RNA–Protein interactions for RNA: ENST00000447384.1

AP001604.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP001604.1, Length 954 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001604.1-201ENST00000447384 BMP2KQ9NSY1 1161 aaPredicted RBP9.79□□□□□ -0.84
AP001604.1-201ENST00000447384 POTEFA5A3E0 1075 aa9.78□□□□□ -0.84
AP001604.1-201ENST00000447384 TTLL13PA6NNM8 815 aa9.78□□□□□ -0.84
AP001604.1-201ENST00000447384 SPRYD3Q8NCJ5 442 aa9.78□□□□□ -0.84
AP001604.1-201ENST00000447384 NKX1-1Q15270 411 aaPredicted RBP9.76□□□□□ -0.85
AP001604.1-201ENST00000447384 MKRN3Q13064 507 aaKnown RBP9.75□□□□□ -0.85
AP001604.1-201ENST00000447384 EFCAB3Q8N7B9 438 aa9.75□□□□□ -0.85
AP001604.1-201ENST00000447384 TRIM35Q9UPQ4 493 aa9.74□□□□□ -0.85
AP001604.1-201ENST00000447384 RYDENQ9NUL5 291 aaKnown RBP9.73□□□□□ -0.85
AP001604.1-201ENST00000447384 SOX12O15370 315 aa9.71□□□□□ -0.86
AP001604.1-201ENST00000447384 CADPSQ9ULU8 1353 aa9.7□□□□□ -0.86
AP001604.1-201ENST00000447384 CFTRP13569 1480 aa9.7□□□□□ -0.86
AP001604.1-201ENST00000447384 GTPBP6O43824 516 aaPredicted RBP9.69□□□□□ -0.86
AP001604.1-201ENST00000447384 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
AP001604.1-201ENST00000447384 NLRP6P59044 892 aa9.69□□□□□ -0.86
AP001604.1-201ENST00000447384 SLC24A1O60721 1099 aa9.68□□□□□ -0.86
AP001604.1-201ENST00000447384 MFRPQ9BY79 579 aa9.68□□□□□ -0.86
AP001604.1-201ENST00000447384 PHF8Q9UPP1 1060 aa9.68□□□□□ -0.86
AP001604.1-201ENST00000447384 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.66□□□□□ -0.86
AP001604.1-201ENST00000447384 COLQQ9Y215 455 aaPredicted RBP9.66□□□□□ -0.86
AP001604.1-201ENST00000447384 SEC24BO95487 1268 aa9.63□□□□□ -0.87
AP001604.1-201ENST00000447384 ST18O60284 1047 aa9.62□□□□□ -0.87
AP001604.1-201ENST00000447384 MMRN1Q13201 1228 aa9.62□□□□□ -0.87
AP001604.1-201ENST00000447384 IER5LQ5T953 404 aa9.62□□□□□ -0.87
AP001604.1-201ENST00000447384 FBXO22Q8NEZ5 403 aa9.62□□□□□ -0.87
AP001604.1-201ENST00000447384 PLCG2P16885 1265 aa9.59□□□□□ -0.87
AP001604.1-201ENST00000447384 SPNS2Q8IVW8 549 aa9.58□□□□□ -0.88
AP001604.1-201ENST00000447384 MS4A4AQ96JQ5 239 aa9.58□□□□□ -0.88
AP001604.1-201ENST00000447384 OCEL1Q9H607 264 aa9.58□□□□□ -0.88
AP001604.1-201ENST00000447384 LAMC3Q9Y6N6 1575 aa9.58□□□□□ -0.88
AP001604.1-201ENST00000447384 IRX5P78411 483 aaPredicted RBP9.57□□□□□ -0.88
AP001604.1-201ENST00000447384 SLAIN1Q8ND83 568 aa9.57□□□□□ -0.88
AP001604.1-201ENST00000447384 TSHZ2Q9NRE2 1034 aa9.57□□□□□ -0.88
AP001604.1-201ENST00000447384 PPP1R37O75864 691 aa9.56□□□□□ -0.88
AP001604.1-201ENST00000447384 NESP48681 1621 aa9.55□□□□□ -0.88
AP001604.1-201ENST00000447384 PDS5BQ9NTI5 1447 aa9.55□□□□□ -0.88
AP001604.1-201ENST00000447384 ILDR1Q86SU0 546 aaPredicted RBP9.54□□□□□ -0.88
AP001604.1-201ENST00000447384 G3V3G9 751 aa9.53□□□□□ -0.88
AP001604.1-201ENST00000447384 DPY19L2Q6NUT2 758 aa9.53□□□□□ -0.88
AP001604.1-201ENST00000447384 PDCD7Q8N8D1 485 aaKnown RBP9.53□□□□□ -0.88
AP001604.1-201ENST00000447384 WRNQ14191 1432 aaPredicted RBP eCLIP9.53□□□□□ -0.88
AP001604.1-201ENST00000447384 FANCD2Q9BXW9 1451 aa9.53□□□□□ -0.88
AP001604.1-201ENST00000447384 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
AP001604.1-201ENST00000447384 VSIG10Q8N0Z9 540 aa9.49□□□□□ -0.89
AP001604.1-201ENST00000447384 L3MBTL3Q96JM7 780 aaPredicted RBP9.48□□□□□ -0.89
AP001604.1-201ENST00000447384 ABCC8Q09428 1581 aa9.48□□□□□ -0.89
AP001604.1-201ENST00000447384 BOLA1Q9Y3E2 137 aa9.47□□□□□ -0.89
AP001604.1-201ENST00000447384 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
AP001604.1-201ENST00000447384 MICALL2Q8IY33 904 aa9.45□□□□□ -0.9
AP001604.1-201ENST00000447384 CUX1P39880 1505 aa9.45□□□□□ -0.9
AP001604.1-201ENST00000447384 PRDM2Q13029 1718 aa9.45□□□□□ -0.9
AP001604.1-201ENST00000447384 CADPS2Q86UW7 1296 aa9.44□□□□□ -0.9
AP001604.1-201ENST00000447384 TOP2BQ02880 1626 aa9.44□□□□□ -0.9
AP001604.1-201ENST00000447384 SYNJ1O43426 1573 aa9.42□□□□□ -0.9
AP001604.1-201ENST00000447384 KDM2AQ9Y2K7 1162 aa9.42□□□□□ -0.9
AP001604.1-201ENST00000447384 SNPHO15079 494 aa9.41□□□□□ -0.9
AP001604.1-201ENST00000447384 BIVM-ERCC5R4GMW8 1640 aa9.41□□□□□ -0.9
AP001604.1-201ENST00000447384 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
AP001604.1-201ENST00000447384 TOPBP1Q92547 1522 aa9.41□□□□□ -0.9
AP001604.1-201ENST00000447384 WDR70Q9NW82 654 aa9.4□□□□□ -0.9
AP001604.1-201ENST00000447384 DNMBPQ6XZF7 1577 aa9.4□□□□□ -0.9
AP001604.1-201ENST00000447384 MRC2Q9UBG0 1479 aa9.4□□□□□ -0.91
AP001604.1-201ENST00000447384 PDE4AP27815 886 aa9.39□□□□□ -0.91
AP001604.1-201ENST00000447384 C3orf67Q6ZVT6 689 aa9.39□□□□□ -0.91
AP001604.1-201ENST00000447384 MARVELD3Q96A59 401 aa9.39□□□□□ -0.91
AP001604.1-201ENST00000447384 EEA1Q15075 1411 aa9.37□□□□□ -0.91
AP001604.1-201ENST00000447384 ERCC6Q03468 1493 aa9.36□□□□□ -0.91
AP001604.1-201ENST00000447384 FGD5Q6ZNL6 1462 aa9.36□□□□□ -0.91
AP001604.1-201ENST00000447384 TMC2Q8TDI7 906 aa9.36□□□□□ -0.91
AP001604.1-201ENST00000447384 LARP6Q9BRS8 491 aaKnown RBP9.36□□□□□ -0.91
AP001604.1-201ENST00000447384 SOGA1O94964 1423 aa9.36□□□□□ -0.91
AP001604.1-201ENST00000447384 WDR62O43379 1518 aa9.36□□□□□ -0.91
AP001604.1-201ENST00000447384 NCKAP5LQ9HCH0 1330 aa9.35□□□□□ -0.91
AP001604.1-201ENST00000447384 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
AP001604.1-201ENST00000447384 KIF21AQ7Z4S6 1674 aa9.35□□□□□ -0.91
AP001604.1-201ENST00000447384 CRISPLD2Q9H0B8 497 aa9.34□□□□□ -0.91
AP001604.1-201ENST00000447384 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.34□□□□□ -0.91
AP001604.1-201ENST00000447384 RUSC2Q8N2Y8 1516 aa9.32□□□□□ -0.92
AP001604.1-201ENST00000447384 ABCA10Q8WWZ4 1543 aa9.32□□□□□ -0.92
AP001604.1-201ENST00000447384 DDX27Q96GQ7 796 aaKnown RBP9.32□□□□□ -0.92
AP001604.1-201ENST00000447384 GPHNQ9NQX3 736 aaPredicted RBP9.32□□□□□ -0.92
AP001604.1-201ENST00000447384 CUX2O14529 1486 aa9.32□□□□□ -0.92
AP001604.1-201ENST00000447384 KIF27Q86VH2 1401 aa9.31□□□□□ -0.92
AP001604.1-201ENST00000447384 RAD54L2Q9Y4B4 1467 aa9.31□□□□□ -0.92
AP001604.1-201ENST00000447384 THOC2Q8NI27 1593 aaKnown RBP9.3□□□□□ -0.92
AP001604.1-201ENST00000447384 IGF1RP08069 1367 aa9.3□□□□□ -0.92
AP001604.1-201ENST00000447384 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
AP001604.1-201ENST00000447384 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
AP001604.1-201ENST00000447384 C2orf72A6NCS6 295 aa9.29□□□□□ -0.92
AP001604.1-201ENST00000447384 EMP3P54852 163 aa9.29□□□□□ -0.92
AP001604.1-201ENST00000447384 IFT140Q96RY7 1462 aa9.28□□□□□ -0.92
AP001604.1-201ENST00000447384 MFSD10Q14728 455 aa9.28□□□□□ -0.92
AP001604.1-201ENST00000447384 PPP1R15BQ5SWA1 713 aa9.28□□□□□ -0.92
AP001604.1-201ENST00000447384 TMEM92Q6UXU6 159 aa9.28□□□□□ -0.92
AP001604.1-201ENST00000447384 FAM9AQ8IZU1 332 aaPredicted RBP9.28□□□□□ -0.92
AP001604.1-201ENST00000447384 KIF3CO14782 793 aa9.26□□□□□ -0.93
AP001604.1-201ENST00000447384 DSG2Q14126 1118 aa9.26□□□□□ -0.93
AP001604.1-201ENST00000447384 E2F4Q16254 413 aa9.26□□□□□ -0.93
AP001604.1-201ENST00000447384 P3H3Q8IVL6 736 aa9.26□□□□□ -0.93
AP001604.1-201ENST00000447384 TARBP1Q13395 1621 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms