RNA–Protein interactions for RNA: ENST00000447431.6

SRRM1-203, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-203ENST00000447431 NEUROD2Q15784 382 aa6.48□□□□□ -1.37
SRRM1-203ENST00000447431 CNGB1Q14028 1251 aaPredicted RBP6.47□□□□□ -1.37
SRRM1-203ENST00000447431 RAPGEF2Q9Y4G8 1499 aa6.47□□□□□ -1.37
SRRM1-203ENST00000447431 CUX2O14529 1486 aa6.46□□□□□ -1.37
SRRM1-203ENST00000447431 PABPN1Q86U42 306 aaKnown RBP eCLIP6.46□□□□□ -1.387e-8■□□□□ 9.1
SRRM1-203ENST00000447431 FAM43AQ8N2R8 423 aa6.46□□□□□ -1.38
SRRM1-203ENST00000447431 NAP1L5Q96NT1 182 aaPredicted RBP6.46□□□□□ -1.38
SRRM1-203ENST00000447431 HSP90AA1P07900 732 aaKnown RBP6.45□□□□□ -1.38
SRRM1-203ENST00000447431 PDE4AP27815 886 aa6.45□□□□□ -1.38
SRRM1-203ENST00000447431 BECN1Q14457 450 aa6.45□□□□□ -1.38
SRRM1-203ENST00000447431 WASHC2AQ641Q2 1341 aa6.45□□□□□ -1.38
SRRM1-203ENST00000447431 PRKRIP1Q9H875 184 aaPredicted RBP6.45□□□□□ -1.38
SRRM1-203ENST00000447431 HSPA5P11021 654 aaKnown RBP6.44□□□□□ -1.38
SRRM1-203ENST00000447431 PNNQ9H307 717 aaKnown RBP6.44□□□□□ -1.38
SRRM1-203ENST00000447431 HSP90AA2PQ14568 343 aaPredicted RBP6.44□□□□□ -1.38
SRRM1-203ENST00000447431 UPF2Q9HAU5 1272 aaKnown RBP6.44□□□□□ -1.38
SRRM1-203ENST00000447431 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.44□□□□□ -1.38
SRRM1-203ENST00000447431 WDR97A6NE52 1622 aa6.44□□□□□ -1.38
SRRM1-203ENST00000447431 FHAD1B1AJZ9 1412 aa6.43□□□□□ -1.38
SRRM1-203ENST00000447431 KIF27Q86VH2 1401 aa6.43□□□□□ -1.38
SRRM1-203ENST00000447431 ANP32BQ92688 251 aaKnown RBP6.43□□□□□ -1.38
SRRM1-203ENST00000447431 BRPF3Q9ULD4 1205 aa6.43□□□□□ -1.38
SRRM1-203ENST00000447431 WASHC2CQ9Y4E1 1318 aa6.42□□□□□ -1.38
SRRM1-203ENST00000447431 SMARCA2P51531 1590 aa6.42□□□□□ -1.38
SRRM1-203ENST00000447431 NFKBIBQ15653 356 aa6.41□□□□□ -1.38
SRRM1-203ENST00000447431 TRIM44Q96DX7 344 aaPredicted RBP6.41□□□□□ -1.38
SRRM1-203ENST00000447431 CNTLNQ9NXG0 1405 aa6.41□□□□□ -1.38
SRRM1-203ENST00000447431 SMG6Q86US8 1419 aaKnown RBP6.4□□□□□ -1.38
SRRM1-203ENST00000447431 EIF4G1Q04637 1599 aaKnown RBP6.4□□□□□ -1.38
SRRM1-203ENST00000447431 PDE3BQ13370 1112 aa6.4□□□□□ -1.38
SRRM1-203ENST00000447431 ERICH3Q5RHP9 1530 aa6.4□□□□□ -1.39
SRRM1-203ENST00000447431 LMOD2Q6P5Q4 547 aa6.39□□□□□ -1.39
SRRM1-203ENST00000447431 FRAT1Q92837 279 aaPredicted RBP6.39□□□□□ -1.39
SRRM1-203ENST00000447431 BACH2Q9BYV9 841 aa6.39□□□□□ -1.39
SRRM1-203ENST00000447431 RCAN3Q9UKA8 241 aa6.39□□□□□ -1.39
SRRM1-203ENST00000447431 ARHGAP35Q9NRY4 1499 aa6.39□□□□□ -1.39
SRRM1-203ENST00000447431 BRPF1P55201 1214 aaPredicted RBP6.39□□□□□ -1.39
SRRM1-203ENST00000447431 MTUS2Q5JR59 1369 aa6.39□□□□□ -1.39
SRRM1-203ENST00000447431 RRP9O43818 475 aaKnown RBP6.38□□□□□ -1.39
SRRM1-203ENST00000447431 RRP1P56182 461 aaKnown RBP6.38□□□□□ -1.39
SRRM1-203ENST00000447431 MAPKBP1O60336 1514 aa6.37□□□□□ -1.39
SRRM1-203ENST00000447431 FMN1Q68DA7 1419 aa6.37□□□□□ -1.39
SRRM1-203ENST00000447431 ARAP1Q96P48 1450 aa6.37□□□□□ -1.39
SRRM1-203ENST00000447431 UACAQ9BZF9 1416 aa6.37□□□□□ -1.39
SRRM1-203ENST00000447431 PROM2Q8N271 834 aa6.37□□□□□ -1.39
SRRM1-203ENST00000447431 SMARCA4P51532 1647 aa6.36□□□□□ -1.39
SRRM1-203ENST00000447431 MKRN4PQ13434 485 aaPredicted RBP6.36□□□□□ -1.39
SRRM1-203ENST00000447431 P3H3Q8IVL6 736 aa6.36□□□□□ -1.39
SRRM1-203ENST00000447431 GOLGA6L3A6NEY3 463 aa6.36□□□□□ -1.39
SRRM1-203ENST00000447431 ZNF326Q5BKZ1 582 aaKnown RBP6.36□□□□□ -1.39
SRRM1-203ENST00000447431 DNAJC5Q9H3Z4 198 aa6.36□□□□□ -1.39
SRRM1-203ENST00000447431 CCDC7Q96M83 1385 aa6.36□□□□□ -1.39
SRRM1-203ENST00000447431 NCLP19338 710 aaKnown RBP6.36□□□□□ -1.39
SRRM1-203ENST00000447431 FAM161AQ3B820 660 aa6.36□□□□□ -1.39
SRRM1-203ENST00000447431 ROCK2O75116 1388 aaKnown RBP6.35□□□□□ -1.39
SRRM1-203ENST00000447431 ZBTB7CA1YPR0 619 aa6.35□□□□□ -1.39
SRRM1-203ENST00000447431 TNNT2P45379 298 aaPredicted RBP6.35□□□□□ -1.39
SRRM1-203ENST00000447431 EXOC6Q8TAG9 804 aa6.35□□□□□ -1.39
SRRM1-203ENST00000447431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.35□□□□□ -1.39
SRRM1-203ENST00000447431 CCDC18Q5T9S5 1454 aa6.35□□□□□ -1.39
SRRM1-203ENST00000447431 AKNAQ7Z591 1439 aa6.34□□□□□ -1.39
SRRM1-203ENST00000447431 RALBP1Q15311 655 aa6.34□□□□□ -1.39
SRRM1-203ENST00000447431 CCDC9Q9Y3X0 531 aaKnown RBP6.34□□□□□ -1.39
SRRM1-203ENST00000447431 MAP3K1Q13233 1512 aa6.34□□□□□ -1.39
SRRM1-203ENST00000447431 CENPQQ7L2Z9 268 aaPredicted RBP6.34□□□□□ -1.39
SRRM1-203ENST00000447431 U3KPZ7 1027 aaPredicted RBP6.34□□□□□ -1.39
SRRM1-203ENST00000447431 PRXQ9BXM0 1461 aa6.34□□□□□ -1.4
SRRM1-203ENST00000447431 LRRC9Q6ZRR7 1453 aa6.33□□□□□ -1.4
SRRM1-203ENST00000447431 CANXP27824 592 aaKnown RBP6.33□□□□□ -1.4
SRRM1-203ENST00000447431 ZMYND15Q9H091 742 aa6.33□□□□□ -1.4
SRRM1-203ENST00000447431 MYH16Q9H6N6 1097 aa6.33□□□□□ -1.4
SRRM1-203ENST00000447431 WDR70Q9NW82 654 aa6.33□□□□□ -1.4
SRRM1-203ENST00000447431 ARID4BQ4LE39 1312 aaPredicted RBP6.33□□□□□ -1.4
SRRM1-203ENST00000447431 PHLDB1Q86UU1 1377 aa6.32□□□□□ -1.4
SRRM1-203ENST00000447431 RGS3P49796 1198 aa6.32□□□□□ -1.4
SRRM1-203ENST00000447431 L3MBTL2Q969R5 705 aa6.32□□□□□ -1.4
SRRM1-203ENST00000447431 RRP7BPQ9NSQ0 103 aa6.32□□□□□ -1.4
SRRM1-203ENST00000447431 SYNJ1O43426 1573 aa6.32□□□□□ -1.4
SRRM1-203ENST00000447431 FRAT2O75474 233 aaPredicted RBP6.31□□□□□ -1.4
SRRM1-203ENST00000447431 PLEKHG5O94827 1062 aa6.31□□□□□ -1.4
SRRM1-203ENST00000447431 HS6ST3Q8IZP7 471 aa6.31□□□□□ -1.4
SRRM1-203ENST00000447431 PTMSP20962 102 aa6.31□□□□□ -1.4
SRRM1-203ENST00000447431 SLC4A3P48751 1232 aa6.31□□□□□ -1.4
SRRM1-203ENST00000447431 CCDC184Q52MB2 194 aa6.31□□□□□ -1.4
SRRM1-203ENST00000447431 CHIC2Q9UKJ5 165 aa6.31□□□□□ -1.4
SRRM1-203ENST00000447431 KTN1Q86UP2 1357 aaKnown RBP6.31□□□□□ -1.4
SRRM1-203ENST00000447431 TPM2P07951 284 aa6.31□□□□□ -1.4
SRRM1-203ENST00000447431 RNF123Q5XPI4 1314 aa6.31□□□□□ -1.4
SRRM1-203ENST00000447431 MAP7D2Q96T17 732 aa6.3□□□□□ -1.4
SRRM1-203ENST00000447431 ISY1Q9ULR0 285 aaKnown RBP6.3□□□□□ -1.4
SRRM1-203ENST00000447431 TIAM1Q13009 1591 aa6.3□□□□□ -1.4
SRRM1-203ENST00000447431 GOLGA6L22H0YM25 854 aa6.3□□□□□ -1.4
SRRM1-203ENST00000447431 TRHP20396 242 aaPredicted RBP6.3□□□□□ -1.4
SRRM1-203ENST00000447431 KIF15Q9NS87 1388 aa6.3□□□□□ -1.4
SRRM1-203ENST00000447431 STK25O00506 426 aa6.3□□□□□ -1.4
SRRM1-203ENST00000447431 MSNP26038 577 aaKnown RBP6.3□□□□□ -1.4
SRRM1-203ENST00000447431 NLRP13Q86W25 1043 aa6.3□□□□□ -1.4
SRRM1-203ENST00000447431 KIF7Q2M1P5 1343 aa6.3□□□□□ -1.4
SRRM1-203ENST00000447431 MYBBP1AQ9BQG0 1328 aaKnown RBP6.3□□□□□ -1.4
SRRM1-203ENST00000447431 WDR43Q15061 677 aaKnown RBP eCLIP6.29□□□□□ -1.49e-8■■□□□ 12.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms