RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 DAPK1P53355 1430 aa21.04■□□□□ 0.96
SF1-211ENST00000448404 L3MBTL2Q969R5 705 aa21.02■□□□□ 0.96
SF1-211ENST00000448404 MIA2Q96PC5 1412 aa21.02■□□□□ 0.96
SF1-211ENST00000448404 KIF14Q15058 1648 aa21.01■□□□□ 0.95
SF1-211ENST00000448404 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
SF1-211ENST00000448404 TIMELESSQ9UNS1 1208 aa21.01■□□□□ 0.95
SF1-211ENST00000448404 NUP160Q12769 1436 aa20.98■□□□□ 0.95
SF1-211ENST00000448404 TROQ12816 1431 aaPredicted RBP20.98■□□□□ 0.95
SF1-211ENST00000448404 KDM5BQ9UGL1 1544 aa20.98■□□□□ 0.95
SF1-211ENST00000448404 CARMIL2Q6F5E8 1435 aa20.97■□□□□ 0.95
SF1-211ENST00000448404 HSPA5P11021 654 aaKnown RBP20.96■□□□□ 0.95
SF1-211ENST00000448404 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
SF1-211ENST00000448404 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
SF1-211ENST00000448404 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
SF1-211ENST00000448404 ZNF326Q5BKZ1 582 aaKnown RBP20.94■□□□□ 0.94
SF1-211ENST00000448404 HNRNPMP52272 730 aaKnown RBP eCLIP20.94■□□□□ 0.94
SF1-211ENST00000448404 NBPF8Q3BBV2 869 aa20.94■□□□□ 0.94
SF1-211ENST00000448404 CAMSAP2Q08AD1 1489 aa20.93■□□□□ 0.94
SF1-211ENST00000448404 GCC2Q8IWJ2 1684 aa20.91■□□□□ 0.94
SF1-211ENST00000448404 ATP10BO94823 1461 aa20.91■□□□□ 0.94
SF1-211ENST00000448404 C11orf95C9JLR9 678 aaPredicted RBP20.91■□□□□ 0.94
SF1-211ENST00000448404 ANP32CO43423 234 aa20.88■□□□□ 0.93
SF1-211ENST00000448404 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
SF1-211ENST00000448404 DNMT1P26358 1616 aaKnown RBP20.87■□□□□ 0.93
SF1-211ENST00000448404 AKNAQ7Z591 1439 aa20.87■□□□□ 0.93
SF1-211ENST00000448404 PTPRGP23470 1445 aa20.86■□□□□ 0.93
SF1-211ENST00000448404 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
SF1-211ENST00000448404 PKD2Q13563 968 aa20.85■□□□□ 0.93
SF1-211ENST00000448404 NCOA1Q15788 1441 aa20.85■□□□□ 0.93
SF1-211ENST00000448404 BCANQ96GW7 911 aa20.84■□□□□ 0.93
SF1-211ENST00000448404 ROCK1Q13464 1354 aa20.82■□□□□ 0.92
SF1-211ENST00000448404 POLR3GLQ9BT43 218 aa20.82■□□□□ 0.92
SF1-211ENST00000448404 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
SF1-211ENST00000448404 SUPT16HQ9Y5B9 1047 aaKnown RBP20.81■□□□□ 0.92
SF1-211ENST00000448404 EIF4G2P78344 907 aaKnown RBP eCLIP20.8■□□□□ 0.921e-7■■□□□ 12.5
SF1-211ENST00000448404 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
SF1-211ENST00000448404 ABCA8O94911 1581 aa20.78■□□□□ 0.92
SF1-211ENST00000448404 PZPP20742 1482 aa20.78■□□□□ 0.92
SF1-211ENST00000448404 KDM2AQ9Y2K7 1162 aa20.75■□□□□ 0.91
SF1-211ENST00000448404 NUP155O75694 1391 aa20.75■□□□□ 0.91
SF1-211ENST00000448404 TSPY4P0CV99 314 aa20.74■□□□□ 0.91
SF1-211ENST00000448404 TSPY10P0CW01 314 aa20.74■□□□□ 0.91
SF1-211ENST00000448404 ANKRD50Q9ULJ7 1429 aa20.74■□□□□ 0.91
SF1-211ENST00000448404 ABCC10Q5T3U5 1492 aa20.74■□□□□ 0.91
SF1-211ENST00000448404 CHD1O14646 1710 aa20.74■□□□□ 0.91
SF1-211ENST00000448404 SENP3-EIF4A1A0A087X0R7 540 aa20.74■□□□□ 0.91
SF1-211ENST00000448404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.74■□□□□ 0.914e-9■■■□□ 19.2
SF1-211ENST00000448404 RPRD2Q5VT52 1461 aaKnown RBP20.73■□□□□ 0.91
SF1-211ENST00000448404 ANKRD30AQ9BXX3 1397 aa20.73■□□□□ 0.91
SF1-211ENST00000448404 C9orf84Q5VXU9 1444 aa20.72■□□□□ 0.91
SF1-211ENST00000448404 CDC42BPAQ5VT25 1732 aa20.71■□□□□ 0.91
SF1-211ENST00000448404 TEX14Q8IWB6 1497 aa20.71■□□□□ 0.91
SF1-211ENST00000448404 ITSN2Q9NZM3 1697 aa20.68■□□□□ 0.9
SF1-211ENST00000448404 KIF15Q9NS87 1388 aa20.67■□□□□ 0.9
SF1-211ENST00000448404 FKBP8Q14318 412 aa20.66■□□□□ 0.9
SF1-211ENST00000448404 ADCY10Q96PN6 1610 aa20.65■□□□□ 0.9
SF1-211ENST00000448404 CCER2I3L3R5 266 aa20.64■□□□□ 0.9
SF1-211ENST00000448404 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.89
SF1-211ENST00000448404 KIAA1107Q9UPP5 1409 aa20.64■□□□□ 0.89
SF1-211ENST00000448404 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
SF1-211ENST00000448404 KIF7Q2M1P5 1343 aa20.63■□□□□ 0.89
SF1-211ENST00000448404 CCDC7Q96M83 1385 aa20.62■□□□□ 0.89
SF1-211ENST00000448404 MBD5Q9P267 1494 aa20.61■□□□□ 0.89
SF1-211ENST00000448404 FAM9BQ8IZU0 186 aa20.61■□□□□ 0.89
SF1-211ENST00000448404 ADGRL2O95490 1459 aa20.6■□□□□ 0.89
SF1-211ENST00000448404 DCAF11Q8TEB1 546 aa20.6■□□□□ 0.89
SF1-211ENST00000448404 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
SF1-211ENST00000448404 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.89
SF1-211ENST00000448404 SAMD9LQ8IVG5 1584 aa20.58■□□□□ 0.89
SF1-211ENST00000448404 TTC37Q6PGP7 1564 aa20.58■□□□□ 0.88
SF1-211ENST00000448404 ADGBQ8N7X0 1667 aa20.58■□□□□ 0.88
SF1-211ENST00000448404 SYCP2Q9BX26 1530 aa20.56■□□□□ 0.88
SF1-211ENST00000448404 ARHGAP5Q13017 1502 aa20.56■□□□□ 0.88
SF1-211ENST00000448404 CDC42BPBQ9Y5S2 1711 aa20.55■□□□□ 0.88
SF1-211ENST00000448404 PRKRIP1Q9H875 184 aaPredicted RBP20.54■□□□□ 0.88
SF1-211ENST00000448404 SPATA31E1Q6ZUB1 1445 aa20.53■□□□□ 0.88
SF1-211ENST00000448404 CNTLNQ9NXG0 1405 aa20.53■□□□□ 0.88
SF1-211ENST00000448404 USP47Q96K76 1375 aa20.53■□□□□ 0.88
SF1-211ENST00000448404 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.52■□□□□ 0.886e-7■■■□□ 15.3
SF1-211ENST00000448404 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
SF1-211ENST00000448404 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
SF1-211ENST00000448404 CCDC141Q6ZP82 1450 aa20.5■□□□□ 0.87
SF1-211ENST00000448404 AFAP1Q8N556 730 aa20.5■□□□□ 0.87
SF1-211ENST00000448404 ARHGEF12Q9NZN5 1544 aa20.49■□□□□ 0.87
SF1-211ENST00000448404 ST20-MTHFSA0A0A6YYL1 179 aa20.49■□□□□ 0.87
SF1-211ENST00000448404 PLEKHH2Q8IVE3 1493 aa20.48■□□□□ 0.87
SF1-211ENST00000448404 NBPF1Q3BBV0 1214 aa20.47■□□□□ 0.87
SF1-211ENST00000448404 SHANK2Q9UPX8 1470 aa20.46■□□□□ 0.87
SF1-211ENST00000448404 ABCC2Q92887 1545 aa20.45■□□□□ 0.86
SF1-211ENST00000448404 PREX2Q70Z35 1606 aa20.44■□□□□ 0.86
SF1-211ENST00000448404 SHROOM2Q13796 1616 aa20.44■□□□□ 0.86
SF1-211ENST00000448404 BCORL1Q5H9F3 1711 aa20.44■□□□□ 0.86
SF1-211ENST00000448404 MYT1LQ9UL68 1186 aa20.43■□□□□ 0.86
SF1-211ENST00000448404 TRAPPC8Q9Y2L5 1435 aa20.42■□□□□ 0.86
SF1-211ENST00000448404 FAM135AQ9P2D6 1515 aa20.42■□□□□ 0.86
SF1-211ENST00000448404 ARHGEF5Q12774 1597 aa20.39■□□□□ 0.85
SF1-211ENST00000448404 EFCAB2Q5VUJ9 269 aa20.38■□□□□ 0.85
SF1-211ENST00000448404 PLA2R1Q13018 1463 aa20.38■□□□□ 0.85
SF1-211ENST00000448404 NEFLP07196 543 aa20.38■□□□□ 0.85
SF1-211ENST00000448404 ROCK2O75116 1388 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms