RNA–Protein interactions for RNA: ENST00000445177.5

SIK3-204, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 5

Gene SIK3, Length 6,331 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-204ENST00000445177 CDCA8Q53HL2 280 aa17.45■□□□□ 0.38
SIK3-204ENST00000445177 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
SIK3-204ENST00000445177 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
SIK3-204ENST00000445177 PHLDB1Q86UU1 1377 aa17.43■□□□□ 0.38
SIK3-204ENST00000445177 CCDC18Q5T9S5 1454 aa17.43■□□□□ 0.38
SIK3-204ENST00000445177 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
SIK3-204ENST00000445177 CFAP53Q96M91 514 aa17.42■□□□□ 0.38
SIK3-204ENST00000445177 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
SIK3-204ENST00000445177 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
SIK3-204ENST00000445177 ARAP1Q96P48 1450 aa17.4■□□□□ 0.38
SIK3-204ENST00000445177 TIMELESSQ9UNS1 1208 aa17.39■□□□□ 0.38
SIK3-204ENST00000445177 CUX1P39880 1505 aa17.39■□□□□ 0.37
SIK3-204ENST00000445177 RGS3P49796 1198 aa17.38■□□□□ 0.37
SIK3-204ENST00000445177 SPAG9O60271 1321 aaKnown RBP17.36■□□□□ 0.37
SIK3-204ENST00000445177 CFTRP13569 1480 aa17.35■□□□□ 0.37
SIK3-204ENST00000445177 PTPRGP23470 1445 aa17.35■□□□□ 0.37
SIK3-204ENST00000445177 MAPK8IP3Q9UPT6 1336 aa17.35■□□□□ 0.37
SIK3-204ENST00000445177 MORC1Q86VD1 984 aa17.34■□□□□ 0.37
SIK3-204ENST00000445177 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
SIK3-204ENST00000445177 FTSJ3Q8IY81 847 aaKnown RBP17.33■□□□□ 0.36
SIK3-204ENST00000445177 CCER2I3L3R5 266 aa17.33■□□□□ 0.36
SIK3-204ENST00000445177 CYB5RLQ6IPT4 315 aa17.32■□□□□ 0.36
SIK3-204ENST00000445177 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
SIK3-204ENST00000445177 PPP4R2Q9NY27 417 aa17.31■□□□□ 0.36
SIK3-204ENST00000445177 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
SIK3-204ENST00000445177 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
SIK3-204ENST00000445177 NUTM2FA1L443 756 aa17.3■□□□□ 0.36
SIK3-204ENST00000445177 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
SIK3-204ENST00000445177 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
SIK3-204ENST00000445177 WASHC2CQ9Y4E1 1318 aa17.28■□□□□ 0.36
SIK3-204ENST00000445177 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
SIK3-204ENST00000445177 TRAK1Q9UPV9 953 aa17.28■□□□□ 0.36
SIK3-204ENST00000445177 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
SIK3-204ENST00000445177 FGD6Q6ZV73 1430 aa17.27■□□□□ 0.36
SIK3-204ENST00000445177 NUDCQ9Y266 331 aa17.26■□□□□ 0.35
SIK3-204ENST00000445177 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
SIK3-204ENST00000445177 TOPBP1Q92547 1522 aa17.23■□□□□ 0.35
SIK3-204ENST00000445177 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
SIK3-204ENST00000445177 NCOA2Q15596 1464 aa17.22■□□□□ 0.35
SIK3-204ENST00000445177 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
SIK3-204ENST00000445177 MYOM3Q5VTT5 1437 aa17.21■□□□□ 0.35
SIK3-204ENST00000445177 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
SIK3-204ENST00000445177 U2AF1L5P0DN76 240 aaPredicted RBP17.19■□□□□ 0.34
SIK3-204ENST00000445177 U2AF1Q01081 240 aaKnown RBP eCLIP17.19■□□□□ 0.34
SIK3-204ENST00000445177 PANK3Q9H999 370 aa17.19■□□□□ 0.34
SIK3-204ENST00000445177 CCDC144AA2RUR9 1427 aa17.19■□□□□ 0.34
SIK3-204ENST00000445177 PRXQ9BXM0 1461 aa17.18■□□□□ 0.34
SIK3-204ENST00000445177 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.18■□□□□ 0.348e-7■■■□□ 14.8
SIK3-204ENST00000445177 CASKIN1Q8WXD9 1431 aa17.17■□□□□ 0.34
SIK3-204ENST00000445177 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
SIK3-204ENST00000445177 RRP7AQ9Y3A4 280 aaKnown RBP17.17■□□□□ 0.34
SIK3-204ENST00000445177 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
SIK3-204ENST00000445177 USP47Q96K76 1375 aa17.15■□□□□ 0.34
SIK3-204ENST00000445177 GRIN2BQ13224 1484 aa17.14■□□□□ 0.34
SIK3-204ENST00000445177 RCAN3Q9UKA8 241 aa17.14■□□□□ 0.33
SIK3-204ENST00000445177 RALBP1Q15311 655 aa17.13■□□□□ 0.33
SIK3-204ENST00000445177 APBB1O00213 710 aa17.13■□□□□ 0.33
SIK3-204ENST00000445177 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
SIK3-204ENST00000445177 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
SIK3-204ENST00000445177 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
SIK3-204ENST00000445177 AFAP1Q8N556 730 aa17.12■□□□□ 0.33
SIK3-204ENST00000445177 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
SIK3-204ENST00000445177 SNAPC4Q5SXM2 1469 aa17.11■□□□□ 0.33
SIK3-204ENST00000445177 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
SIK3-204ENST00000445177 MRC2Q9UBG0 1479 aa17.11■□□□□ 0.33
SIK3-204ENST00000445177 PLIN1O60240 522 aa17.11■□□□□ 0.33
SIK3-204ENST00000445177 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
SIK3-204ENST00000445177 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
SIK3-204ENST00000445177 PRKRIP1Q9H875 184 aaPredicted RBP17.1■□□□□ 0.33
SIK3-204ENST00000445177 TAOK2Q9UL54 1235 aa17.1■□□□□ 0.33
SIK3-204ENST00000445177 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
SIK3-204ENST00000445177 FYCO1Q9BQS8 1478 aa17.07■□□□□ 0.32
SIK3-204ENST00000445177 CDK13Q14004 1512 aaKnown RBP17.07■□□□□ 0.32
SIK3-204ENST00000445177 RRBP1Q9P2E9 1410 aaKnown RBP17.06■□□□□ 0.32
SIK3-204ENST00000445177 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
SIK3-204ENST00000445177 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
SIK3-204ENST00000445177 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
SIK3-204ENST00000445177 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
SIK3-204ENST00000445177 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
SIK3-204ENST00000445177 DDRGK1Q96HY6 314 aa17.04■□□□□ 0.32
SIK3-204ENST00000445177 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
SIK3-204ENST00000445177 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
SIK3-204ENST00000445177 BCL2L13Q9BXK5 485 aa17.04■□□□□ 0.32
SIK3-204ENST00000445177 ARHGAP5Q13017 1502 aa17.04■□□□□ 0.32
SIK3-204ENST00000445177 KIF7Q2M1P5 1343 aa17.04■□□□□ 0.32
SIK3-204ENST00000445177 NLRP13Q86W25 1043 aa17.03■□□□□ 0.32
SIK3-204ENST00000445177 FAM69CQ0P6D2 419 aa17.03■□□□□ 0.32
SIK3-204ENST00000445177 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
SIK3-204ENST00000445177 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
SIK3-204ENST00000445177 BECN1Q14457 450 aa17.03■□□□□ 0.32
SIK3-204ENST00000445177 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
SIK3-204ENST00000445177 TMEM132EQ6IEE7 984 aa17.02■□□□□ 0.32
SIK3-204ENST00000445177 ITPRIPQ8IWB1 547 aa17.02■□□□□ 0.31
SIK3-204ENST00000445177 WASHC2AQ641Q2 1341 aa17.02■□□□□ 0.31
SIK3-204ENST00000445177 ANP32BQ92688 251 aaKnown RBP17.02■□□□□ 0.31
SIK3-204ENST00000445177 TSHZ2Q9NRE2 1034 aa17.02■□□□□ 0.31
SIK3-204ENST00000445177 NCLP19338 710 aaKnown RBP17.01■□□□□ 0.31
SIK3-204ENST00000445177 NOP58Q9Y2X3 529 aaKnown RBP17.01■□□□□ 0.31
SIK3-204ENST00000445177 MYBBP1AQ9BQG0 1328 aaKnown RBP17.01■□□□□ 0.31
SIK3-204ENST00000445177 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms