RNA–Protein interactions for RNA: ENST00000447906.6

OTUD4-201, Transcript of OTU deubiquitinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene OTUD4, Length 3,829 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-201ENST00000447906 ZBTB47Q9UFB7 747 aaPredicted RBP18.55■□□□□ 0.56
OTUD4-201ENST00000447906 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
OTUD4-201ENST00000447906 TIAM1Q13009 1591 aa18.55■□□□□ 0.56
OTUD4-201ENST00000447906 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
OTUD4-201ENST00000447906 ST20-MTHFSA0A0A6YYL1 179 aa18.54■□□□□ 0.56
OTUD4-201ENST00000447906 NCOA2Q15596 1464 aa18.54■□□□□ 0.56
OTUD4-201ENST00000447906 TNNT2P45379 298 aaPredicted RBP18.54■□□□□ 0.56
OTUD4-201ENST00000447906 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
OTUD4-201ENST00000447906 WDR97A6NE52 1622 aa18.53■□□□□ 0.56
OTUD4-201ENST00000447906 KNSTRNQ9Y448 316 aa18.53■□□□□ 0.56
OTUD4-201ENST00000447906 CCDC184Q52MB2 194 aa18.52■□□□□ 0.56
OTUD4-201ENST00000447906 UACAQ9BZF9 1416 aa18.52■□□□□ 0.55
OTUD4-201ENST00000447906 IFT140Q96RY7 1462 aa18.51■□□□□ 0.55
OTUD4-201ENST00000447906 RTN4Q9NQC3 1192 aaKnown RBP18.51■□□□□ 0.55
OTUD4-201ENST00000447906 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
OTUD4-201ENST00000447906 ANKRD30AQ9BXX3 1397 aa18.49■□□□□ 0.55
OTUD4-201ENST00000447906 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
OTUD4-201ENST00000447906 CUL7Q14999 1698 aa18.47■□□□□ 0.55
OTUD4-201ENST00000447906 STAG3Q9UJ98 1225 aa18.46■□□□□ 0.55
OTUD4-201ENST00000447906 ARXQ96QS3 562 aa18.45■□□□□ 0.54
OTUD4-201ENST00000447906 ROCK2O75116 1388 aaKnown RBP18.44■□□□□ 0.54
OTUD4-201ENST00000447906 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
OTUD4-201ENST00000447906 KIF7Q2M1P5 1343 aa18.44■□□□□ 0.54
OTUD4-201ENST00000447906 PCF11O94913 1555 aaKnown RBP18.43■□□□□ 0.54
OTUD4-201ENST00000447906 TMF1P82094 1093 aa18.41■□□□□ 0.54
OTUD4-201ENST00000447906 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
OTUD4-201ENST00000447906 PTPRGP23470 1445 aa18.41■□□□□ 0.54
OTUD4-201ENST00000447906 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
OTUD4-201ENST00000447906 C11orf95C9JLR9 678 aaPredicted RBP18.4■□□□□ 0.54
OTUD4-201ENST00000447906 EIF5BO60841 1220 aaKnown RBP18.4■□□□□ 0.54
OTUD4-201ENST00000447906 USP47Q96K76 1375 aa18.38■□□□□ 0.53
OTUD4-201ENST00000447906 SLC24A1O60721 1099 aa18.38■□□□□ 0.53
OTUD4-201ENST00000447906 ZNF608Q9ULD9 1512 aaPredicted RBP18.38■□□□□ 0.53
OTUD4-201ENST00000447906 RGS3P49796 1198 aa18.38■□□□□ 0.53
OTUD4-201ENST00000447906 CCDC7Q96M83 1385 aa18.38■□□□□ 0.53
OTUD4-201ENST00000447906 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
OTUD4-201ENST00000447906 NAIPQ13075 1403 aa18.37■□□□□ 0.53
OTUD4-201ENST00000447906 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
OTUD4-201ENST00000447906 HFM1A2PYH4 1435 aa18.36■□□□□ 0.53
OTUD4-201ENST00000447906 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
OTUD4-201ENST00000447906 GGT6Q6P531 493 aa18.35■□□□□ 0.53
OTUD4-201ENST00000447906 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
OTUD4-201ENST00000447906 KIAA0586Q9BVV6 1533 aa18.34■□□□□ 0.53
OTUD4-201ENST00000447906 NEFMP07197 916 aa18.34■□□□□ 0.53
OTUD4-201ENST00000447906 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
OTUD4-201ENST00000447906 DEKP35659 375 aaKnown RBP18.33■□□□□ 0.52
OTUD4-201ENST00000447906 IQGAP2Q13576 1575 aa18.32■□□□□ 0.52
OTUD4-201ENST00000447906 PLIN1O60240 522 aa18.32■□□□□ 0.52
OTUD4-201ENST00000447906 FRAT1Q92837 279 aaPredicted RBP18.32■□□□□ 0.52
OTUD4-201ENST00000447906 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
OTUD4-201ENST00000447906 PPM1GO15355 546 aaPredicted RBP18.31■□□□□ 0.52
OTUD4-201ENST00000447906 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.31■□□□□ 0.521e-10■■■□□ 16.5
OTUD4-201ENST00000447906 KIF3BO15066 747 aa18.31■□□□□ 0.52
OTUD4-201ENST00000447906 KTN1Q86UP2 1357 aaKnown RBP18.31■□□□□ 0.52
OTUD4-201ENST00000447906 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
OTUD4-201ENST00000447906 PANK3Q9H999 370 aa18.31■□□□□ 0.52
OTUD4-201ENST00000447906 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
OTUD4-201ENST00000447906 PTPRKQ15262 1439 aa18.3■□□□□ 0.52
OTUD4-201ENST00000447906 CDCA8Q53HL2 280 aa18.3■□□□□ 0.52
OTUD4-201ENST00000447906 NUTM2DQ5VT03 806 aaPredicted RBP18.3■□□□□ 0.52
OTUD4-201ENST00000447906 NOP58Q9Y2X3 529 aaKnown RBP18.3■□□□□ 0.52
OTUD4-201ENST00000447906 EHBP1L1Q8N3D4 1523 aa18.3■□□□□ 0.52
OTUD4-201ENST00000447906 EPRSP07814 1512 aaKnown RBP18.29■□□□□ 0.52
OTUD4-201ENST00000447906 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
OTUD4-201ENST00000447906 RALBP1Q15311 655 aa18.28■□□□□ 0.52
OTUD4-201ENST00000447906 NLRP13Q86W25 1043 aa18.27■□□□□ 0.52
OTUD4-201ENST00000447906 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
OTUD4-201ENST00000447906 RSPH4AQ5TD94 716 aa18.27■□□□□ 0.51
OTUD4-201ENST00000447906 MAPKBP1O60336 1514 aa18.26■□□□□ 0.51
OTUD4-201ENST00000447906 NBPF1Q3BBV0 1214 aa18.26■□□□□ 0.51
OTUD4-201ENST00000447906 ESF1Q9H501 851 aaKnown RBP18.25■□□□□ 0.51
OTUD4-201ENST00000447906 HECW1Q76N89 1606 aa18.24■□□□□ 0.51
OTUD4-201ENST00000447906 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
OTUD4-201ENST00000447906 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
OTUD4-201ENST00000447906 CNTLNQ9NXG0 1405 aa18.24■□□□□ 0.51
OTUD4-201ENST00000447906 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
OTUD4-201ENST00000447906 EXOC6Q8TAG9 804 aa18.23■□□□□ 0.51
OTUD4-201ENST00000447906 STK26Q9P289 416 aa18.23■□□□□ 0.51
OTUD4-201ENST00000447906 KIF15Q9NS87 1388 aa18.22■□□□□ 0.51
OTUD4-201ENST00000447906 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
OTUD4-201ENST00000447906 CCDC144AA2RUR9 1427 aa18.22■□□□□ 0.51
OTUD4-201ENST00000447906 ERICH6BQ5W0A0 696 aa18.22■□□□□ 0.51
OTUD4-201ENST00000447906 SUPT6HQ7KZ85 1726 aaKnown RBP18.21■□□□□ 0.51
OTUD4-201ENST00000447906 SPAG9O60271 1321 aaKnown RBP18.21■□□□□ 0.51
OTUD4-201ENST00000447906 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
OTUD4-201ENST00000447906 U2SURPO15042 1029 aaKnown RBP18.2■□□□□ 0.5
OTUD4-201ENST00000447906 MYBBP1AQ9BQG0 1328 aaKnown RBP18.2■□□□□ 0.5
OTUD4-201ENST00000447906 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
OTUD4-201ENST00000447906 PLEKHG5O94827 1062 aa18.18■□□□□ 0.5
OTUD4-201ENST00000447906 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
OTUD4-201ENST00000447906 CDCA7LQ96GN5 454 aa18.17■□□□□ 0.5
OTUD4-201ENST00000447906 MORC1Q86VD1 984 aa18.16■□□□□ 0.5
OTUD4-201ENST00000447906 AFAP1Q8N556 730 aa18.16■□□□□ 0.5
OTUD4-201ENST00000447906 UPF2Q9HAU5 1272 aaKnown RBP18.16■□□□□ 0.5
OTUD4-201ENST00000447906 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
OTUD4-201ENST00000447906 PLB1Q6P1J6 1458 aa18.16■□□□□ 0.5
OTUD4-201ENST00000447906 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
OTUD4-201ENST00000447906 MLECQ14165 292 aa18.15■□□□□ 0.5
OTUD4-201ENST00000447906 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
OTUD4-201ENST00000447906 POGKQ9P215 609 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms