RNA–Protein interactions for RNA: ENST00000449234.1

RFX3-208, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-208ENST00000449234 ANP32CO43423 234 aa16.2■□□□□ 0.18
RFX3-208ENST00000449234 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
RFX3-208ENST00000449234 MAGI1Q96QZ7 1491 aaPredicted RBP16.17■□□□□ 0.18
RFX3-208ENST00000449234 DISP1Q96F81 1524 aa16.17■□□□□ 0.18
RFX3-208ENST00000449234 GRIN2AQ12879 1464 aa16.16■□□□□ 0.18
RFX3-208ENST00000449234 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
RFX3-208ENST00000449234 SUPT16HQ9Y5B9 1047 aaKnown RBP16.14■□□□□ 0.17
RFX3-208ENST00000449234 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
RFX3-208ENST00000449234 KDM5BQ9UGL1 1544 aa16.14■□□□□ 0.17
RFX3-208ENST00000449234 RAPGEF6Q8TEU7 1601 aa16.13■□□□□ 0.17
RFX3-208ENST00000449234 MPHOSPH9Q99550 1183 aa16.13■□□□□ 0.17
RFX3-208ENST00000449234 CDK13Q14004 1512 aaKnown RBP16.12■□□□□ 0.17
RFX3-208ENST00000449234 ZNF608Q9ULD9 1512 aaPredicted RBP16.12■□□□□ 0.17
RFX3-208ENST00000449234 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
RFX3-208ENST00000449234 DAPK1P53355 1430 aa16.11■□□□□ 0.17
RFX3-208ENST00000449234 RRP7BPQ9NSQ0 103 aa16.11■□□□□ 0.17
RFX3-208ENST00000449234 NUP153P49790 1475 aaKnown RBP16.1■□□□□ 0.17
RFX3-208ENST00000449234 TRIM52Q96A61 297 aa16.1■□□□□ 0.17
RFX3-208ENST00000449234 TROQ12816 1431 aaPredicted RBP16.1■□□□□ 0.17
RFX3-208ENST00000449234 CARMIL2Q6F5E8 1435 aa16.1■□□□□ 0.17
RFX3-208ENST00000449234 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
RFX3-208ENST00000449234 ABCC5O15440 1437 aa16.09■□□□□ 0.17
RFX3-208ENST00000449234 DENND4BO75064 1496 aaPredicted RBP16.08■□□□□ 0.16
RFX3-208ENST00000449234 EIF4G2P78344 907 aaKnown RBP eCLIP16.07■□□□□ 0.16
RFX3-208ENST00000449234 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
RFX3-208ENST00000449234 ANKRD30BQ9BXX2 1392 aa16.06■□□□□ 0.16
RFX3-208ENST00000449234 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
RFX3-208ENST00000449234 ADCY10Q96PN6 1610 aa16.05■□□□□ 0.16
RFX3-208ENST00000449234 ITSN2Q9NZM3 1697 aa16.05■□□□□ 0.16
RFX3-208ENST00000449234 ADGRL2O95490 1459 aa16.04■□□□□ 0.16
RFX3-208ENST00000449234 RPRD2Q5VT52 1461 aaKnown RBP16.04■□□□□ 0.16
RFX3-208ENST00000449234 NUP160Q12769 1436 aa16.04■□□□□ 0.16
RFX3-208ENST00000449234 CHMP7Q8WUX9 453 aaPredicted RBP16.04■□□□□ 0.16
RFX3-208ENST00000449234 HSPA5P11021 654 aaKnown RBP16.01■□□□□ 0.15
RFX3-208ENST00000449234 KCNH8Q96L42 1107 aa16.01■□□□□ 0.15
RFX3-208ENST00000449234 JPH4Q96JJ6 628 aa16■□□□□ 0.15
RFX3-208ENST00000449234 KDM6BO15054 1643 aa16■□□□□ 0.15
RFX3-208ENST00000449234 ERCC6Q03468 1493 aa15.99■□□□□ 0.15
RFX3-208ENST00000449234 L3MBTL2Q969R5 705 aa15.99■□□□□ 0.15
RFX3-208ENST00000449234 CFDP1Q9UEE9 299 aaPredicted RBP15.99■□□□□ 0.15
RFX3-208ENST00000449234 NCOA1Q15788 1441 aa15.99■□□□□ 0.15
RFX3-208ENST00000449234 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
RFX3-208ENST00000449234 CEP170Q5SW79 1584 aa15.98■□□□□ 0.15
RFX3-208ENST00000449234 NEFLP07196 543 aa15.97■□□□□ 0.15
RFX3-208ENST00000449234 ADGBQ8N7X0 1667 aa15.97■□□□□ 0.15
RFX3-208ENST00000449234 ANKRD30AQ9BXX3 1397 aa15.97■□□□□ 0.15
RFX3-208ENST00000449234 PLEKHD1A6NEE1 506 aa15.96■□□□□ 0.15
RFX3-208ENST00000449234 HIRIP3Q9BW71 556 aaPredicted RBP15.96■□□□□ 0.15
RFX3-208ENST00000449234 CAMSAP2Q08AD1 1489 aa15.96■□□□□ 0.14
RFX3-208ENST00000449234 ARID4BQ4LE39 1312 aaPredicted RBP15.95■□□□□ 0.14
RFX3-208ENST00000449234 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
RFX3-208ENST00000449234 PRG4Q92954 1404 aaPredicted RBP15.94■□□□□ 0.14
RFX3-208ENST00000449234 CNTLNQ9NXG0 1405 aa15.94■□□□□ 0.14
RFX3-208ENST00000449234 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
RFX3-208ENST00000449234 ERICH6BQ5W0A0 696 aa15.94■□□□□ 0.14
RFX3-208ENST00000449234 SHANK2Q9UPX8 1470 aa15.94■□□□□ 0.14
RFX3-208ENST00000449234 ABCA8O94911 1581 aa15.94■□□□□ 0.14
RFX3-208ENST00000449234 TEX14Q8IWB6 1497 aa15.93■□□□□ 0.14
RFX3-208ENST00000449234 KIAA1107Q9UPP5 1409 aa15.93■□□□□ 0.14
RFX3-208ENST00000449234 CCDC7Q96M83 1385 aa15.92■□□□□ 0.14
RFX3-208ENST00000449234 SPATA31E1Q6ZUB1 1445 aa15.92■□□□□ 0.14
RFX3-208ENST00000449234 PZPP20742 1482 aa15.91■□□□□ 0.14
RFX3-208ENST00000449234 ZNF644Q9H582 1327 aaPredicted RBP15.91■□□□□ 0.14
RFX3-208ENST00000449234 CROCC2H7BZ55 1655 aa15.9■□□□□ 0.14
RFX3-208ENST00000449234 ABCC10Q5T3U5 1492 aa15.9■□□□□ 0.14
RFX3-208ENST00000449234 PLB1Q6P1J6 1458 aa15.9■□□□□ 0.14
RFX3-208ENST00000449234 ATP10BO94823 1461 aa15.88■□□□□ 0.13
RFX3-208ENST00000449234 FKBP8Q14318 412 aa15.87■□□□□ 0.13
RFX3-208ENST00000449234 POLR1AO95602 1720 aaPredicted RBP15.87■□□□□ 0.13
RFX3-208ENST00000449234 KDM5DQ9BY66 1539 aa15.87■□□□□ 0.13
RFX3-208ENST00000449234 KIF14Q15058 1648 aa15.86■□□□□ 0.13
RFX3-208ENST00000449234 NBPF8Q3BBV2 869 aa15.86■□□□□ 0.13
RFX3-208ENST00000449234 ARHGEF5Q12774 1597 aa15.86■□□□□ 0.13
RFX3-208ENST00000449234 UHRF1BP1Q6BDS2 1440 aa15.85■□□□□ 0.13
RFX3-208ENST00000449234 ANKRD50Q9ULJ7 1429 aa15.85■□□□□ 0.13
RFX3-208ENST00000449234 ARID3CA6NKF2 412 aa15.85■□□□□ 0.13
RFX3-208ENST00000449234 TSPY4P0CV99 314 aa15.85■□□□□ 0.13
RFX3-208ENST00000449234 TSPY10P0CW01 314 aa15.85■□□□□ 0.13
RFX3-208ENST00000449234 MBD5Q9P267 1494 aa15.84■□□□□ 0.13
RFX3-208ENST00000449234 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
RFX3-208ENST00000449234 TSHZ2Q9NRE2 1034 aa15.83■□□□□ 0.12
RFX3-208ENST00000449234 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
RFX3-208ENST00000449234 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
RFX3-208ENST00000449234 ROCK2O75116 1388 aaKnown RBP15.81■□□□□ 0.12
RFX3-208ENST00000449234 PTPRGP23470 1445 aa15.81■□□□□ 0.12
RFX3-208ENST00000449234 FBLN2P98095 1184 aa15.81■□□□□ 0.12
RFX3-208ENST00000449234 CDC42BPAQ5VT25 1732 aa15.81■□□□□ 0.12
RFX3-208ENST00000449234 ARHGEF12Q9NZN5 1544 aa15.81■□□□□ 0.12
RFX3-208ENST00000449234 C9orf84Q5VXU9 1444 aa15.8■□□□□ 0.12
RFX3-208ENST00000449234 PKD2Q13563 968 aa15.8■□□□□ 0.12
RFX3-208ENST00000449234 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
RFX3-208ENST00000449234 KIF7Q2M1P5 1343 aa15.78■□□□□ 0.12
RFX3-208ENST00000449234 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
RFX3-208ENST00000449234 HNRNPUQ00839 825 aaKnown RBP eCLIP15.78■□□□□ 0.12
RFX3-208ENST00000449234 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
RFX3-208ENST00000449234 NUP155O75694 1391 aa15.75■□□□□ 0.11
RFX3-208ENST00000449234 RALGAPBQ86X10 1494 aa15.75■□□□□ 0.11
RFX3-208ENST00000449234 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
RFX3-208ENST00000449234 ZBED9Q6R2W3 1325 aa15.74■□□□□ 0.11
RFX3-208ENST00000449234 PLEKHH2Q8IVE3 1493 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms