RNA–Protein interactions for RNA: ENST00000449407.6

SORBS2-231, Transcript of sorbin and SH3 domain containing 2, human

TSL 1 (best) BASIC

Gene SORBS2, Length 3,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-231	ENST00000449407	DCAF11	Q8TEB1	546 aa		13.74	□□□□□ -0.21
SORBS2-231	ENST00000449407	RNF123	Q5XPI4	1314 aa		13.73	□□□□□ -0.21
SORBS2-231	ENST00000449407	NCOA1	Q15788	1441 aa		13.73	□□□□□ -0.21
SORBS2-231	ENST00000449407	PNISR	Q8TF01	805 aa	Known RBP	13.72	□□□□□ -0.21
SORBS2-231	ENST00000449407	HFM1	A2PYH4	1435 aa		13.72	□□□□□ -0.21
SORBS2-231	ENST00000449407	FMN1	Q68DA7	1419 aa		13.72	□□□□□ -0.21
SORBS2-231	ENST00000449407	NCOA2	Q15596	1464 aa		13.72	□□□□□ -0.21
SORBS2-231	ENST00000449407	PCF11	O94913	1555 aa	Known RBP	13.72	□□□□□ -0.21
SORBS2-231	ENST00000449407	KDM5B	Q9UGL1	1544 aa		13.71	□□□□□ -0.21
SORBS2-231	ENST00000449407	RGS3	P49796	1198 aa		13.71	□□□□□ -0.22
SORBS2-231	ENST00000449407	DDRGK1	Q96HY6	314 aa		13.71	□□□□□ -0.22
SORBS2-231	ENST00000449407	PKNOX2	Q96KN3	472 aa		13.71	□□□□□ -0.22
SORBS2-231	ENST00000449407	PEG3	Q9GZU2	1588 aa		13.71	□□□□□ -0.22
SORBS2-231	ENST00000449407	CRBN	Q96SW2	442 aa		13.69	□□□□□ -0.22
SORBS2-231	ENST00000449407	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.68	□□□□□ -0.22
SORBS2-231	ENST00000449407	VSIG10	Q8N0Z9	540 aa		13.67	□□□□□ -0.22
SORBS2-231	ENST00000449407	BIVM-ERCC5	R4GMW8	1640 aa		13.66	□□□□□ -0.22
SORBS2-231	ENST00000449407	PTPN23	Q9H3S7	1636 aa		13.66	□□□□□ -0.22
SORBS2-231	ENST00000449407	NCAPD3	P42695	1498 aa		13.66	□□□□□ -0.22
SORBS2-231	ENST00000449407	MAP3K1	Q13233	1512 aa		13.66	□□□□□ -0.22
SORBS2-231	ENST00000449407	C20orf194	Q5TEA3	1177 aa		13.66	□□□□□ -0.22
SORBS2-231	ENST00000449407	RSPH6A	Q9H0K4	717 aa		13.66	□□□□□ -0.22
SORBS2-231	ENST00000449407	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.66	□□□□□ -0.22
SORBS2-231	ENST00000449407	MS4A1	P11836	297 aa		13.65	□□□□□ -0.22
SORBS2-231	ENST00000449407	KDM2A	Q9Y2K7	1162 aa		13.64	□□□□□ -0.23
SORBS2-231	ENST00000449407	SLK	Q9H2G2	1235 aa	Predicted RBP	13.64	□□□□□ -0.23
SORBS2-231	ENST00000449407	POGK	Q9P215	609 aa		13.64	□□□□□ -0.23
SORBS2-231	ENST00000449407	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.63	□□□□□ -0.23
SORBS2-231	ENST00000449407	DHX29	Q7Z478	1369 aa	Known RBP	13.62	□□□□□ -0.23
SORBS2-231	ENST00000449407	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.61	□□□□□ -0.23
SORBS2-231	ENST00000449407	FAM43A	Q8N2R8	423 aa		13.6	□□□□□ -0.23
SORBS2-231	ENST00000449407	CFTR	P13569	1480 aa		13.6	□□□□□ -0.23
SORBS2-231	ENST00000449407	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SORBS2-231	ENST00000449407	DENND4B	O75064	1496 aa	Predicted RBP	13.59	□□□□□ -0.23
SORBS2-231	ENST00000449407	SLC24A1	O60721	1099 aa		13.59	□□□□□ -0.23
SORBS2-231	ENST00000449407	USP47	Q96K76	1375 aa		13.59	□□□□□ -0.23
SORBS2-231	ENST00000449407	SPRYD3	Q8NCJ5	442 aa		13.58	□□□□□ -0.23
SORBS2-231	ENST00000449407	GZF1	Q9H116	711 aa	Predicted RBP	13.58	□□□□□ -0.23
SORBS2-231	ENST00000449407	CC2D1B	Q5T0F9	858 aa	Known RBP	13.58	□□□□□ -0.24
SORBS2-231	ENST00000449407	CARD11	Q9BXL7	1154 aa		13.57	□□□□□ -0.24
SORBS2-231	ENST00000449407	ZMYND15	Q9H091	742 aa		13.57	□□□□□ -0.24
SORBS2-231	ENST00000449407	MYOM3	Q5VTT5	1437 aa		13.57	□□□□□ -0.24
SORBS2-231	ENST00000449407	CASKIN1	Q8WXD9	1431 aa		13.57	□□□□□ -0.24
SORBS2-231	ENST00000449407	ST20-MTHFS	A0A0A6YYL1	179 aa		13.56	□□□□□ -0.24
SORBS2-231	ENST00000449407	GLIPR1L2	Q4G1C9	344 aa		13.55	□□□□□ -0.24
SORBS2-231	ENST00000449407	FYCO1	Q9BQS8	1478 aa		13.54	□□□□□ -0.24
SORBS2-231	ENST00000449407	FAM161A	Q3B820	660 aa		13.54	□□□□□ -0.24
SORBS2-231	ENST00000449407	CFAP43	Q8NDM7	1665 aa		13.54	□□□□□ -0.24
SORBS2-231	ENST00000449407	KDM6B	O15054	1643 aa		13.54	□□□□□ -0.24
SORBS2-231	ENST00000449407	SPATA31E1	Q6ZUB1	1445 aa		13.53	□□□□□ -0.24
SORBS2-231	ENST00000449407	C8orf34	Q49A92	452 aa		13.53	□□□□□ -0.24
SORBS2-231	ENST00000449407	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.53	□□□□□ -0.24
SORBS2-231	ENST00000449407	ZNF644	Q9H582	1327 aa	Predicted RBP	13.53	□□□□□ -0.24
SORBS2-231	ENST00000449407	FGD5	Q6ZNL6	1462 aa		13.52	□□□□□ -0.24
SORBS2-231	ENST00000449407	ANKRD30B	Q9BXX2	1392 aa		13.51	□□□□□ -0.25
SORBS2-231	ENST00000449407	HSP90AA2P	Q14568	343 aa	Predicted RBP	13.5	□□□□□ -0.25
SORBS2-231	ENST00000449407	PANK2	Q9BZ23	570 aa		13.49	□□□□□ -0.25
SORBS2-231	ENST00000449407	PNN	Q9H307	717 aa	Known RBP	13.49	□□□□□ -0.25
SORBS2-231	ENST00000449407	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.49	□□□□□ -0.25
SORBS2-231	ENST00000449407	KIF15	Q9NS87	1388 aa		13.48	□□□□□ -0.25
SORBS2-231	ENST00000449407	PKD2	Q13563	968 aa		13.47	□□□□□ -0.25
SORBS2-231	ENST00000449407	SEC24B	O95487	1268 aa		13.47	□□□□□ -0.25
SORBS2-231	ENST00000449407	NLRP13	Q86W25	1043 aa		13.47	□□□□□ -0.25
SORBS2-231	ENST00000449407	RPRD2	Q5VT52	1461 aa	Known RBP	13.46	□□□□□ -0.25
SORBS2-231	ENST00000449407	RAD54L2	Q9Y4B4	1467 aa		13.46	□□□□□ -0.25
SORBS2-231	ENST00000449407	HSP90AA1	P07900	732 aa	Known RBP	13.46	□□□□□ -0.26
SORBS2-231	ENST00000449407	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.46	□□□□□ -0.26
SORBS2-231	ENST00000449407	KTN1	Q86UP2	1357 aa	Known RBP	13.46	□□□□□ -0.26
SORBS2-231	ENST00000449407	RALBP1	Q15311	655 aa		13.45	□□□□□ -0.26
SORBS2-231	ENST00000449407	LRPPRC	P42704	1394 aa	Known RBP	13.45	□□□□□ -0.26
SORBS2-231	ENST00000449407	PDE3B	Q13370	1112 aa		13.45	□□□□□ -0.26
SORBS2-231	ENST00000449407	BRD4	O60885	1362 aa	Predicted RBP	13.44	□□□□□ -0.26
SORBS2-231	ENST00000449407	TEX14	Q8IWB6	1497 aa		13.44	□□□□□ -0.26
SORBS2-231	ENST00000449407	RGL3	Q3MIN7	710 aa		13.42	□□□□□ -0.26
SORBS2-231	ENST00000449407	KDM2B	Q8NHM5	1336 aa		13.42	□□□□□ -0.26
SORBS2-231	ENST00000449407	XRCC6	P12956	609 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
SORBS2-231	ENST00000449407	ADAMTS8	Q9UP79	889 aa		13.41	□□□□□ -0.26
SORBS2-231	ENST00000449407	BCORL1	Q5H9F3	1711 aa		13.41	□□□□□ -0.26
SORBS2-231	ENST00000449407	GOLGA6L3	A6NEY3	463 aa		13.4	□□□□□ -0.26
SORBS2-231	ENST00000449407	L1TD1	Q5T7N2	865 aa	Known RBP	13.4	□□□□□ -0.26
SORBS2-231	ENST00000449407	SNAPC4	Q5SXM2	1469 aa		13.4	□□□□□ -0.26
SORBS2-231	ENST00000449407	MIA2	Q96PC5	1412 aa		13.4	□□□□□ -0.27
SORBS2-231	ENST00000449407	CCDC146	Q8IYE0	955 aa		13.39	□□□□□ -0.27
SORBS2-231	ENST00000449407	BCAR3	O75815	825 aa		13.38	□□□□□ -0.27
SORBS2-231	ENST00000449407	BECN1	Q14457	450 aa		13.38	□□□□□ -0.27
SORBS2-231	ENST00000449407	ARID3A	Q99856	593 aa		13.38	□□□□□ -0.27
SORBS2-231	ENST00000449407	IGHD	P01880	384 aa		13.37	□□□□□ -0.27
SORBS2-231	ENST00000449407	TDRD9	Q8NDG6	1382 aa	Known RBP	13.37	□□□□□ -0.27
SORBS2-231	ENST00000449407	CANX	P27824	592 aa	Known RBP	13.37	□□□□□ -0.27
SORBS2-231	ENST00000449407	ROCK2	O75116	1388 aa	Known RBP	13.36	□□□□□ -0.27
SORBS2-231	ENST00000449407	PANK3	Q9H999	370 aa		13.36	□□□□□ -0.27
SORBS2-231	ENST00000449407	HECW1	Q76N89	1606 aa		13.35	□□□□□ -0.27
SORBS2-231	ENST00000449407	WDR43	Q15061	677 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
SORBS2-231	ENST00000449407	MAGI3	Q5TCQ9	1506 aa		13.35	□□□□□ -0.27
SORBS2-231	ENST00000449407	NBPF1	Q3BBV0	1214 aa		13.34	□□□□□ -0.27
SORBS2-231	ENST00000449407	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.34	□□□□□ -0.27
SORBS2-231	ENST00000449407	USP19	O94966	1318 aa		13.34	□□□□□ -0.27
SORBS2-231	ENST00000449407	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.33	□□□□□ -0.27
SORBS2-231	ENST00000449407	DUSP27	Q5VZP5	1158 aa		13.33	□□□□□ -0.28
SORBS2-231	ENST00000449407	COG6	Q9Y2V7	657 aa		13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms