RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 ANKRD30BQ9BXX2 1392 aa23.47■■□□□ 1.35
SNHG17-207ENST00000449469 ABCC5O15440 1437 aa23.47■■□□□ 1.35
SNHG17-207ENST00000449469 NCOA1Q15788 1441 aa23.45■■□□□ 1.35
SNHG17-207ENST00000449469 ITSN2Q9NZM3 1697 aa23.45■■□□□ 1.34
SNHG17-207ENST00000449469 TEX14Q8IWB6 1497 aa23.44■■□□□ 1.34
SNHG17-207ENST00000449469 GRIN2AQ12879 1464 aa23.44■■□□□ 1.34
SNHG17-207ENST00000449469 POLR1AO95602 1720 aaPredicted RBP23.43■■□□□ 1.34
SNHG17-207ENST00000449469 DNAJC5BQ9UF47 199 aa23.41■■□□□ 1.34
SNHG17-207ENST00000449469 ADGBQ8N7X0 1667 aa23.41■■□□□ 1.34
SNHG17-207ENST00000449469 L3MBTL2Q969R5 705 aa23.41■■□□□ 1.34
SNHG17-207ENST00000449469 ADCY10Q96PN6 1610 aa23.4■■□□□ 1.34
SNHG17-207ENST00000449469 TROQ12816 1431 aaPredicted RBP23.4■■□□□ 1.34
SNHG17-207ENST00000449469 BCANQ96GW7 911 aa23.39■■□□□ 1.34
SNHG17-207ENST00000449469 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.33
SNHG17-207ENST00000449469 CCDC7Q96M83 1385 aa23.38■■□□□ 1.33
SNHG17-207ENST00000449469 ERICH6BQ5W0A0 696 aa23.38■■□□□ 1.33
SNHG17-207ENST00000449469 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
SNHG17-207ENST00000449469 ADGRL2O95490 1459 aa23.37■■□□□ 1.33
SNHG17-207ENST00000449469 EIF4G3O43432 1585 aaKnown RBP23.37■■□□□ 1.33
SNHG17-207ENST00000449469 HNRNPUQ00839 825 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNHG17-207ENST00000449469 SPATA31E1Q6ZUB1 1445 aa23.34■■□□□ 1.33
SNHG17-207ENST00000449469 CAMSAP2Q08AD1 1489 aa23.33■■□□□ 1.33
SNHG17-207ENST00000449469 CROCC2H7BZ55 1655 aa23.33■■□□□ 1.33
SNHG17-207ENST00000449469 SLC4A1APQ9BWU0 796 aaKnown RBP23.3■■□□□ 1.32
SNHG17-207ENST00000449469 PZPP20742 1482 aa23.3■■□□□ 1.32
SNHG17-207ENST00000449469 MBD5Q9P267 1494 aa23.28■■□□□ 1.32
SNHG17-207ENST00000449469 ANP32EQ9BTT0 268 aa23.28■■□□□ 1.32
SNHG17-207ENST00000449469 PRKRIP1Q9H875 184 aaPredicted RBP23.28■■□□□ 1.32
SNHG17-207ENST00000449469 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
SNHG17-207ENST00000449469 GPATCH8Q9UKJ3 1502 aaKnown RBP23.27■■□□□ 1.32
SNHG17-207ENST00000449469 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
SNHG17-207ENST00000449469 KIAA1107Q9UPP5 1409 aa23.26■■□□□ 1.31
SNHG17-207ENST00000449469 SHANK2Q9UPX8 1470 aa23.24■■□□□ 1.31
SNHG17-207ENST00000449469 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
SNHG17-207ENST00000449469 NBPF8Q3BBV2 869 aa23.23■■□□□ 1.31
SNHG17-207ENST00000449469 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
SNHG17-207ENST00000449469 PRG4Q92954 1404 aaPredicted RBP23.23■■□□□ 1.31
SNHG17-207ENST00000449469 ANKRD30AQ9BXX3 1397 aa23.23■■□□□ 1.31
SNHG17-207ENST00000449469 KIF14Q15058 1648 aa23.23■■□□□ 1.31
SNHG17-207ENST00000449469 ARID4BQ4LE39 1312 aaPredicted RBP23.23■■□□□ 1.31
SNHG17-207ENST00000449469 ZNF644Q9H582 1327 aaPredicted RBP23.23■■□□□ 1.31
SNHG17-207ENST00000449469 ARID3CA6NKF2 412 aa23.23■■□□□ 1.31
SNHG17-207ENST00000449469 FOXD1Q16676 465 aa23.23■■□□□ 1.31
SNHG17-207ENST00000449469 ZBED9Q6R2W3 1325 aa23.22■■□□□ 1.31
SNHG17-207ENST00000449469 NUP160Q12769 1436 aa23.2■■□□□ 1.3
SNHG17-207ENST00000449469 KIF7Q2M1P5 1343 aa23.2■■□□□ 1.3
SNHG17-207ENST00000449469 RBM19Q9Y4C8 960 aaKnown RBP23.2■■□□□ 1.3
SNHG17-207ENST00000449469 C11orf95C9JLR9 678 aaPredicted RBP23.18■■□□□ 1.3
SNHG17-207ENST00000449469 PLB1Q6P1J6 1458 aa23.17■■□□□ 1.3
SNHG17-207ENST00000449469 KDM5DQ9BY66 1539 aa23.17■■□□□ 1.3
SNHG17-207ENST00000449469 ARHGEF12Q9NZN5 1544 aa23.16■■□□□ 1.3
SNHG17-207ENST00000449469 UHRF1BP1Q6BDS2 1440 aa23.15■■□□□ 1.3
SNHG17-207ENST00000449469 MRS2Q9HD23 443 aa23.15■■□□□ 1.3
SNHG17-207ENST00000449469 ANKRD50Q9ULJ7 1429 aa23.14■■□□□ 1.29
SNHG17-207ENST00000449469 ABCA8O94911 1581 aa23.13■■□□□ 1.29
SNHG17-207ENST00000449469 CHMP7Q8WUX9 453 aaPredicted RBP23.13■■□□□ 1.29
SNHG17-207ENST00000449469 ROCK2O75116 1388 aaKnown RBP23.12■■□□□ 1.29
SNHG17-207ENST00000449469 KDM5CP41229 1560 aa23.11■■□□□ 1.29
SNHG17-207ENST00000449469 PPP4R2Q9NY27 417 aa23.11■■□□□ 1.29
SNHG17-207ENST00000449469 ABCC10Q5T3U5 1492 aa23.11■■□□□ 1.29
SNHG17-207ENST00000449469 RALGAPBQ86X10 1494 aa23.11■■□□□ 1.29
SNHG17-207ENST00000449469 CDC42BPAQ5VT25 1732 aa23.11■■□□□ 1.29
SNHG17-207ENST00000449469 USP47Q96K76 1375 aa23.1■■□□□ 1.29
SNHG17-207ENST00000449469 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
SNHG17-207ENST00000449469 ARHGEF5Q12774 1597 aa23.08■■□□□ 1.28
SNHG17-207ENST00000449469 CCDC184Q52MB2 194 aa23.07■■□□□ 1.28
SNHG17-207ENST00000449469 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
SNHG17-207ENST00000449469 DHX29Q7Z478 1369 aaKnown RBP23.07■■□□□ 1.28
SNHG17-207ENST00000449469 JPH4Q96JJ6 628 aa23.05■■□□□ 1.28
SNHG17-207ENST00000449469 FANCIQ9NVI1 1328 aa23.05■■□□□ 1.28
SNHG17-207ENST00000449469 PLEKHD1A6NEE1 506 aa23.05■■□□□ 1.28
SNHG17-207ENST00000449469 PKD2Q13563 968 aa23.05■■□□□ 1.28
SNHG17-207ENST00000449469 FAM9BQ8IZU0 186 aa23.04■■□□□ 1.28
SNHG17-207ENST00000449469 PTPRGP23470 1445 aa23.03■■□□□ 1.28
SNHG17-207ENST00000449469 BCORL1Q5H9F3 1711 aa23.03■■□□□ 1.28
SNHG17-207ENST00000449469 KTN1Q86UP2 1357 aaKnown RBP23.01■■□□□ 1.27
SNHG17-207ENST00000449469 SMG6Q86US8 1419 aaKnown RBP23.01■■□□□ 1.27
SNHG17-207ENST00000449469 ATP10BO94823 1461 aa23.01■■□□□ 1.27
SNHG17-207ENST00000449469 ZNF777Q9ULD5 760 aaPredicted RBP23■■□□□ 1.27
SNHG17-207ENST00000449469 NUP155O75694 1391 aa22.98■■□□□ 1.27
SNHG17-207ENST00000449469 TSPY4P0CV99 314 aa22.96■■□□□ 1.27
SNHG17-207ENST00000449469 TSPY10P0CW01 314 aa22.96■■□□□ 1.27
SNHG17-207ENST00000449469 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
SNHG17-207ENST00000449469 KIF15Q9NS87 1388 aa22.93■■□□□ 1.26
SNHG17-207ENST00000449469 IRX6P78412 446 aaPredicted RBP22.93■■□□□ 1.26
SNHG17-207ENST00000449469 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
SNHG17-207ENST00000449469 PREX2Q70Z35 1606 aa22.92■■□□□ 1.26
SNHG17-207ENST00000449469 NUDCQ9Y266 331 aa22.89■■□□□ 1.25
SNHG17-207ENST00000449469 MAST1Q9Y2H9 1570 aa22.89■■□□□ 1.25
SNHG17-207ENST00000449469 FBLN2P98095 1184 aa22.88■■□□□ 1.25
SNHG17-207ENST00000449469 E9PCH4 1651 aa22.88■■□□□ 1.25
SNHG17-207ENST00000449469 RNF123Q5XPI4 1314 aa22.88■■□□□ 1.25
SNHG17-207ENST00000449469 CARD11Q9BXL7 1154 aa22.88■■□□□ 1.25
SNHG17-207ENST00000449469 ZNF326Q5BKZ1 582 aaKnown RBP22.87■■□□□ 1.25
SNHG17-207ENST00000449469 FAM135AQ9P2D6 1515 aa22.86■■□□□ 1.25
SNHG17-207ENST00000449469 BRD4O60885 1362 aaPredicted RBP22.86■■□□□ 1.25
SNHG17-207ENST00000449469 SAMD9LQ8IVG5 1584 aa22.85■■□□□ 1.25
SNHG17-207ENST00000449469 RALBP1Q15311 655 aa22.84■■□□□ 1.25
SNHG17-207ENST00000449469 UNC13BO14795 1591 aa22.84■■□□□ 1.25
SNHG17-207ENST00000449469 LAMC1P11047 1609 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms