RNA–Protein interactions for RNA: ENST00000448276.6

SMARCD2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-203ENST00000448276 CTTNBP2Q8WZ74 1663 aa27.86■■■□□ 2.05
SMARCD2-203ENST00000448276 ARID3CA6NKF2 412 aa27.86■■■□□ 2.05
SMARCD2-203ENST00000448276 POLR3GLQ9BT43 218 aa27.84■■■□□ 2.05
SMARCD2-203ENST00000448276 ABCA5Q8WWZ7 1642 aa27.83■■■□□ 2.05
SMARCD2-203ENST00000448276 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
SMARCD2-203ENST00000448276 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
SMARCD2-203ENST00000448276 MAGI3Q5TCQ9 1506 aa27.81■■■□□ 2.04
SMARCD2-203ENST00000448276 SUPT6HQ7KZ85 1726 aaKnown RBP27.81■■■□□ 2.04
SMARCD2-203ENST00000448276 UGGT2Q9NYU1 1516 aa27.76■■■□□ 2.03
SMARCD2-203ENST00000448276 HECW1Q76N89 1606 aa27.76■■■□□ 2.03
SMARCD2-203ENST00000448276 EHBP1L1Q8N3D4 1523 aa27.74■■■□□ 2.03
SMARCD2-203ENST00000448276 ANP32AP39687 249 aaKnown RBP27.73■■■□□ 2.03
SMARCD2-203ENST00000448276 IPO9Q96P70 1041 aaKnown RBP27.73■■■□□ 2.03
SMARCD2-203ENST00000448276 NUDCQ9Y266 331 aa27.73■■■□□ 2.03
SMARCD2-203ENST00000448276 SMG6Q86US8 1419 aaKnown RBP27.73■■■□□ 2.03
SMARCD2-203ENST00000448276 TARBP1Q13395 1621 aaKnown RBP27.71■■■□□ 2.03
SMARCD2-203ENST00000448276 SAMD9Q5K651 1589 aa27.7■■■□□ 2.02
SMARCD2-203ENST00000448276 GCC2Q8IWJ2 1684 aa27.69■■■□□ 2.02
SMARCD2-203ENST00000448276 ZBTB47Q9UFB7 747 aaPredicted RBP27.69■■■□□ 2.02
SMARCD2-203ENST00000448276 SPATA31E1Q6ZUB1 1445 aa27.68■■■□□ 2.02
SMARCD2-203ENST00000448276 ANKRD30BQ9BXX2 1392 aa27.67■■■□□ 2.02
SMARCD2-203ENST00000448276 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
SMARCD2-203ENST00000448276 ARHGEF11O15085 1522 aa27.66■■■□□ 2.02
SMARCD2-203ENST00000448276 TCOF1Q13428 1488 aaKnown RBP27.65■■■□□ 2.02
SMARCD2-203ENST00000448276 NPM2Q86SE8 214 aaKnown RBP27.64■■■□□ 2.02
SMARCD2-203ENST00000448276 SLC4A1APQ9BWU0 796 aaKnown RBP27.63■■■□□ 2.01
SMARCD2-203ENST00000448276 RTL5Q5HYW3 569 aaPredicted RBP27.63■■■□□ 2.01
SMARCD2-203ENST00000448276 DHX29Q7Z478 1369 aaKnown RBP27.63■■■□□ 2.01
SMARCD2-203ENST00000448276 TEX14Q8IWB6 1497 aa27.62■■■□□ 2.01
SMARCD2-203ENST00000448276 RNF123Q5XPI4 1314 aa27.62■■■□□ 2.01
SMARCD2-203ENST00000448276 RPRD2Q5VT52 1461 aaKnown RBP27.62■■■□□ 2.01
SMARCD2-203ENST00000448276 MRC2Q9UBG0 1479 aa27.62■■■□□ 2.01
SMARCD2-203ENST00000448276 ZNF644Q9H582 1327 aaPredicted RBP27.58■■■□□ 2.01
SMARCD2-203ENST00000448276 ANO8Q9HCE9 1232 aaPredicted RBP27.56■■■□□ 2
SMARCD2-203ENST00000448276 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
SMARCD2-203ENST00000448276 CDK13Q14004 1512 aaKnown RBP27.56■■■□□ 2
SMARCD2-203ENST00000448276 PNISRQ8TF01 805 aaKnown RBP27.53■■■□□ 2
SMARCD2-203ENST00000448276 PBRM1Q86U86 1689 aa27.52■■■□□ 2
SMARCD2-203ENST00000448276 IL27Q8NEV9 243 aa27.52■■■□□ 2
SMARCD2-203ENST00000448276 SALL2Q9Y467 1007 aaPredicted RBP27.52■■■□□ 2
SMARCD2-203ENST00000448276 ZNF608Q9ULD9 1512 aaPredicted RBP27.52■■■□□ 2
SMARCD2-203ENST00000448276 TMC1Q8TDI8 760 aa27.52■■■□□ 2
SMARCD2-203ENST00000448276 LAS1LQ9Y4W2 734 aaKnown RBP27.52■■■□□ 2
SMARCD2-203ENST00000448276 RTN4Q9NQC3 1192 aaKnown RBP27.5■■□□□ 1.99
SMARCD2-203ENST00000448276 EXOC6Q8TAG9 804 aa27.49■■□□□ 1.99
SMARCD2-203ENST00000448276 USP47Q96K76 1375 aa27.49■■□□□ 1.99
SMARCD2-203ENST00000448276 EPRSP07814 1512 aaKnown RBP27.48■■□□□ 1.99
SMARCD2-203ENST00000448276 PRKCSHP14314 528 aaPredicted RBP27.48■■□□□ 1.99
SMARCD2-203ENST00000448276 BCORL1Q5H9F3 1711 aa27.47■■□□□ 1.99
SMARCD2-203ENST00000448276 DAPK1P53355 1430 aa27.45■■□□□ 1.99
SMARCD2-203ENST00000448276 MIA2Q96PC5 1412 aa27.45■■□□□ 1.98
SMARCD2-203ENST00000448276 POLR1AO95602 1720 aaPredicted RBP27.44■■□□□ 1.98
SMARCD2-203ENST00000448276 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
SMARCD2-203ENST00000448276 IQGAP2Q13576 1575 aa27.43■■□□□ 1.98
SMARCD2-203ENST00000448276 ABCC5O15440 1437 aa27.43■■□□□ 1.98
SMARCD2-203ENST00000448276 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
SMARCD2-203ENST00000448276 RRP1P56182 461 aaKnown RBP27.4■■□□□ 1.98
SMARCD2-203ENST00000448276 SKAP1Q86WV1 359 aa27.39■■□□□ 1.97
SMARCD2-203ENST00000448276 NEFMP07197 916 aa27.38■■□□□ 1.97
SMARCD2-203ENST00000448276 ERCC6Q03468 1493 aa27.38■■□□□ 1.97
SMARCD2-203ENST00000448276 PDE4AP27815 886 aa27.38■■□□□ 1.97
SMARCD2-203ENST00000448276 ROCK1Q13464 1354 aa27.36■■□□□ 1.97
SMARCD2-203ENST00000448276 WDR62O43379 1518 aa27.34■■□□□ 1.97
SMARCD2-203ENST00000448276 FBLN2P98095 1184 aa27.33■■□□□ 1.97
SMARCD2-203ENST00000448276 PZPP20742 1482 aa27.33■■□□□ 1.97
SMARCD2-203ENST00000448276 PKD2Q13563 968 aa27.32■■□□□ 1.96
SMARCD2-203ENST00000448276 RCAN3Q9UKA8 241 aa27.32■■□□□ 1.96
SMARCD2-203ENST00000448276 TCERG1O14776 1098 aaKnown RBP27.3■■□□□ 1.96
SMARCD2-203ENST00000448276 KDM2AQ9Y2K7 1162 aa27.29■■□□□ 1.96
SMARCD2-203ENST00000448276 CARD11Q9BXL7 1154 aa27.29■■□□□ 1.96
SMARCD2-203ENST00000448276 MBD5Q9P267 1494 aa27.28■■□□□ 1.96
SMARCD2-203ENST00000448276 BACH2Q9BYV9 841 aa27.28■■□□□ 1.96
SMARCD2-203ENST00000448276 PLIN1O60240 522 aa27.28■■□□□ 1.96
SMARCD2-203ENST00000448276 CHMP7Q8WUX9 453 aaPredicted RBP27.27■■□□□ 1.96
SMARCD2-203ENST00000448276 ZNF777Q9ULD5 760 aaPredicted RBP27.27■■□□□ 1.96
SMARCD2-203ENST00000448276 CDCA7LQ96GN5 454 aa27.26■■□□□ 1.96
SMARCD2-203ENST00000448276 LRPPRCP42704 1394 aaKnown RBP27.26■■□□□ 1.96
SMARCD2-203ENST00000448276 ST20-MTHFSA0A0A6YYL1 179 aa27.26■■□□□ 1.95
SMARCD2-203ENST00000448276 DNMT1P26358 1616 aaKnown RBP27.26■■□□□ 1.95
SMARCD2-203ENST00000448276 KDM5CP41229 1560 aa27.24■■□□□ 1.95
SMARCD2-203ENST00000448276 KIF15Q9NS87 1388 aa27.24■■□□□ 1.95
SMARCD2-203ENST00000448276 MYBBP1AQ9BQG0 1328 aaKnown RBP27.23■■□□□ 1.95
SMARCD2-203ENST00000448276 KIAA0586Q9BVV6 1533 aa27.23■■□□□ 1.95
SMARCD2-203ENST00000448276 KIAA1107Q9UPP5 1409 aa27.21■■□□□ 1.95
SMARCD2-203ENST00000448276 EIF4G3O43432 1585 aaKnown RBP27.21■■□□□ 1.95
SMARCD2-203ENST00000448276 GRIN2AQ12879 1464 aa27.2■■□□□ 1.95
SMARCD2-203ENST00000448276 ARID4BQ4LE39 1312 aaPredicted RBP27.19■■□□□ 1.94
SMARCD2-203ENST00000448276 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.19■■□□□ 1.94
SMARCD2-203ENST00000448276 BRD4O60885 1362 aaPredicted RBP27.18■■□□□ 1.94
SMARCD2-203ENST00000448276 DISP1Q96F81 1524 aa27.18■■□□□ 1.94
SMARCD2-203ENST00000448276 SLC4A3P48751 1232 aa27.17■■□□□ 1.94
SMARCD2-203ENST00000448276 ROCK2O75116 1388 aaKnown RBP27.16■■□□□ 1.94
SMARCD2-203ENST00000448276 KIF14Q15058 1648 aa27.16■■□□□ 1.94
SMARCD2-203ENST00000448276 CFDP1Q9UEE9 299 aaPredicted RBP27.16■■□□□ 1.94
SMARCD2-203ENST00000448276 RALBP1Q15311 655 aa27.14■■□□□ 1.93
SMARCD2-203ENST00000448276 CRBNQ96SW2 442 aa27.12■■□□□ 1.93
SMARCD2-203ENST00000448276 KIAA0556O60303 1618 aa27.12■■□□□ 1.93
SMARCD2-203ENST00000448276 MS4A1P11836 297 aa27.11■■□□□ 1.93
SMARCD2-203ENST00000448276 DCAF11Q8TEB1 546 aa27.11■■□□□ 1.93
SMARCD2-203ENST00000448276 USP35Q9P2H5 1018 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms