□ -0.56
HCG18-238ENST00000449544 EPRSP07814 1512 aaKnown RBP11.52□□□□□ -0.56
HCG18-238ENST00000449544 ADAMTS2O95450 1211 aa11.52□□□□□ -0.57
HCG18-238ENST00000449544 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
HCG18-238ENST00000449544 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
HCG18-238ENST00000449544 RIMBP3CA6NJZ7 1639 aa11.51□□□□□ -0.57
HCG18-238ENST00000449544 RIMBP3BA6NNM3 1639 aa11.51□□□□□ -0.57
HCG18-238ENST00000449544 RIMBP3Q9UFD9 1639 aa11.51□□□□□ -0.57
HCG18-238ENST00000449544 TNRQ92752 1358 aa11.5□□□□□ -0.57
HCG18-238ENST00000449544 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
HCG18-238ENST00000449544 CHD1O14646 1710 aa11.5□□□□□ -0.57
HCG18-238ENST00000449544 USP35Q9P2H5 1018 aa11.5□□□□□ -0.57
HCG18-238ENST00000449544 WDR97A6NE52 1622 aa11.5□□□□□ -0.57
HCG18-238ENST00000449544 HECW1Q76N89 1606 aa11.5□□□□□ -0.57
HCG18-238ENST00000449544 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
HCG18-238ENST00000449544 CCDC144AA2RUR9 1427 aa11.49□□□□□ -0.57
HCG18-238ENST00000449544 CADPS2Q86UW7 1296 aa11.49□□□□□ -0.57
HCG18-238ENST00000449544 ABCC10Q5T3U5 1492 aa11.48□□□□□ -0.57
HCG18-238ENST00000449544 ANKRD50Q9ULJ7 1429 aa11.48□□□□□ -0.57
HCG18-238ENST00000449544 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
HCG18-238ENST00000449544 PLCH2O75038 1416 aa11.48□□□□□ -0.57
HCG18-238ENST00000449544 TNNT2P45379 298 aaPredicted RBP11.48□□□□□ -0.57
HCG18-238ENST00000449544 NCOA2Q15596 1464 aa11.47□□□□□ -0.57
HCG18-238ENST00000449544 LTV1Q96GA3 475 aaPredicted RBP11.47□□□□□ -0.57
HCG18-238ENST00000449544 FYCO1Q9BQS8 1478 aa11.46□□□□□ -0.57
HCG18-238ENST00000449544 C9orf84Q5VXU9 1444 aa11.46□□□□□ -0.58
HCG18-238ENST00000449544 MSH6P52701 1360 aa11.45□□□□□ -0.58
HCG18-238ENST00000449544 KDM6BO15054 1643 aa11.45□□□□□ -0.58
HCG18-238ENST00000449544 ZNF518AQ6AHZ1 1483 aa11.45□□□□□ -0.58
HCG18-238ENST00000449544 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
HCG18-238ENST00000449544 GPRASP1Q5JY77 1395 aa11.45□□□□□ -0.58
HCG18-238ENST00000449544 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms